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MacroAPE 1083:Motif CNGCAG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;52;0;0!02;0;0;0;52!03;0;0;52;0!04;0;52;0;0!05;52;0;0;0!06;0;0;52;0 |macroape_1083_sample_pvalues=11376-118A8;0.0325753!11327-117E4;0.363...")
 
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107!10429-106D6;0.364949!10464-106H5;0.561249!10827-111C8;0.81637!10789-110H6;0.329296!10828-111C9;0.135416!10788-110H5;0.336669!10792-110H9;0.223972!10765-110E9;0.326354!10829-111D1;0.274784!10830-111D2;0.397316!10831-111D3;0.195868!10832-111D4;0.478762!10833-111D5;0.264417!10764-110E8;0.313856!10770-110F5;0.213711!10399-106A3;0.443449!10400-106A4;0.154812!10405-106A9;0.146769!10834-111D6;0.136258!10835-111D7;0.363229!10836-111D8;0.37626!10837-111D9;0.518204!10699-109G6;0.45664!10802-111A1;0.241481!10796-110I4;0.631975!10010-101C1;0.0281325!10810-111A9;0.573159!10421-106C7;0.518519!10708-109H6;0.251311!12235-129G3;0.0324342!12236-129G4;0.00384624!12237-129G5;0.144338!10167-103B5;0.00657853!10151-102I7;3.89221e-06!10428-106D5;2.25772e-05!10795-110I3;0.482518!10805-111A4;0.146365!10052-101G7;0.457933!10189-103D9;0.429782!10589-108D4;0.348276!10425-106D2;0.620106!10427-106D4;0.949707!10702-109G9;0.388693!10432-106D9;0.587763!10496-107C1;0.0082069!10718-109I7;0.00742537!10011-101C2;0.456877!10053-101G8;0.492839!10686-109F2;0.23222!10084-102B3;0.16128!10012-101C3;1.8948e-06!10085-102B4;1.80303e-06!10482-107A5;0.000599985!10419-106C5;0.0692128!10080-102A8;0.0278189!10760-110E4;0.715969!10709-109H7;0.149237!10710-109H8;0.0294808!10703-109H1;0.0343461!10719-109I8;0.248448!10642-109A3;0.74774!10177-103C6;0.125084!10164-103B2;1.24739e-05!10173-103C2;2.5294e-06!10166-103B4;1.81416e-07!10083-102B2;2.00306e-05!10188-103D8;4.49285e-07!10552-107I3;3.60226e-05!10553-107I4;0.252308!10013-101C4;0.00165397!10536-107G5;0.449372!10618-108G6;0.284595!10423-106C9;0.081714!10785-110H2;0.0432079!12238-129G6;0.00878596!12239-129G7;0.124961!12240-129G8;0.94366!10416-106C2;0.202648!10801-110I9;0.822851!10766-110F1;0.271143!10824-111C5;0.268586!10825-111C6;0.3107!10826-111C7;0.29656!10454-106G4;0.267715!10409-106B4;0.35045!10638-108I8;0.132405!10636-108I6;0.00778486!10513-107D9;0.000594849!10420-106C6;0.117532!10082-102B1;0.669543!10014-101C5;0.219252!10070-101I7;0.497927!10452-106G2;0.314089!10453-106G3;0.668436!10449-106F8;0.913065!10042-101F6;0.770954!10069-101I6;0.000987554!10193-103E4;0.254131!10631-108I1;1.31477e-06!10438-106E6;0.509394!10488-107B2;0.0183126!10196-103E7;0.0579016!10071-101I8;0.305511!10071-101I8;0.227315!10041-101F5;0.00169741!10451-106G1;0.243632!10450-106F9;0.100957!10604-108F1;0.256072!10605-108F2;0.290658!10606-108F3;0.108907!10603-108E9;0.182271!10497-107C2;0.30974!10448-106F7;0.00199063!10643-109A4;0.205621!10426-106D3;0.00578232!10431-106D8;4.91128e-05!10197-103E8;0.00201669!10443-106F2;0.315552!10815-111B5;0.111994!10816-111B6;0.0826387!10817-111B7;0.0531226!10015-101C6;0.0864217!10410-106B5;0.646054!10054-101G9;0.376929!10758-110E2;0.0534404!10711-109H9;0.372719!10040-101F4;0.177501!10470-106I2;1.61945e-06!10415-106C1;0.00503963!10198-103E9;0.0325607!10614-108G2;0.299008!10612-108F9;0.311625!10549-107H9;0.0442797!10615-108G3;0.28233!10487-107B1;0.829908!10433-106E1;0.0343988!10688-109F4;0.0933783!10444-106F3;0.00358956!10444-106F3;0.965264!10485-107A8;0.932795!10413-106B8;0.32945!10175-103C4;0.692511!10161-103A8;8.32688e-06!12131-128D7;0.00014824!10624-108H3;0.256095!10712-109I1;0.215435!10205-103F7;0.639907!10206-103F8;0.18263!10207-103F9;0.116658!10050-101G5;0.734216!10051-101G6;0.525464!10016-101C7;0.112175!10046-101G1;0.129793!10778-110G4;0.148025!10633-108I3;0.381071!10818-111B8;0.279601!10819-111B9;0.220956!10820-111C1;0.218334!10484-107A7;0.212195!10808-111A7;0.031457!10169-103B7;0.448482!10153-102I9;7.98118e-06!13425-144D5;9.37929e-05!13433-144E4;0.547488!13437-144E8;0.44322!11904-125F5;0.40972!11905-125F6;0.0692106!10039-101F3;0.0392289!10791-110H8;4.58966e-06!10017-101C8;0.0157826!10045-101F9;0.774918!10509-107D5;0.539094!10839-111E2;0.0137537!10692-109F8;0.568773!10079-102A7;0.00493165!10078-102A6;0.0969468!10721-110A1;0.0906876!10569-108B2;0.310703!10570-108B3;0.300703!10571-108B4;0.370807!10647-109A8;0.25656!10752-110D5;0.116913!10782-110G8;0.0839781!10726-110A6;0.602268!10018-101C9;0.278961!10086-102B5;0.172168!10182-103D2;0.493575!10165-103B3;2.14807e-05!10499-107C4;2.48568e-05!10408-106B3;0.30945!10019-101D1;0.105952!10068-101I5;0.845809!10075-102A3;0.829245!10077-102A5;0.907306!10727-110A7;0.443952!10775-110G1;0.168169!10412-106B7;0.210917!12231-129F8;0.000124992!12232-129F9;0.490783!12233-129G1;0.506005!12234-129G2;0.674491!10414-106B9;0.179619!10170-103B8;0.145903!10183-103D3;2.23347e-07!10150-102I6;6.90577e-07!10174-103C3;3.17768e-06!10155-103A2;0.00233287!10038-101F2;0.000904815!10838-111E1;0.000317916!10759-110E3;0.786705!10514-107E1;0.246351!10465-106H6;0.0622327!10691-109F7;0.115422!10843-111E6;0.0270407!10844-111E7;0.861232!11747-123G1;0.452748!11748-123G2;0.855111!11749-123G3;0.905077!11750-123G4;0.68822!11751-123G5;0.723351!11840-124H4;0.680415!11752-123G6;0.89177!11753-123G7;0.838531!11754-123G8;0.817673!11755-123G9;0.582626!11756-123H1;0.721637!11833-124G6;0.721317!11760-123H5;0.631998!11836-124G9;0.291692!11758-123H3;0.419879!11835-124G8;0.433102!11762-123H7;0.335942!11838-124H2;0.352452!11757-123H2;0.244511!11759-123H4;0.638926!11761-123H6;0.899466!11842-124H6;0.214314!11837-124H1;0.37236!10568-108B1;0.513308!13230-141I8;0.359135!13231-141I9;0.370953!10696-109G3;0.441628!10493-107B7;0.389673!10494-107B8;0.133993!10850-111F4;0.00168742!10851-111F5;4.94807e-05!10852-111F6;0.0906894!10853-111F7;0.121503!10854-111F8;0.0343684!10855-111F9;0.130492!10856-111G1;0.459563!10847-111F1;0.330547!10846-111E9;0.885512!10848-111F2;0.0568593!10845-111E8;0.08856!10857-111G2;0.139429!10858-111G3;0.137039!10156-103A3;0.0562982!11901-125F2;3.3021e-06!11902-125F3;0.0373321!11903-125F4;0.135045!10689-109F5;0.163005!10648-109A9;0.0205625!10784-110H1;0.0797639!10744-110C6;7.81278e-05!10772-110F7;0.873342!10474-106I6;0.277558!10600-108E6;0.916393!10684-109E9;0.532289!12226-129F3;0.10781!12227-129F4;0.00223862!10508-107D4;0.488161!10539-107G8;0.0101243!10607-108F4;0.00215193!10555-107I6;0.503423!10774-110F9;0.0175638!10637-108I7;0.280332!10663-109C6;0.784942!10728-110A8;0.566798!10729-110A9;0.3829!10430-106D7;0.892793!10730-110B1;0.389702!10813-111B3;0.0365608!10812-111B2;0.649652!10037-101F1;0.255091!10172-103C1;6.96393e-06!10163-103B1;3.69103e-07!10076-102A4;9.97407e-06!10073-102A1;2.89462e-07!10036-101E9;0.000431821!10195-103E6;5.65138e-07!10277-104E7;6.64611e-06!10434-106E2;0.000130474!10550-107I1;0.00137782!10545-107H5;0.0467766!10544-107H4;0.000557538!10704-109H2;0.000194811!10510-107D6;0.760674!10558-107I9;0.25643!10020-101D2;0.075748!10732-110B3;0.295146!10049-101G4;0.411517!10698-109G5;0.495027!10437-106E5;0.0142106!10417-106C3;0.0172841!10035-101E8;1.43708e-05!10171-103B9;5.86194e-07!10157-103A4;7.06694e-08!10034-101E7;2.98985e-06!10072-101I9;6.06071e-07!10199-103F1;0.000969487!10200-103F2;0.199719!10697-109G4;0.292738!10723-110A3;0.325599!10179-103C8;0.119263!10160-103A7;5.62763e-05!10180-103C9;7.44296e-05!10162-103A9;0.000260095!10021-101D3;0.000226302!10840-111E3;0.958418!10706-109H4;0.535133!10033-101E6;0.00633703!10032-101E5;6.54327e-07!10490-107B4;7.55433e-07!10439-106E7;0.0350944!10022-101D4;0.0216594!10176-103C5;0.309878!10469-106I1;1.07841e-06!10067-101I4;0.00592725!10411-106B6;0.056966!10471-106I3;0.0792864!10030-101E3;0.154269!10475-106I7;0.0199575!10787-110H4;0.858187!10477-106I9;0.316437!10695-109G2;0.262971!11771-123I7;0.175218!11772-123I8;0.108154!11773-123I9;0.328877!10093-102C3;0.0746104!10442-106F1;0.246514!10442-106F1;0.0348703!10201-103F3;0.0528145!10639-108I9;0.329657!11843-124H7;0.000177593!11841-124H5;0.00814217!10693-109F9;0.0734807!10436-106E4;0.0248428!10483-107A6;0.00573165!10282-104F3;0.0044126!10023-101D5;0.361436!10066-101I3;0.366706!10065-101I2;0.164485!10800-110I8;0.300365!10610-108F7;0.763615!10841-111E4;0.868556!10541-107H1;0.856838!10842-111E5;0.281709!10562-108A4;0.361488!10024-101D6;0.784163!10064-101I1;0.571206!10609-108F6;0.175503!10048-101G3;0.644302!10781-110G7;0.325359!10181-103D1;0.716707!10159-103A6;0.000507342!10056-101H2;0.00144394!10737-110B8;0.00239168!10025-101D7;0.718104!10044-101F8;0.438024!10424-106D1;0.626523!10463-106H4;0.482005!10616-108G4;0.0158973!10486-107A9;0.00212174!10062-101H8;0.0229328!10202-103F4;0.561286!10158-103A5;0.157007!10441-106E9;0.000898494!10031-101E4;0.650692!10063-101H9;4.91884e-06!10063-101H9;0.00100737!11763-123H8;0.181397!11765-123I1;0.688162!11768-123I4;0.84766!10807-111A6;0.929423!10790-110H7;0.797944!10798-110I6;0.617327!10786-110H3;0.892569!10591-108D6;0.85946!10593-108D8;0.962096!10590-108D5;0.831743!10026-101D8;0.381155!10096-102C6;0.343007!10168-103B6;0.113428!10154-103A1;6.51958e-06!10209-103G2;0.000103261!10061-101H7;0.462573!10027-101D9;0.287113!10043-101F7;0.520734!10783-110G9;0.96947!10028-101E1;0.0970916!10060-101H6;0.947851!10203-103F5;0.493294!10059-101H5;0.388822!10047-101G2;0.37729!10029-101E2;0.719315!10058-101H4;0.863736!10418-106C4;0.306228!10492-107B6;0.0428997!10694-109G1;0.0201516!10797-110I5;0.648391!10057-101H3;0.049585!10100-102D1;0.343625!10055-101H1;0.302166!10204-103F6;0.24248!10191-103E2;0.499768!10563-108A5;0.215181
|name=motif_CNGCAG
|name=motif_CNGCAG
|tomtom_result=SOK2#MA0385.1;2;0.00126743;0.603298;0.428248;6;CTGCAG;ACCTGCAGGCA;+!PHD1#MA0355.1;2;0.00180172;0.857618;0.428248;6;CTGCAG;ACCTGCAGCA;+!Myf#MA0055.1;6;0.00446684;2.12622;0.707811;6;CTGCAG;CAGCAGCTGCTG;+
}}
}}

Latest revision as of 12:42, 7 September 2012

Full Name: motif_CNGCAG

Motif matrix
POACGT
0105200
0200052
0300520
0405200
0552000
0600520

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.120.001267430.6032980.4282486CTGCAGACCTGCAGGCA+
PHD1#MA0355.120.001801720.8576180.4282486CTGCAGACCTGCAGCA+
Myf#MA0055.160.004466842.126220.7078116CTGCAGCAGCAGCTGCTG+
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