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MacroAPE 1083:Motif260: Difference between revisions

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10H6;0.386858!10828-111C9;0.363718!10788-110H5;0.38788!10792-110H9;0.460034!10765-110E9;0.455885!10829-111D1;0.50665!10830-111D2;0.392037!10831-111D3;0.805141!10832-111D4;0.202189!10833-111D5;0.31916!10764-110E8;0.278973!10770-110F5;0.800892!10399-106A3;0.468941!10400-106A4;0.513286!10405-106A9;0.608818!10834-111D6;0.650872!10835-111D7;0.499259!10836-111D8;0.482656!10837-111D9;0.460136!10699-109G6;0.382971!10802-111A1;0.566588!10796-110I4;0.649537!10010-101C1;0.65963!10810-111A9;0.553465!10421-106C7;0.390653!10708-109H6;0.761902!12235-129G3;0.12988!12236-129G4;0.156481!12237-129G5;0.642224!10167-103B5;0.222677!10151-102I7;0.433652!10428-106D5;0.382123!10795-110I3;0.443652!10805-111A4;0.802584!10052-101G7;0.532292!10189-103D9;0.337064!10589-108D4;0.634079!10425-106D2;0.458432!10427-106D4;0.484115!10702-109G9;0.958413!10432-106D9;0.999681!10496-107C1;0.71156!10718-109I7;0.911726!10011-101C2;0.42725!10053-101G8;0.364802!10686-109F2;0.816821!10084-102B3;0.467732!10012-101C3;0.498116!10085-102B4;0.436303!10482-107A5;0.552248!10419-106C5;0.672266!10080-102A8;0.883476!10760-110E4;0.545928!10709-109H7;0.155356!10710-109H8;0.483754!10703-109H1;0.828511!10719-109I8;0.657232!10642-109A3;0.635006!10177-103C6;0.726606!10164-103B2;0.438598!10173-103C2;0.403603!10166-103B4;0.622376!10083-102B2;0.450917!10188-103D8;0.610031!10552-107I3;0.444099!10553-107I4;0.0132004!10013-101C4;0.296446!10536-107G5;0.5783!10618-108G6;0.96726!10423-106C9;0.890044!10785-110H2;0.368522!12238-129G6;0.447555!12239-129G7;0.235233!12240-129G8;0.484103!10416-106C2;0.439458!10801-110I9;0.711336!10766-110F1;0.597487!10824-111C5;0.487147!10825-111C6;0.0686444!10826-111C7;0.0953044!10454-106G4;0.109387!10409-106B4;0.174639!10638-108I8;0.512371!10636-108I6;0.0707194!10513-107D9;0.57443!10420-106C6;0.241583!10082-102B1;0.632614!10014-101C5;0.926885!10070-101I7;0.462339!10452-106G2;0.400021!10453-106G3;0.873722!10449-106F8;0.948651!10042-101F6;0.997673!10069-101I6;0.456998!10193-103E4;0.83271!10631-108I1;0.526935!10438-106E6;0.335759!10488-107B2;0.236488!10196-103E7;0.283629!10071-101I8;0.218284!10071-101I8;0.571002!10041-101F5;0.572394!10451-106G1;0.359114!10450-106F9;0.384361!10604-108F1;0.564152!10605-108F2;0.884771!10606-108F3;0.537088!10603-108E9;0.626051!10497-107C2;0.837948!10448-106F7;0.995602!10643-109A4;0.344329!10426-106D3;0.90824!10431-106D8;0.776776!10197-103E8;0.796251!10443-106F2;0.589177!10815-111B5;0.337457!10816-111B6;0.0562464!10817-111B7;0.0632869!10015-101C6;0.0538277!10410-106B5;0.617731!10054-101G9;0.89305!10758-110E2;0.571649!10711-109H9;0.911798!10040-101F4;0.953013!10470-106I2;0.398852!10415-106C1;0.799944!10198-103E9;0.840539!10614-108G2;0.481461!10612-108F9;0.46362!10549-107H9;0.352926!10615-108G3;0.0722966!10487-107B1;0.838827!10433-106E1;0.178042!10688-109F4;0.643215!10444-106F3;0.694739!10444-106F3;0.355719!10485-107A8;0.29657!10413-106B8;0.837154!10175-103C4;0.685229!10161-103A8;0.527203!12131-128D7;0.476266!10624-108H3;0.506019!10712-109I1;0.133831!10205-103F7;0.979705!10206-103F8;0.785374!10207-103F9;0.754384!10050-101G5;0.753156!10051-101G6;0.611933!10016-101C7;0.680302!10046-101G1;0.872299!10778-110G4;0.841815!10633-108I3;0.563801!10818-111B8;0.901657!10819-111B9;0.339369!10820-111C1;0.326884!10484-107A7;0.327506!10808-111A7;0.903646!10169-103B7;0.419915!10153-102I9;0.477367!13425-144D5;0.383098!13433-144E4;0.658798!13437-144E8;0.670636!11904-125F5;0.349115!11905-125F6;0.458227!10039-101F3;0.246106!10791-110H8;0.394388!10017-101C8;0.507706!10045-101F9;0.142467!10509-107D5;0.5651!10839-111E2;0.326677!10692-109F8;0.0551092!10079-102A7;0.44877!10078-102A6;0.957936!10721-110A1;0.549144!10569-108B2;0.746799!10570-108B3;0.462643!10571-108B4;0.71917!10647-109A8;0.411242!10752-110D5;0.818846!10782-110G8;0.377326!10726-110A6;0.852235!10018-101C9;0.93511!10086-102B5;0.838256!10182-103D2;0.667654!10165-103B3;0.450633!10499-107C4;0.455658!10408-106B3;0.745034!10019-101D1;0.461273!10068-101I5;0.44375!10075-102A3;0.609947!10077-102A5;0.722661!10727-110A7;0.78963!10775-110G1;0.954191!10412-106B7;0.668736!12231-129F8;0.223097!12232-129F9;0.354728!12233-129G1;0.49497!12234-129G2;0.474041!10414-106B9;0.597125!10170-103B8;0.446219!10183-103D3;0.478671!10150-102I6;0.466319!10174-103C3;0.390519!10155-103A2;0.444192!10038-101F2;0.396378!10838-111E1;0.50024!10759-110E3;0.481003!10514-107E1;0.600586!10465-106H6;0.49997!10691-109F7;0.563468!10843-111E6;0.0438351!10844-111E7;0.511918!11747-123G1;0.96875!11748-123G2;0.177435!11749-123G3;0.293489!11750-123G4;0.500115!11751-123G5;0.932717!11840-124H4;0.85299!11752-123G6;0.836005!11753-123G7;0.993276!11754-123G8;0.959871!11755-123G9;0.335402!11756-123H1;0.662469!11833-124G6;0.621125!11760-123H5;0.845549!11836-124G9;0.778776!11758-123H3;0.865081!11835-124G8;0.936831!11762-123H7;0.857646!11838-124H2;0.719536!11757-123H2;0.578677!11759-123H4;0.98062!11761-123H6;0.606647!11842-124H6;0.681596!11837-124H1;0.551261!10568-108B1;0.508462!13230-141I8;0.0719366!13231-141I9;0.521249!10696-109G3;0.725762!10493-107B7;0.422536!10494-107B8;0.432575!10850-111F4;0.769061!10851-111F5;0.00959968!10852-111F6;0.189984!10853-111F7;0.908774!10854-111F8;0.0352646!10855-111F9;0.487472!10856-111G1;0.333555!10847-111F1;0.288618!10846-111E9;0.704261!10848-111F2;0.125785!10845-111E8;0.00929419!10857-111G2;0.41097!10858-111G3;0.000269214!10156-103A3;0.170427!11901-125F2;0.410936!11902-125F3;0.62398!11903-125F4;0.831064!10689-109F5;0.955976!10648-109A9;0.0353158!10784-110H1;0.404751!10744-110C6;0.67778!10772-110F7;0.908408!10474-106I6;0.64862!10600-108E6;0.816044!10684-109E9;0.1387!12226-129F3;0.872526!12227-129F4;0.856918!10508-107D4;0.104607!10539-107G8;0.911819!10607-108F4;0.76223!10555-107I6;0.348738!10774-110F9;0.75345!10637-108I7;0.188755!10663-109C6;0.620914!10728-110A8;0.9338!10729-110A9;0.667828!10430-106D7;0.909498!10730-110B1;0.531823!10813-111B3;0.431499!10812-111B2;0.763755!10037-101F1;0.428019!10172-103C1;0.35973!10163-103B1;0.486331!10076-102A4;0.398612!10073-102A1;0.449122!10036-101E9;0.559725!10195-103E6;0.4408!10277-104E7;0.408035!10434-106E2;0.761514!10550-107I1;0.144625!10545-107H5;0.609994!10544-107H4;0.659016!10704-109H2;0.661812!10510-107D6;0.605262!10558-107I9;0.232993!10020-101D2;0.368062!10732-110B3;0.682181!10049-101G4;0.481369!10698-109G5;0.329031!10437-106E5;0.794763!10417-106C3;0.0291163!10035-101E8;0.399293!10171-103B9;0.396826!10157-103A4;0.496173!10034-101E7;0.367017!10072-101I9;0.378529!10199-103F1;0.554651!10200-103F2;0.464306!10697-109G4;0.600496!10723-110A3;0.992934!10179-103C8;0.964085!10160-103A7;0.366952!10180-103C9;0.450328!10162-103A9;0.458098!10021-101D3;0.351068!10840-111E3;0.382717!10706-109H4;0.742106!10033-101E6;0.0778618!10032-101E5;0.431324!10490-107B4;0.462865!10439-106E7;0.115413!10022-101D4;0.282309!10176-103C5;0.406965!10469-106I1;0.421982!10067-101I4;0.31423!10411-106B6;0.685815!10471-106I3;0.552425!10030-101E3;0.131091!10475-106I7;0.447047!10787-110H4;0.39533!10477-106I9;0.147505!10695-109G2;0.484483!11771-123I7;0.660174!11772-123I8;0.240574!11773-123I9;0.461641!10093-102C3;0.111119!10442-106F1;0.186944!10442-106F1;0.181277!10201-103F3;0.279347!10639-108I9;0.225605!11843-124H7;0.19193!11841-124H5;0.680954!10693-109F9;0.358862!10436-106E4;0.614424!10483-107A6;0.502486!10282-104F3;0.864222!10023-101D5;0.647679!10066-101I3;0.964583!10065-101I2;0.387397!10800-110I8;0.705067!10610-108F7;0.246827!10841-111E4;0.763763!10541-107H1;0.200492!10842-111E5;0.726697!10562-108A4;0.396928!10024-101D6;0.490761!10064-101I1;0.226934!10609-108F6;0.973169!10048-101G3;0.437901!10781-110G7;0.557064!10181-103D1;0.966276!10159-103A6;0.497094!10056-101H2;0.43669!10737-110B8;0.93944!10025-101D7;0.956199!10044-101F8;0.917702!10424-106D1;0.9708!10463-106H4;0.931057!10616-108G4;0.446005!10486-107A9;0.216935!10062-101H8;0.164479!10202-103F4;0.599623!10158-103A5;0.436114!10441-106E9;0.56194!10031-101E4;0.91204!10063-101H9;0.449791!10063-101H9;0.579737!11763-123H8;0.61036!11765-123I1;0.351295!11768-123I4;0.606899!10807-111A6;0.263035!10790-110H7;0.970567!10798-110I6;0.781727!10786-110H3;0.103892!10591-108D6;0.726035!10593-108D8;0.651125!10590-108D5;0.66391!10026-101D8;0.276927!10096-102C6;0.57138!10168-103B6;0.347398!10154-103A1;0.453156!10209-103G2;0.432021!10061-101H7;0.772634!10027-101D9;0.986205!10043-101F7;0.196579!10783-110G9;0.00209067!10028-101E1;0.290466!10060-101H6;0.656198!10203-103F5;0.894828!10059-101H5;0.795975!10047-101G2;0.731655!10029-101E2;0.42257!10058-101H4;0.308052!10418-106C4;0.737903!10492-107B6;0.851978!10694-109G1;0.550223!10797-110I5;0.627104!10057-101H3;0.856738!10100-102D1;0.965984!10055-101H1;0.449423!10204-103F6;0.782004!10191-103E2;0.232307!10563-108A5;0.745509
|name=motif260
|name=motif260
|tomtom_result=RXR::RAR_DR5#MA0159.1;4;0.00470923;2.24159;1;8;CTCTGCCT;TGACCTCTCCGTGACCT;-!CHA4#MA0283.1;1;0.00514679;2.44987;1;7;CTCTGCCT;TCTCCGCC;-!GABPA#MA0062.1;0;0.0060863;2.89708;1;8;CTCTGCCT;CTCTTCCGGT;-!PPARG::RXRA#MA0065.2;4;0.0102748;4.8908;1;8;CTCTGCCT;TGACCTTTGCCCTAC;-!SPI1#MA0080.2;-1;0.0107707;5.12686;1;7;CTCTGCCT;ACTTCCT;-!BAS1#MA0278.1;9;0.0118058;5.61955;1;8;CTCTGCCT;TTGACTTGACTCTGGCTGTGC;-!SPI1#MA0080.2;-2;0.0146143;6.95639;1;6;CTCTGCCT;CTTCCG;-!Klf4#MA0039.1;0;0.018569;8.83886;1;8;CTCTGCCT;CCTTCCTTTA;-
}}
}}

Latest revision as of 12:45, 7 September 2012

Full Name: motif260

Motif matrix
POACGT
01250016164626150
02460702643159511
03132015549843815562
0416413323016879111168
0511298349556985450654
06319415209245636912
07270415789711605000
0810907205475344129963

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RXR::RAR_DR5#MA0159.140.004709232.2415918CTCTGCCTTGACCTCTCCGTGACCT-
CHA4#MA0283.110.005146792.4498717CTCTGCCTTCTCCGCC-
GABPA#MA0062.100.00608632.8970818CTCTGCCTCTCTTCCGGT-
PPARG::RXRA#MA0065.240.01027484.890818CTCTGCCTTGACCTTTGCCCTAC-
SPI1#MA0080.2-10.01077075.1268617CTCTGCCTACTTCCT-
BAS1#MA0278.190.01180585.6195518CTCTGCCTTTGACTTGACTCTGGCTGTGC-
SPI1#MA0080.2-20.01461436.9563916CTCTGCCTCTTCCG-
Klf4#MA0039.100.0185698.8388618CTCTGCCTCCTTCCTTTA-
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