MacroAPE 1083:2-TTWAACCS: Difference between revisions
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(Created page with "{{Macroape_1083
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465!10717-109I6;0.0188212!10455-106G5;0.37167!10534-107G3;0.229574!10429-106D6;0.122847!10464-106H5;0.052097!10827-111C8;0.211911!10789-110H6;0.365389!10828-111C9;0.663091!10788-110H5;0.224739!10792-110H9;0.230455!10765-110E9;0.305642!10829-111D1;0.309359!10830-111D2;0.0977716!10831-111D3;0.166283!10832-111D4;0.641979!10833-111D5;0.0624593!10764-110E8;0.126961!10770-110F5;0.111498!10399-106A3;0.427352!10400-106A4;0.0603869!10405-106A9;0.0433089!10834-111D6;0.0360228!10835-111D7;0.107869!10836-111D8;0.117201!10837-111D9;0.0910687!10699-109G6;0.312495!10802-111A1;0.235186!10796-110I4;0.543214!10010-101C1;0.306216!10810-111A9;0.00250227!10421-106C7;0.0791613!10708-109H6;0.437795!12235-129G3;0.452379!12236-129G4;0.266877!12237-129G5;0.0282068!10167-103B5;0.0260593!10151-102I7;0.233069!10428-106D5;0.211999!10795-110I3;0.749723!10805-111A4;0.289712!10052-101G7;0.0543437!10189-103D9;0.00271946!10589-108D4;0.0771332!10425-106D2;0.09428!10427-106D4;0.11751!10702-109G9;0.215227!10432-106D9;0.0137513!10496-107C1;0.116773!10718-109I7;0.0656499!10011-101C2;0.199324!10053-101G8;0.081146!10686-109F2;0.771532!10084-102B3;0.122237!10012-101C3;0.605374!10085-102B4;0.408483!10482-107A5;0.281171!10419-106C5;0.0362186!10080-102A8;0.182291!10760-110E4;0.00824557!10709-109H7;0.0845311!10710-109H8;0.587643!10703-109H1;0.680979!10719-109I8;0.0251943!10642-109A3;0.014501!10177-103C6;0.307097!10164-103B2;0.356464!10173-103C2;0.198549!10166-103B4;0.339599!10083-102B2;0.349841!10188-103D8;0.864713!10552-107I3;0.794622!10553-107I4;0.13867!10013-101C4;0.216458!10536-107G5;0.065322!10618-108G6;0.599549!10423-106C9;0.171385!10785-110H2;0.0429288!12238-129G6;0.140266!12239-129G7;0.730723!12240-129G8;0.0251345!10416-106C2;0.981283!10801-110I9;0.168845!10766-110F1;0.431499!10824-111C5;0.482458!10825-111C6;0.414668!10826-111C7;0.413483!10454-106G4;0.384545!10409-106B4;0.213279!10638-108I8;0.639317!10636-108I6;0.0323481!10513-107D9;0.572208!10420-106C6;0.463899!10082-102B1;0.0131908!10014-101C5;0.0174497!10070-101I7;0.12012!10452-106G2;0.12585!10453-106G3;0.866494!10449-106F8;0.773614!10042-101F6;0.714095!10069-101I6;0.884209!10193-103E4;0.0770191!10631-108I1;0.433034!10438-106E6;0.194305!10488-107B2;0.0206236!10196-103E7;0.235175!10071-101I8;0.418424!10071-101I8;0.244992!10041-101F5;0.202749!10451-106G1;0.0433354!10450-106F9;0.153601!10604-108F1;0.212525!10605-108F2;0.241268!10606-108F3;0.135807!10603-108E9;0.149124!10497-107C2;0.0446694!10448-106F7;0.691018!10643-109A4;0.0123329!10426-106D3;0.034517!10431-106D8;0.0630494!10197-103E8;0.382393!10443-106F2;0.011311!10815-111B5;0.620846!10816-111B6;0.339517!10817-111B7;0.28564!10015-101C6;0.453239!10410-106B5;0.0817945!10054-101G9;0.720151!10758-110E2;0.687652!10711-109H9;0.28147!10040-101F4;0.347057!10470-106I2;0.269786!10415-106C1;0.118618!10198-103E9;0.277273!10614-108G2;0.0258796!10612-108F9;0.743437!10549-107H9;0.355557!10615-108G3;0.00952247!10487-107B1;0.0476951!10433-106E1;0.197388!10688-109F4;0.918072!10444-106F3;0.218492!10444-106F3;0.584287!10485-107A8;0.398734!10413-106B8;0.135793!10175-103C4;0.000895092!10161-103A8;0.629663!12131-128D7;0.476304!10624-108H3;0.362157!10712-109I1;0.610769!10205-103F7;0.569664!10206-103F8;0.00679013!10207-103F9;0.0522842!10050-101G5;0.0133969!10051-101G6;0.0406425!10016-101C7;0.0316207!10046-101G1;0.0512428!10778-110G4;0.260016!10633-108I3;0.00321148!10818-111B8;0.489956!10819-111B9;0.109647!10820-111C1;0.0999703!10484-107A7;0.0703606!10808-111A7;0.174269!10169-103B7;0.061471!10153-102I9;0.427854!13425-144D5;0.314869!13433-144E4;0.0763143!13437-144E8;0.122981!11904-125F5;0.0664001!11905-125F6;0.898791!10039-101F3;0.865175!10791-110H8;0.310236!10017-101C8;0.0298596!10045-101F9;0.653005!10509-107D5;0.636146!10839-111E2;0.0852881!10692-109F8;0.00134054!10079-102A7;0.725106!10078-102A6;0.0913684!10721-110A1;0.0188297!10569-108B2;0.069296!10570-108B3;0.132724!10571-108B4;0.118482!10647-109A8;0.272287!10752-110D5;0.633338!10782-110G8;0.546392!10726-110A6;0.947841!10018-101C9;0.702232!10086-102B5;0.786742!10182-103D2;0.647584!10165-103B3;0.668863!10499-107C4;0.362213!10408-106B3;0.219612!10019-101D1;0.200107!10068-101I5;0.115945!10075-102A3;0.564868!10077-102A5;0.0535111!10727-110A7;0.0968076!10775-110G1;0.27024!10412-106B7;0.0208459!12231-129F8;0.394675!12232-129F9;8.47689e-05!12233-129G1;0.00149973!12234-129G2;0.00224231!10414-106B9;0.00371776!10170-103B8;0.0639738!10183-103D3;0.159864!10150-102I6;0.113246!10174-103C3;0.199905!10155-103A2;0.981212!10038-101F2;0.857888!10838-111E1;0.977119!10759-110E3;0.209255!10514-107E1;0.0806141!10465-106H6;0.480632!10691-109F7;0.498597!10843-111E6;0.488476!10844-111E7;0.196883!11747-123G1;0.547963!11748-123G2;0.111403!11749-123G3;0.0131566!11750-123G4;0.346502!11751-123G5;0.0212754!11840-124H4;0.021268!11752-123G6;0.0252125!11753-123G7;0.0947202!11754-123G8;0.0802595!11755-123G9;0.131768!11756-123H1;0.0157072!11833-124G6;0.0244233!11760-123H5;0.0114476!11836-124G9;0.00809379!11758-123H3;0.646111!11835-124G8;0.0111364!11762-123H7;0.0152151!11838-124H2;0.00583082!11757-123H2;0.00391615!11759-123H4;0.102314!11761-123H6;0.142558!11842-124H6;0.0279552!11837-124H1;0.0181057!10568-108B1;0.0034906!13230-141I8;9.51826e-06!13231-141I9;0.0618673!10696-109G3;0.0195342!10493-107B7;0.692298!10494-107B8;0.980445!10850-111F4;0.260565!10851-111F5;0.900006!10852-111F6;0.190628!10853-111F7;0.311119!10854-111F8;0.735718!10855-111F9;0.0541212!10856-111G1;0.117209!10847-111F1;0.575906!10846-111E9;0.408585!10848-111F2;0.439345!10845-111E8;0.66645!10857-111G2;0.138251!10858-111G3;0.156815!10156-103A3;0.863713!11901-125F2;0.200397!11902-125F3;0.242126!11903-125F4;0.439569!10689-109F5;0.354674!10648-109A9;0.841402!10784-110H1;0.804394!10744-110C6;0.691396!10772-110F7;0.401754!10474-106I6;0.0965924!10600-108E6;0.228685!10684-109E9;0.911659!12226-129F3;0.351135!12227-129F4;0.174212!10508-107D4;0.038569!10539-107G8;0.0976523!10607-108F4;0.914983!10555-107I6;0.0475845!10774-110F9;0.482987!10637-108I7;0.0297025!10663-109C6;0.234358!10728-110A8;0.0374554!10729-110A9;0.144143!10430-106D7;0.0633108!10730-110B1;0.0225846!10813-111B3;0.413151!10812-111B2;0.440998!10037-101F1;0.191321!10172-103C1;0.348026!10163-103B1;0.295393!10076-102A4;0.343314!10073-102A1;0.494024!10036-101E9;0.257938!10195-103E6;0.590962!10277-104E7;0.416604!10434-106E2;0.41295!10550-107I1;0.000634294!10545-107H5;0.00629521!10544-107H4;0.128636!10704-109H2;0.600711!10510-107D6;0.0502736!10558-107I9;0.450553!10020-101D2;0.396782!10732-110B3;0.0557073!10049-101G4;0.0311403!10698-109G5;0.966549!10437-106E5;0.0624014!10417-106C3;0.404399!10035-101E8;0.729003!10171-103B9;0.412795!10157-103A4;0.199501!10034-101E7;0.22893!10072-101I9;0.375756!10199-103F1;0.133594!10200-103F2;0.472942!10697-109G4;0.0296301!10723-110A3;0.339251!10179-103C8;0.305539!10160-103A7;0.482796!10180-103C9;0.460923!10162-103A9;0.35834!10021-101D3;0.227761!10840-111E3;0.0136423!10706-109H4;0.400641!10033-101E6;0.889223!10032-101E5;0.70635!10490-107B4;0.411471!10439-106E7;0.163781!10022-101D4;0.0615277!10176-103C5;0.243834!10469-106I1;0.289075!10067-101I4;0.813113!10411-106B6;0.253246!10471-106I3;0.204989!10030-101E3;0.206457!10475-106I7;0.37178!10787-110H4;0.472238!10477-106I9;0.182575!10695-109G2;0.437233!11771-123I7;0.337357!11772-123I8;0.197587!11773-123I9;0.486076!10093-102C3;0.605902!10442-106F1;0.842805!10442-106F1;0.552339!10201-103F3;0.375983!10639-108I9;0.829761!11843-124H7;0.20397!11841-124H5;0.627611!10693-109F9;0.756181!10436-106E4;0.36086!10483-107A6;0.174665!10282-104F3;0.528046!10023-101D5;0.0292587!10066-101I3;0.00042005!10065-101I2;0.136132!10800-110I8;0.23111!10610-108F7;0.0560522!10841-111E4;0.410812!10541-107H1;0.131578!10842-111E5;0.00260967!10562-108A4;0.0464248!10024-101D6;0.25951!10064-101I1;0.28754!10609-108F6;0.116589!10048-101G3;0.0328141!10781-110G7;0.0663194!10181-103D1;0.0906113!10159-103A6;0.824516!10056-101H2;0.556055!10737-110B8;0.523551!10025-101D7;0.00749495!10044-101F8;0.533651!10424-106D1;0.699802!10463-106H4;0.0554938!10616-108G4;0.0254545!10486-107A9;0.263047!10062-101H8;0.00107432!10202-103F4;0.0141868!10158-103A5;0.0739915!10441-106E9;0.627955!10031-101E4;0.81578!10063-101H9;0.428813!10063-101H9;0.155369!11763-123H8;0.66093!11765-123I1;0.0192994!11768-123I4;0.00138417!10807-111A6;0.0391802!10790-110H7;0.18225!10798-110I6;0.0003915!10786-110H3;0.232435!10591-108D6;0.0650007!10593-108D8;0.0367885!10590-108D5;0.072948!10026-101D8;0.342437!10096-102C6;0.0154966!10168-103B6;0.453257!10154-103A1;0.548906!10209-103G2;0.216836!10061-101H7;0.0461807!10027-101D9;0.106085!10043-101F7;0.232405!10783-110G9;0.807245!10028-101E1;0.219006!10060-101H6;0.0414401!10203-103F5;0.0751502!10059-101H5;0.115303!10047-101G2;0.268771!10029-101E2;0.112099!10058-101H4;0.0173572!10418-106C4;0.0688746!10492-107B6;0.100256!10694-109G1;0.344555!10797-110I5;0.39069!10057-101H3;0.567611!10100-102D1;0.0648702!10055-101H1;0.100588!10204-103F6;0.159277!10191-103E2;0.16052!10563-108A5;0.00715955 | ||
|name=2-TTWAACCS,BestGuess:PB0184.1_Tbp_2(0.667480797491517),T:2682.0(47.74%),B:15905.8(37.21%),P:1e-50 | |name=2-TTWAACCS,BestGuess:PB0184.1_Tbp_2(0.667480797491517),T:2682.0(47.74%),B:15905.8(37.21%),P:1e-50 | ||
|tomtom_result=TBP#MA0108.2;4;0.00273732;1.30296;1;8;TTAAACCG;GTATAAAAGGCGGGG;+!TBP#MA0108.2;4;0.00273732;1.30296;1;8;TTAAACCG;GTATAAAAGGCGGGG;+!run::Bgb#MA0242.1;-2;0.00779326;3.70959;1;6;TTAAACCG;TAACCGCAA;+!NHP6B#MA0346.1;12;0.00911804;4.34019;1;8;TTAAACCG;TTTATTTATATATAATATGA;+!YPR196W#MA0437.1;1;0.0102205;4.86496;1;8;TTAAACCG;ATTTCTCCG;+!Pax4#MA0068.1;4;0.0125242;5.96154;1;8;TTAAACCG;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!myb.Ph3#MA0054.1;-2;0.0171732;8.17446;1;6;TTAAACCG;TAACCGTTT;+ | |||
}} | }} |
Latest revision as of 12:51, 7 September 2012
Full Name: 2-TTWAACCS,BestGuess:PB0184.1_Tbp_2(0.667480797491517),T:2682.0(47.74%),B:15905.8(37.21%),P:1e-50
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
TBP#MA0108.2 | 4 | 0.00273732 | 1.30296 | 1 | 8 | TTAAACCG | GTATAAAAGGCGGGG | + |
TBP#MA0108.2 | 4 | 0.00273732 | 1.30296 | 1 | 8 | TTAAACCG | GTATAAAAGGCGGGG | + |
run::Bgb#MA0242.1 | -2 | 0.00779326 | 3.70959 | 1 | 6 | TTAAACCG | TAACCGCAA | + |
NHP6B#MA0346.1 | 12 | 0.00911804 | 4.34019 | 1 | 8 | TTAAACCG | TTTATTTATATATAATATGA | + |
YPR196W#MA0437.1 | 1 | 0.0102205 | 4.86496 | 1 | 8 | TTAAACCG | ATTTCTCCG | + |
Pax4#MA0068.1 | 4 | 0.0125242 | 5.96154 | 1 | 8 | TTAAACCG | GAAAAATTTCCCATACTCCACTCCCCCCCC | + |
myb.Ph3#MA0054.1 | -2 | 0.0171732 | 8.17446 | 1 | 6 | TTAAACCG | TAACCGTTT | + |