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MacroAPE 1083:CNhs11725 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;516.1828102813329;1313.30369289302;575.4071827826203;486.6543861523911!2;500.97746792735825;935.3847948113222;6.621658951903312;1448.5641504...")
 
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;0.0685601!11681-122H7;0.132042!11216-116B1;0.0563633!12179-129A1;0.782482!12180-129A2;0.317505!12181-129A3;0.326217!12176-128I7;0.265618!12177-128I8;0.493286!12182-129A4;0.316119!12183-129A5;0.388057!12184-129A6;0.588754!10809-111A8;0.406206!10597-108E3;0.0427533!10717-109I6;0.00908772!10455-106G5;0.0767421!10534-107G3;0.0289543!10429-106D6;0.00573844!10464-106H5;0.00215271!10827-111C8;0.00226822!10789-110H6;0.270818!10828-111C9;0.138177!10788-110H5;0.116552!10792-110H9;0.0503236!10765-110E9;0.0569453!10829-111D1;0.193914!10830-111D2;0.117431!10831-111D3;0.00817952!10832-111D4;0.0508366!10833-111D5;0.0346472!10764-110E8;0.0929038!10770-110F5;0.0154958!10399-106A3;0.120022!10400-106A4;0.0968974!10405-106A9;0.0716258!10834-111D6;0.0503734!10835-111D7;0.181024!10836-111D8;0.0155948!10837-111D9;0.029162!10699-109G6;0.151488!10802-111A1;0.0507538!10796-110I4;0.0388123!10010-101C1;0.130699!10810-111A9;0.000928115!10421-106C7;0.00199032!10708-109H6;0.0837633!12235-129G3;0.00626998!12236-129G4;0.46148!12237-129G5;0.666522!10167-103B5;0.836104!10151-102I7;0.35169!10428-106D5;0.489042!10795-110I3;0.0475502!10805-111A4;0.0751325!10052-101G7;0.00249278!10189-103D9;0.0020345!10589-108D4;0.0019863!10425-106D2;0.0205809!10427-106D4;0.00223003!10702-109G9;0.0126712!10432-106D9;0.00348879!10496-107C1;0.0381233!10718-109I7;0.480962!10011-101C2;0.228322!10053-101G8;0.00649547!10686-109F2;0.930082!10084-102B3;0.610463!10012-101C3;0.702815!10085-102B4;0.789473!10482-107A5;0.168651!10419-106C5;0.00651892!10080-102A8;0.00197535!10760-110E4;0.00421676!10709-109H7;0.490636!10710-109H8;0.240294!10703-109H1;0.0534584!10719-109I8;0.0126404!10642-109A3;0.00500641!10177-103C6;0.00162527!10164-103B2;0.782742!10173-103C2;0.641393!10166-103B4;0.0996939!10083-102B2;0.267545!10188-103D8;0.247479!10552-107I3;0.886519!10553-107I4;0.0230195!10013-101C4;0.0424241!10536-107G5;0.00736969!10618-108G6;0.108702!10423-106C9;0.029606!10785-110H2;0.0205927!12238-129G6;0.0260584!12239-129G7;0.0106592!12240-129G8;0.00197425!10416-106C2;0.0142484!10801-110I9;0.00760384!10766-110F1;0.0685398!10824-111C5;0.0243903!10825-111C6;0.0301856!10826-111C7;0.0302172!10454-106G4;0.0333979!10409-106B4;0.0192372!10638-108I8;0.0211662!10636-108I6;0.0427783!10513-107D9;0.125024!10420-106C6;0.00949099!10082-102B1;0.000496489!10014-101C5;0.0120388!10070-101I7;0.00360076!10452-106G2;0.00799983!10453-106G3;0.00591964!10449-106F8;0.00214916!10042-101F6;0.00166689!10069-101I6;0.841594!10193-103E4;0.00216005!10631-108I1;0.647939!10438-106E6;0.00959442!10488-107B2;0.0629416!10196-103E7;0.0198955!10071-101I8;0.0633887!10071-101I8;0.0133284!10041-101F5;0.117499!10451-106G1;0.00504569!10450-106F9;0.000804393!10604-108F1;0.000324885!10605-108F2;0.0711817!10606-108F3;0.153559!10603-108E9;0.0479033!10497-107C2;0.114623!10448-106F7;0.738614!10643-109A4;0.0131533!10426-106D3;0.0306692!10431-106D8;0.167584!10197-103E8;0.0674007!10443-106F2;0.0032474!10815-111B5;0.571918!10816-111B6;0.0353948!10817-111B7;0.0230298!10015-101C6;0.04287!10410-106B5;0.00134308!10054-101G9;0.000221916!10758-110E2;0.0186235!10711-109H9;0.171385!10040-101F4;0.0883199!10470-106I2;0.352502!10415-106C1;0.00290385!10198-103E9;0.623339!10614-108G2;0.00216133!10612-108F9;0.036266!10549-107H9;0.0846629!10615-108G3;0.000659454!10487-107B1;0.00036005!10433-106E1;0.0554991!10688-109F4;0.01948!10444-106F3;0.229655!10444-106F3;0.104169!10485-107A8;0.100366!10413-106B8;0.0571375!10175-103C4;0.0950379!10161-103A8;0.595606!12131-128D7;0.788375!10624-108H3;0.0216883!10712-109I1;0.230889!10205-103F7;0.00871946!10206-103F8;0.00600999!10207-103F9;0.0136979!10050-101G5;0.0118888!10051-101G6;0.00682385!10016-101C7;0.0121592!10046-101G1;0.00816857!10778-110G4;0.0343285!10633-108I3;0.0148682!10818-111B8;0.0222255!10819-111B9;0.262074!10820-111C1;0.247641!10484-107A7;0.227465!10808-111A7;0.000895989!10169-103B7;0.0353378!10153-102I9;0.403999!13425-144D5;0.665297!13433-144E4;0.000819141!13437-144E8;0.00139026!11904-125F5;0.00162053!11905-125F6;0.22721!10039-101F3;0.0626579!10791-110H8;0.443078!10017-101C8;0.134015!10045-101F9;0.0623188!10509-107D5;0.0713688!10839-111E2;0.0705565!10692-109F8;0.0491882!10079-102A7;0.0301771!10078-102A6;0.00292215!10721-110A1;0.0187885!10569-108B2;0.0166378!10570-108B3;0.000244858!10571-108B4;0.000888433!10647-109A8;0.00135446!10752-110D5;0.00786978!10782-110G8;0.0243702!10726-110A6;0.747921!10018-101C9;0.0911888!10086-102B5;0.00186313!10182-103D2;0.000973299!10165-103B3;0.502886!10499-107C4;0.819466!10408-106B3;0.0252729!10019-101D1;0.90578!10068-101I5;0.00507523!10075-102A3;0.0399597!10077-102A5;0.0109488!10727-110A7;0.00695674!10775-110G1;0.0132019!10412-106B7;0.00535921!12231-129F8;0.253521!12232-129F9;0.987588!12233-129G1;0.525514!12234-129G2;0.489582!10414-106B9;0.737295!10170-103B8;0.00859445!10183-103D3;0.283012!10150-102I6;0.334048!10174-103C3;0.540595!10155-103A2;0.550708!10038-101F2;0.686616!10838-111E1;0.492116!10759-110E3;0.00503539!10514-107E1;0.00505159!10465-106H6;0.0090552!10691-109F7;0.00356694!10843-111E6;0.738034!10844-111E7;0.00610955!11747-123G1;0.0195269!11748-123G2;0.0129548!11749-123G3;0.0216476!11750-123G4;0.00435322!11751-123G5;0.0056001!11840-124H4;0.0136657!11752-123G6;0.00754268!11753-123G7;0.003112!11754-123G8;0.000260559!11755-123G9;0.00168102!11756-123H1;0.0111009!11833-124G6;0.0127052!11760-123H5;0.0289083!11836-124G9;0.026888!11758-123H3;0.00510662!11835-124G8;0.00321292!11762-123H7;0.00835307!11838-124H2;0.000993063!11757-123H2;0.00273153!11759-123H4;0.00102535!11761-123H6;0.0145076!11842-124H6;0.0365938!11837-124H1;0.00353842!10568-108B1;0.00897393!13230-141I8;0.721048!13231-141I9;0.00446055!10696-109G3;0.00373671!10493-107B7;0.847959!10494-107B8;0.0299072!10850-111F4;0.313534!10851-111F5;0.210379!10852-111F6;0.823555!10853-111F7;0.687301!10854-111F8;0.0709865!10855-111F9;0.106194!10856-111G1;0.608492!10847-111F1;0.942886!10846-111E9;0.26574!10848-111F2;0.387841!10845-111E8;0.382511!10857-111G2;0.00683308!10858-111G3;0.116745!10156-103A3;0.0616725!11901-125F2;0.50144!11902-125F3;0.276713!11903-125F4;0.0874005!10689-109F5;0.316808!10648-109A9;0.0418639!10784-110H1;0.171086!10744-110C6;0.237082!10772-110F7;0.00515795!10474-106I6;0.0187815!10600-108E6;0.0831911!10684-109E9;0.093663!12226-129F3;0.515513!12227-129F4;0.889219!10508-107D4;0.0777654!10539-107G8;0.00059373!10607-108F4;0.00509894!10555-107I6;0.00128383!10774-110F9;0.00118841!10637-108I7;0.0129652!10663-109C6;0.00605134!10728-110A8;0.000212274!10729-110A9;0.0141513!10430-106D7;0.0224543!10730-110B1;0.00127949!10813-111B3;0.0214615!10812-111B2;0.020098!10037-101F1;0.213634!10172-103C1;0.539374!10163-103B1;0.235327!10076-102A4;0.553293!10073-102A1;0.299285!10036-101E9;0.0222682!10195-103E6;0.488164!10277-104E7;0.566033!10434-106E2;0.482039!10550-107I1;0.03797!10545-107H5;0.0111333!10544-107H4;0.327317!10704-109H2;0.158259!10510-107D6;0.0086883!10558-107I9;0.00344564!10020-101D2;0.108257!10732-110B3;0.00740539!10049-101G4;0.726774!10698-109G5;0.54052!10437-106E5;0.0301209!10417-106C3;0.0091859!10035-101E8;0.13399!10171-103B9;0.387438!10157-103A4;0.256765!10034-101E7;0.542216!10072-101I9;0.436522!10199-103F1;0.0278904!10200-103F2;0.0172889!10697-109G4;0.00173496!10723-110A3;0.00623196!10179-103C8;0.307602!10160-103A7;0.673247!10180-103C9;0.842487!10162-103A9;0.929241!10021-101D3;0.676119!10840-111E3;0.00189211!10706-109H4;0.00792!10033-101E6;0.847347!10032-101E5;0.682952!10490-107B4;0.482708!10439-106E7;0.0103392!10022-101D4;0.049756!10176-103C5;0.0084491!10469-106I1;0.400363!10067-101I4;0.00217532!10411-106B6;0.0836214!10471-106I3;0.560447!10030-101E3;0.0942639!10475-106I7;0.0581896!10787-110H4;0.00620891!10477-106I9;0.00389471!10695-109G2;0.0357475!11771-123I7;0.32006!11772-123I8;0.336808!11773-123I9;0.292014!10093-102C3;0.336247!10442-106F1;0.0302418!10442-106F1;0.489396!10201-103F3;0.449114!10639-108I9;0.0558475!11843-124H7;0.00775303!11841-124H5;0.0658037!10693-109F9;0.056722!10436-106E4;0.0379932!10483-107A6;0.159282!10282-104F3;0.725998!10023-101D5;0.0285153!10066-101I3;0.00420175!10065-101I2;0.00120371!10800-110I8;0.00281142!10610-108F7;0.00144322!10841-111E4;0.00022952!10541-107H1;0.000784884!10842-111E5;0.000572141!10562-108A4;0.00235789!10024-101D6;0.0108032!10064-101I1;0.00279107!10609-108F6;0.00291357!10048-101G3;0.0545269!10781-110G7;0.0533002!10181-103D1;0.0423088!10159-103A6;0.752186!10056-101H2;0.876762!10737-110B8;0.296196!10025-101D7;0.0344171!10044-101F8;0.0349186!10424-106D1;0.00910976!10463-106H4;0.0126932!10616-108G4;0.0800718!10486-107A9;0.620045!10062-101H8;0.0933462!10202-103F4;0.0196701!10158-103A5;0.00642192!10441-106E9;0.805432!10031-101E4;0.00296525!10063-101H9;0.631117!10063-101H9;0.0455302!11763-123H8;0.0168911!11765-123I1;0.00190588!11768-123I4;0.0028951!10807-111A6;0.00318222!10790-110H7;0.0254176!10798-110I6;0.00575843!10786-110H3;0.0672822!10591-108D6;0.0231062!10593-108D8;0.0263203!10590-108D5;0.0395197!10026-101D8;0.00767908!10096-102C6;0.0291268!10168-103B6;0.12977!10154-103A1;0.806691!10209-103G2;0.822517!10061-101H7;0.00130511!10027-101D9;0.00439858!10043-101F7;0.821534!10783-110G9;0.0836775!10028-101E1;0.0242933!10060-101H6;0.0238918!10203-103F5;0.0370641!10059-101H5;0.00109221!10047-101G2;0.00118762!10029-101E2;0.000439911!10058-101H4;0.000789364!10418-106C4;0.00304586!10492-107B6;0.00975056!10694-109G1;0.0542011!10797-110I5;0.909709!10057-101H3;0.00975328!10100-102D1;0.00148284!10055-101H1;0.0144995!10204-103F6;0.0311643!10191-103E2;0.010932!10563-108A5;0.00030238
|name=CNhs11725_bl_f1
|name=CNhs11725_bl_f1
|tomtom_result=YJL103C#MA0427.1;1;0.00092156;0.438663;0.526828;9;CTCCTGAGC;TCTCCGGAGCT;-!REI1#MA0364.1;0;0.00183966;0.875681;0.583787;7;CTCCTGAGC;CCCCTGA;+!USV1#MA0413.1;6;0.0121976;5.80606;1;9;CTCCTGAGC;AAATTCCCCCTGAATTTGTG;+!SIP4#MA0380.1;-1;0.013648;6.49646;1;7;CTCCTGAGC;TCCGGAG;-!GSM1#MA0308.1;4;0.014037;6.68163;1;9;CTCCTGAGC;TATACTCCGGAGTTTTTTAAT;-!ESR1#MA0112.2;10;0.0150713;7.17393;1;9;CTCCTGAGC;AGGTCAGGGTGACCTGGGCC;-!sna#MA0086.1;0;0.0179263;8.5329;1;6;CTCCTGAGC;CACCTG;-
}}
}}

Latest revision as of 12:13, 7 September 2012

Full Name: CNhs11725_bl_f1

Motif matrix
POACGT
1516.18281028133291313.30369289302575.4071827826203486.6543861523911
2500.97746792735825935.38479481132226.6216589519033121448.5641504187788
30.9932520723359471491.79084262791234.5329287508613251394.2310486582544
40.139849294860907722891.1285242247890.139849294860907720.13984929486090772
50.00.00.02891.548072109372
610.58415172608748410.5841517260874842859.795616931109610.584151726087484
71256.485539333046316.947157074251041045.5838974588698572.5314782431942
8768.8296408608275542.49859904951861235.2667808373144344.9530513617036
9699.6408608262119986.2008981095436231.51708182338197974.1892313502236

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YJL103C#MA0427.110.000921560.4386630.5268289CTCCTGAGCTCTCCGGAGCT-
REI1#MA0364.100.001839660.8756810.5837877CTCCTGAGCCCCCTGA+
USV1#MA0413.160.01219765.8060619CTCCTGAGCAAATTCCCCCTGAATTTGTG+
SIP4#MA0380.1-10.0136486.4964617CTCCTGAGCTCCGGAG-
GSM1#MA0308.140.0140376.6816319CTCCTGAGCTATACTCCGGAGTTTTTTAAT-
ESR1#MA0112.2100.01507137.1739319CTCCTGAGCAGGTCAGGGTGACCTGGGCC-
sna#MA0086.100.01792638.532916CTCCTGAGCCACCTG-
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