Template:Macroape 1083: Difference between revisions
From FANTOM5_SSTAR
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== | == Sample specificity == | ||
{{#info:The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon}} | {{#info:The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon}} | ||
<html> | <html> | ||
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<table id="tfbs_overexpression_table"></table> | <table id="tfbs_overexpression_table"></table> | ||
</html> | </html> | ||
== TomTom analysis == | |||
{{#info: <br>Analyst: Michiel de Hoon and Hiroko Ohmiya}} | |||
{{#if: {{#pos:{{{tomtom_result}}}|;}} | | |||
<html> | |||
<script type="text/javascript"> | |||
$(document).ready(function() { | |||
$('#tomtom_results').dataTable({ | |||
"sScrollY": "300px", | |||
"bPaginate": false, | |||
"bScrollCollapse": true, | |||
"iDisplayLength": -1, | |||
"aaSorting": [[2,'asc']], | |||
"aoColumnDefs": [{"fnRender": function ( o, val ) {var elem = o.aData[0].split("#"); return "<a href=\"http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?ID="+elem[1]+"&rm=present&collection=CORE\">"+elem[0]+"</a>";}, "aTargets": [ 0 ]}, { "sWidth": "150px", "sType": "numeric", "aTargets": [2,3,4] }] | |||
}); | |||
}); | |||
</script> | |||
</html> | |||
<table id="tomtom_results"><html><thead></html> | |||
<tr><th>Target ID</th><th><span class="rotate90"><p>Optimal_offset</p></span></th><th style="text-align:left;"><div style="-webkit-transform: rotate(-90deg);-webkit-transform-origin: left;">p-value</div></th><th>E-value</th><th>q-value</th><th><div class="rotate90"><p>Overlap</p></div></th><th>Query consensus</th><th>Target consensus</th><th><div class="rotate90"><p>Orientation</p></div></th></tr><html></thead><tbody></html> | |||
{{#arraymap:{{{tomtom_result}}}|!|$ | |||
|<tr><td>{{#replace:$|;|</td><td>}}</td></tr> | |||
|}} | |||
<html></tbody></html></table> | |||
}} | |||
{{#arraymap:{{{macroape_1083_sample_pvalues}}}|!|$ | {{#arraymap:{{{macroape_1083_sample_pvalues}}}|!|$ | ||
Revision as of 11:28, 7 September 2012
Full Name: {{{name}}}
| Motif matrix | |
|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
