MacroAPE 1083:CNhs12093 bu f2: Difference between revisions
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(Created page with "{{Macroape_1083
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2!10534-107G3;0.0510401!10429-106D6;0.0506894!10464-106H5;0.183882!10827-111C8;0.0971682!10789-110H6;0.472491!10828-111C9;0.231496!10788-110H5;0.77448!10792-110H9;0.108031!10765-110E9;0.613986!10829-111D1;0.147905!10830-111D2;0.133371!10831-111D3;0.617171!10832-111D4;0.161628!10833-111D5;0.0755648!10764-110E8;0.0601197!10770-110F5;0.0242907!10399-106A3;0.120754!10400-106A4;0.0384006!10405-106A9;0.0451548!10834-111D6;0.0369068!10835-111D7;0.0552518!10836-111D8;0.147765!10837-111D9;0.143656!10699-109G6;0.284867!10802-111A1;0.467874!10796-110I4;0.0870451!10010-101C1;0.0941051!10810-111A9;0.0480291!10421-106C7;0.00426322!10708-109H6;0.0841895!12235-129G3;0.00490793!12236-129G4;0.303948!12237-129G5;0.130872!10167-103B5;0.550381!10151-102I7;0.181365!10428-106D5;0.203806!10795-110I3;0.190433!10805-111A4;0.0384543!10052-101G7;0.0184539!10189-103D9;0.0177291!10589-108D4;0.0324408!10425-106D2;0.113327!10427-106D4;0.524174!10702-109G9;0.0725733!10432-106D9;0.096386!10496-107C1;0.0796382!10718-109I7;0.44805!10011-101C2;0.149347!10053-101G8;0.0469137!10686-109F2;0.153569!10084-102B3;0.400059!10012-101C3;0.0866994!10085-102B4;0.0659503!10482-107A5;0.450059!10419-106C5;0.0319948!10080-102A8;0.123718!10760-110E4;0.183784!10709-109H7;0.0368505!10710-109H8;0.120005!10703-109H1;0.0294595!10719-109I8;0.108803!10642-109A3;0.14014!10177-103C6;0.15298!10164-103B2;0.170732!10173-103C2;0.246133!10166-103B4;0.570272!10083-102B2;0.320887!10188-103D8;0.198306!10552-107I3;0.0629537!10553-107I4;0.0917812!10013-101C4;0.41893!10536-107G5;0.0170598!10618-108G6;0.0655087!10423-106C9;0.132681!10785-110H2;0.364786!12238-129G6;0.235566!12239-129G7;0.09768!12240-129G8;0.00791598!10416-106C2;0.0919001!10801-110I9;0.211463!10766-110F1;0.247672!10824-111C5;0.166453!10825-111C6;0.0482803!10826-111C7;0.0535548!10454-106G4;0.0585057!10409-106B4;0.0941178!10638-108I8;0.105896!10636-108I6;0.0518447!10513-107D9;0.160542!10420-106C6;0.085439!10082-102B1;0.00965647!10014-101C5;0.104533!10070-101I7;0.0326136!10452-106G2;0.0461399!10453-106G3;0.0490375!10449-106F8;0.036886!10042-101F6;0.0401581!10069-101I6;0.051147!10193-103E4;0.00970359!10631-108I1;0.145364!10438-106E6;0.0236025!10488-107B2;0.0378893!10196-103E7;0.00898121!10071-101I8;0.0459694!10071-101I8;0.0097364!10041-101F5;0.462239!10451-106G1;0.0148313!10450-106F9;0.050457!10604-108F1;0.0105973!10605-108F2;0.00668143!10606-108F3;0.000528125!10603-108E9;0.0100526!10497-107C2;0.0335391!10448-106F7;0.447517!10643-109A4;0.075969!10426-106D3;0.102127!10431-106D8;0.0695377!10197-103E8;0.00453286!10443-106F2;0.0093787!10815-111B5;0.0961595!10816-111B6;0.0280854!10817-111B7;0.0265789!10015-101C6;0.0193521!10410-106B5;0.0195311!10054-101G9;0.122582!10758-110E2;0.0122734!10711-109H9;0.0050054!10040-101F4;0.0073893!10470-106I2;0.098377!10415-106C1;0.237658!10198-103E9;0.576189!10614-108G2;0.00550509!10612-108F9;0.891475!10549-107H9;0.244557!10615-108G3;0.0424142!10487-107B1;0.054373!10433-106E1;0.204072!10688-109F4;0.0342601!10444-106F3;0.295567!10444-106F3;0.585097!10485-107A8;0.519245!10413-106B8;0.0120302!10175-103C4;0.798278!10161-103A8;0.187555!12131-128D7;0.204308!10624-108H3;0.170739!10712-109I1;0.868176!10205-103F7;0.0229835!10206-103F8;0.00761785!10207-103F9;0.00997764!10050-101G5;0.125073!10051-101G6;0.012401!10016-101C7;0.0324591!10046-101G1;0.057531!10778-110G4;0.059427!10633-108I3;0.174084!10818-111B8;0.166913!10819-111B9;0.0627896!10820-111C1;0.0614248!10484-107A7;0.0593341!10808-111A7;0.104879!10169-103B7;0.0820077!10153-102I9;0.229594!13425-144D5;0.152071!13433-144E4;0.101961!13437-144E8;0.0745201!11904-125F5;0.110961!11905-125F6;0.126852!10039-101F3;0.0173955!10791-110H8;0.111625!10017-101C8;0.0938337!10045-101F9;0.0739158!10509-107D5;0.0527559!10839-111E2;0.236557!10692-109F8;0.0408419!10079-102A7;0.16757!10078-102A6;0.0179516!10721-110A1;0.100874!10569-108B2;0.0145645!10570-108B3;0.130785!10571-108B4;0.0658449!10647-109A8;0.0665928!10752-110D5;0.0374192!10782-110G8;0.0701516!10726-110A6;0.221416!10018-101C9;0.161185!10086-102B5;0.535538!10182-103D2;0.386214!10165-103B3;0.143157!10499-107C4;0.122464!10408-106B3;0.232932!10019-101D1;0.0852795!10068-101I5;0.0599511!10075-102A3;0.00446702!10077-102A5;0.0653712!10727-110A7;0.386212!10775-110G1;0.0300824!10412-106B7;0.05202!12231-129F8;0.702731!12232-129F9;0.739249!12233-129G1;0.724352!12234-129G2;0.732121!10414-106B9;0.52014!10170-103B8;0.0311649!10183-103D3;0.176893!10150-102I6;0.137585!10174-103C3;0.156989!10155-103A2;0.0731428!10038-101F2;0.0462144!10838-111E1;0.0303153!10759-110E3;0.00301715!10514-107E1;0.000555001!10465-106H6;0.0301739!10691-109F7;0.0288328!10843-111E6;0.829902!10844-111E7;0.142892!11747-123G1;0.208135!11748-123G2;0.21916!11749-123G3;0.143728!11750-123G4;0.219084!11751-123G5;0.107626!11840-124H4;0.00948148!11752-123G6;0.033073!11753-123G7;0.153452!11754-123G8;0.195724!11755-123G9;0.0958598!11756-123H1;0.552783!11833-124G6;0.283675!11760-123H5;0.0419351!11836-124G9;0.273263!11758-123H3;0.109926!11835-124G8;0.0794788!11762-123H7;0.0208435!11838-124H2;0.155116!11757-123H2;0.118461!11759-123H4;0.194408!11761-123H6;0.174075!11842-124H6;0.040414!11837-124H1;0.0996738!10568-108B1;0.0640953!13230-141I8;0.628023!13231-141I9;0.0285636!10696-109G3;0.0258762!10493-107B7;0.575893!10494-107B8;0.00950367!10850-111F4;0.736676!10851-111F5;0.116943!10852-111F6;0.0686127!10853-111F7;0.377284!10854-111F8;0.103996!10855-111F9;0.0256998!10856-111G1;0.136708!10847-111F1;0.889563!10846-111E9;0.0731537!10848-111F2;0.421848!10845-111E8;0.0280887!10857-111G2;0.00551688!10858-111G3;0.139406!10156-103A3;0.00516672!11901-125F2;0.157668!11902-125F3;0.0248239!11903-125F4;0.00563268!10689-109F5;0.0105104!10648-109A9;0.18562!10784-110H1;0.00279114!10744-110C6;0.149016!10772-110F7;0.0157671!10474-106I6;0.0505354!10600-108E6;0.199891!10684-109E9;0.181737!12226-129F3;0.230397!12227-129F4;0.481643!10508-107D4;0.00275957!10539-107G8;0.281751!10607-108F4;0.350504!10555-107I6;0.151075!10774-110F9;0.2718!10637-108I7;0.137485!10663-109C6;0.247884!10728-110A8;0.150527!10729-110A9;0.15356!10430-106D7;0.290746!10730-110B1;0.121262!10813-111B3;0.535152!10812-111B2;0.130911!10037-101F1;0.240004!10172-103C1;0.104098!10163-103B1;0.155291!10076-102A4;0.162171!10073-102A1;0.101114!10036-101E9;0.647158!10195-103E6;0.0901015!10277-104E7;0.0793474!10434-106E2;0.0994793!10550-107I1;0.032376!10545-107H5;0.00405962!10544-107H4;0.208056!10704-109H2;0.102632!10510-107D6;0.3366!10558-107I9;0.12051!10020-101D2;0.0494722!10732-110B3;0.0237008!10049-101G4;0.83182!10698-109G5;0.0743928!10437-106E5;0.21074!10417-106C3;0.0547423!10035-101E8;0.484356!10171-103B9;0.0987041!10157-103A4;0.141634!10034-101E7;0.143311!10072-101I9;0.0941834!10199-103F1;0.741262!10200-103F2;0.00174669!10697-109G4;0.00561774!10723-110A3;0.385949!10179-103C8;0.430845!10160-103A7;0.252028!10180-103C9;0.226363!10162-103A9;0.0554989!10021-101D3;0.149493!10840-111E3;0.00663987!10706-109H4;0.0286077!10033-101E6;0.333101!10032-101E5;0.0775452!10490-107B4;0.0773873!10439-106E7;0.0039313!10022-101D4;0.00474964!10176-103C5;0.0268225!10469-106I1;0.278834!10067-101I4;0.143546!10411-106B6;0.1248!10471-106I3;0.761247!10030-101E3;0.313401!10475-106I7;0.0620108!10787-110H4;0.0666168!10477-106I9;0.0704856!10695-109G2;0.215059!11771-123I7;0.418736!11772-123I8;0.148902!11773-123I9;0.214743!10093-102C3;0.559425!10442-106F1;0.00510081!10442-106F1;0.0452933!10201-103F3;0.0589212!10639-108I9;0.0206668!11843-124H7;0.204444!11841-124H5;0.0418235!10693-109F9;0.0298512!10436-106E4;0.144666!10483-107A6;0.477847!10282-104F3;0.0715365!10023-101D5;0.0319141!10066-101I3;0.0103023!10065-101I2;0.0283632!10800-110I8;0.00112901!10610-108F7;0.0810733!10841-111E4;0.914278!10541-107H1;0.00984465!10842-111E5;0.0128453!10562-108A4;0.0409215!10024-101D6;0.520348!10064-101I1;0.0127364!10609-108F6;0.00958849!10048-101G3;0.1819!10781-110G7;0.083613!10181-103D1;0.28815!10159-103A6;0.0592015!10056-101H2;0.0714046!10737-110B8;0.0432119!10025-101D7;0.4345!10044-101F8;0.632061!10424-106D1;0.191622!10463-106H4;0.0457772!10616-108G4;0.0947823!10486-107A9;0.257061!10062-101H8;0.23991!10202-103F4;0.0561096!10158-103A5;0.00890974!10441-106E9;0.123522!10031-101E4;0.0296011!10063-101H9;0.0796665!10063-101H9;0.506313!11763-123H8;0.00629453!11765-123I1;0.0493947!11768-123I4;0.0735419!10807-111A6;0.0935892!10790-110H7;0.0980025!10798-110I6;0.027737!10786-110H3;0.115394!10591-108D6;0.0852116!10593-108D8;0.102746!10590-108D5;0.311351!10026-101D8;0.0543992!10096-102C6;0.912655!10168-103B6;0.0690926!10154-103A1;0.156822!10209-103G2;0.154963!10061-101H7;0.00346442!10027-101D9;0.00424717!10043-101F7;0.336361!10783-110G9;0.577299!10028-101E1;0.525357!10060-101H6;0.0276712!10203-103F5;0.0062728!10059-101H5;0.00396222!10047-101G2;0.00203988!10029-101E2;0.0049343!10058-101H4;0.00554164!10418-106C4;0.00682712!10492-107B6;0.00489276!10694-109G1;0.00931291!10797-110I5;0.948019!10057-101H3;0.10312!10100-102D1;0.000793041!10055-101H1;0.0247453!10204-103F6;0.0338969!10191-103E2;0.248447!10563-108A5;0.0176675 | ||
|name=CNhs12093_bu_f2 | |name=CNhs12093_bu_f2 | ||
|tomtom_result=ACE2#MA0267.1;-2;0.000244704;0.116479;0.232592;7;GCGGCTGGCGGC;TGCTGGT;-!Myf#MA0055.1;2;0.00154428;0.735077;0.581982;10;GCGGCTGGCGGC;CAGCAGCTGCTG;-!Mafb#MA0117.1;-3;0.00268802;1.2795;0.581982;8;GCGGCTGGCGGC;GCTGACGG;+!brk#MA0213.1;-4;0.00306144;1.45724;0.581982;8;GCGGCTGGCGGC;CTGGCGCC;+!SWI5#MA0402.1;-2;0.00306144;1.45724;0.581982;8;GCGGCTGGCGGC;TGCTGGTT;+!Tcfcp2l1#MA0145.1;6;0.00500651;2.3831;0.713267;8;GCGGCTGGCGGC;CTGGTTTGAACTGG;-!CTCF#MA0139.1;6;0.00557264;2.65257;0.713267;12;GCGGCTGGCGGC;TGGCCACCAGGGGGCGCTA;+!Hand1::Tcfe2a#MA0092.1;-1;0.00600327;2.85755;0.713267;10;GCGGCTGGCGGC;GGTCTGGCAT;+!NHLH1#MA0048.1;2;0.00700823;3.33592;0.717621;10;GCGGCTGGCGGC;GCGCAGCTGCGT;+!SP1#MA0079.1;0;0.0075499;3.59375;0.717621;10;GCGGCTGGCGGC;GGGGCGGGGT;+!YY1#MA0095.1;-3;0.01073;5.10746;0.740809;6;GCGGCTGGCGGC;GATGGC;-!TFAP2A#MA0003.1;0;0.0110732;5.27084;0.740809;9;GCGGCTGGCGGC;CCCCCGGGC;-!opa#MA0456.1;-1;0.0114698;5.45964;0.740809;11;GCGGCTGGCGGC;CAGCGGGGGGTC;-!CRZ1#MA0285.1;0;0.0130289;6.20175;0.740809;9;GCGGCTGGCGGC;GTGGCTTAG;-!Tal1::Gata1#MA0140.1;-4;0.0131338;6.25171;0.740809;8;GCGGCTGGCGGC;CTGGTGGGGACAGATAAG;+!Myc#MA0147.1;1;0.0145369;6.91955;0.740809;9;GCGGCTGGCGGC;CGCACGTGGC;+!SOK2#MA0385.1;-1;0.015051;7.16427;0.740809;11;GCGGCTGGCGGC;TGCCTGCAGGT;-!Mycn#MA0104.2;1;0.0161405;7.68288;0.740809;9;GCGGCTGGCGGC;CGCACGTGGC;+!STP2#MA0395.1;-1;0.0163671;7.79073;0.740809;11;GCGGCTGGCGGC;TGATCGGCGCCGCACGACGA;+!PHD1#MA0355.1;-2;0.0178983;8.51958;0.773291;10;GCGGCTGGCGGC;TGCTGCAGGT;-!RPN4#MA0373.1;-3;0.0191093;9.09601;0.789716;7;GCGGCTGGCGGC;GGTGGCG;+!MET31#MA0333.1;-1;0.0208482;9.92372;0.792651;9;GCGGCTGGCGGC;GGTGTGGCG;+ | |||
}} | }} |
Latest revision as of 12:50, 7 September 2012
Full Name: CNhs12093_bu_f2
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
ACE2#MA0267.1 | -2 | 0.000244704 | 0.116479 | 0.232592 | 7 | GCGGCTGGCGGC | TGCTGGT | - |
Myf#MA0055.1 | 2 | 0.00154428 | 0.735077 | 0.581982 | 10 | GCGGCTGGCGGC | CAGCAGCTGCTG | - |
Mafb#MA0117.1 | -3 | 0.00268802 | 1.2795 | 0.581982 | 8 | GCGGCTGGCGGC | GCTGACGG | + |
brk#MA0213.1 | -4 | 0.00306144 | 1.45724 | 0.581982 | 8 | GCGGCTGGCGGC | CTGGCGCC | + |
SWI5#MA0402.1 | -2 | 0.00306144 | 1.45724 | 0.581982 | 8 | GCGGCTGGCGGC | TGCTGGTT | + |
Tcfcp2l1#MA0145.1 | 6 | 0.00500651 | 2.3831 | 0.713267 | 8 | GCGGCTGGCGGC | CTGGTTTGAACTGG | - |
CTCF#MA0139.1 | 6 | 0.00557264 | 2.65257 | 0.713267 | 12 | GCGGCTGGCGGC | TGGCCACCAGGGGGCGCTA | + |
Hand1::Tcfe2a#MA0092.1 | -1 | 0.00600327 | 2.85755 | 0.713267 | 10 | GCGGCTGGCGGC | GGTCTGGCAT | + |
NHLH1#MA0048.1 | 2 | 0.00700823 | 3.33592 | 0.717621 | 10 | GCGGCTGGCGGC | GCGCAGCTGCGT | + |
SP1#MA0079.1 | 0 | 0.0075499 | 3.59375 | 0.717621 | 10 | GCGGCTGGCGGC | GGGGCGGGGT | + |
YY1#MA0095.1 | -3 | 0.01073 | 5.10746 | 0.740809 | 6 | GCGGCTGGCGGC | GATGGC | - |
TFAP2A#MA0003.1 | 0 | 0.0110732 | 5.27084 | 0.740809 | 9 | GCGGCTGGCGGC | CCCCCGGGC | - |
opa#MA0456.1 | -1 | 0.0114698 | 5.45964 | 0.740809 | 11 | GCGGCTGGCGGC | CAGCGGGGGGTC | - |
CRZ1#MA0285.1 | 0 | 0.0130289 | 6.20175 | 0.740809 | 9 | GCGGCTGGCGGC | GTGGCTTAG | - |
Tal1::Gata1#MA0140.1 | -4 | 0.0131338 | 6.25171 | 0.740809 | 8 | GCGGCTGGCGGC | CTGGTGGGGACAGATAAG | + |
Myc#MA0147.1 | 1 | 0.0145369 | 6.91955 | 0.740809 | 9 | GCGGCTGGCGGC | CGCACGTGGC | + |
SOK2#MA0385.1 | -1 | 0.015051 | 7.16427 | 0.740809 | 11 | GCGGCTGGCGGC | TGCCTGCAGGT | - |
Mycn#MA0104.2 | 1 | 0.0161405 | 7.68288 | 0.740809 | 9 | GCGGCTGGCGGC | CGCACGTGGC | + |
STP2#MA0395.1 | -1 | 0.0163671 | 7.79073 | 0.740809 | 11 | GCGGCTGGCGGC | TGATCGGCGCCGCACGACGA | + |
PHD1#MA0355.1 | -2 | 0.0178983 | 8.51958 | 0.773291 | 10 | GCGGCTGGCGGC | TGCTGCAGGT | - |
RPN4#MA0373.1 | -3 | 0.0191093 | 9.09601 | 0.789716 | 7 | GCGGCTGGCGGC | GGTGGCG | + |
MET31#MA0333.1 | -1 | 0.0208482 | 9.92372 | 0.792651 | 9 | GCGGCTGGCGGC | GGTGTGGCG | + |