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MacroAPE 1083:Motif999: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;144890;0;0;0!02;0;0;144890;0!03;0;0;144890;0!04;144890;0;0;0!05;40206;4901;86883;12900!06;0;0;144890;0 |macroape_1083_sample_pvalues=11376...")
 
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C8;0.577307!10789-110H6;0.685885!10828-111C9;0.541741!10788-110H5;0.411284!10792-110H9;0.882991!10765-110E9;0.600177!10829-111D1;0.751459!10830-111D2;0.908746!10831-111D3;0.507369!10832-111D4;0.800087!10833-111D5;0.801842!10764-110E8;0.873048!10770-110F5;0.490337!10399-106A3;0.591603!10400-106A4;0.946355!10405-106A9;0.982294!10834-111D6;0.977597!10835-111D7;0.619081!10836-111D8;0.477912!10837-111D9;0.565437!10699-109G6;0.882864!10802-111A1;0.694155!10796-110I4;0.96185!10010-101C1;0.111585!10810-111A9;0.145017!10421-106C7;0.013328!10708-109H6;0.869961!12235-129G3;0.0342974!12236-129G4;0.935136!12237-129G5;0.726644!10167-103B5;0.830056!10151-102I7;0.799565!10428-106D5;0.956579!10795-110I3;0.0992243!10805-111A4;0.970433!10052-101G7;0.00645728!10189-103D9;0.189137!10589-108D4;0.00752456!10425-106D2;0.0280819!10427-106D4;0.0523267!10702-109G9;0.916177!10432-106D9;0.577694!10496-107C1;0.316912!10718-109I7;0.581509!10011-101C2;0.840638!10053-101G8;0.21863!10686-109F2;0.0392543!10084-102B3;0.549424!10012-101C3;0.90598!10085-102B4;0.917784!10482-107A5;0.640493!10419-106C5;0.391754!10080-102A8;0.237836!10760-110E4;0.184243!10709-109H7;0.251052!10710-109H8;0.145044!10703-109H1;0.34799!10719-109I8;0.0164147!10642-109A3;0.0213708!10177-103C6;0.104697!10164-103B2;0.805247!10173-103C2;0.990969!10166-103B4;0.578332!10083-102B2;0.805362!10188-103D8;0.734214!10552-107I3;0.954381!10553-107I4;0.0390878!10013-101C4;0.343636!10536-107G5;0.258262!10618-108G6;0.0408065!10423-106C9;0.0928231!10785-110H2;0.0877944!12238-129G6;0.0766165!12239-129G7;0.299687!12240-129G8;0.963162!10416-106C2;0.213183!10801-110I9;0.97411!10766-110F1;0.768689!10824-111C5;0.568093!10825-111C6;0.174209!10826-111C7;0.201557!10454-106G4;0.228436!10409-106B4;0.16435!10638-108I8;0.961264!10636-108I6;0.146524!10513-107D9;0.316188!10420-106C6;0.0334164!10082-102B1;0.00606391!10014-101C5;0.146385!10070-101I7;0.0966004!10452-106G2;0.123612!10453-106G3;0.258264!10449-106F8;0.479549!10042-101F6;0.471616!10069-101I6;0.966354!10193-103E4;0.939322!10631-108I1;0.814643!10438-106E6;0.631433!10488-107B2;0.356085!10196-103E7;0.0372978!10071-101I8;0.300082!10071-101I8;0.141854!10041-101F5;0.767492!10451-106G1;0.0460086!10450-106F9;0.0627349!10604-108F1;0.041226!10605-108F2;0.313906!10606-108F3;0.0611754!10603-108E9;0.127487!10497-107C2;0.0712865!10448-106F7;0.486659!10643-109A4;0.151187!10426-106D3;0.153685!10431-106D8;0.631732!10197-103E8;0.0609851!10443-106F2;0.280904!10815-111B5;0.0393592!10816-111B6;0.0576847!10817-111B7;0.0542298!10015-101C6;0.0649329!10410-106B5;0.309692!10054-101G9;0.00172321!10758-110E2;0.980415!10711-109H9;0.779923!10040-101F4;0.723794!10470-106I2;0.855754!10415-106C1;0.300665!10198-103E9;0.774201!10614-108G2;0.109841!10612-108F9;0.170631!10549-107H9;0.24541!10615-108G3;0.011134!10487-107B1;0.0129842!10433-106E1;0.0998327!10688-109F4;0.0480098!10444-106F3;0.809848!10444-106F3;0.522286!10485-107A8;0.574622!10413-106B8;0.211765!10175-103C4;0.243903!10161-103A8;0.858492!12131-128D7;0.903091!10624-108H3;0.078876!10712-109I1;0.743277!10205-103F7;0.809277!10206-103F8;0.756809!10207-103F9;0.718208!10050-101G5;0.357837!10051-101G6;0.772656!10016-101C7;0.765427!10046-101G1;0.827508!10778-110G4;0.871603!10633-108I3;0.927687!10818-111B8;0.0550568!10819-111B9;0.0192774!10820-111C1;0.020549!10484-107A7;0.0187081!10808-111A7;0.0151474!10169-103B7;0.947008!10153-102I9;0.786422!13425-144D5;0.945669!13433-144E4;0.00991809!13437-144E8;0.00672679!11904-125F5;0.00379867!11905-125F6;0.308201!10039-101F3;0.333061!10791-110H8;0.890166!10017-101C8;0.319796!10045-101F9;0.15787!10509-107D5;0.492774!10839-111E2;0.0181096!10692-109F8;0.0181074!10079-102A7;0.047894!10078-102A6;0.477132!10721-110A1;0.946223!10569-108B2;0.0196926!10570-108B3;0.717334!10571-108B4;0.780969!10647-109A8;0.890066!10752-110D5;0.181939!10782-110G8;0.964645!10726-110A6;0.5013!10018-101C9;0.447699!10086-102B5;0.662563!10182-103D2;0.972325!10165-103B3;0.915433!10499-107C4;0.994146!10408-106B3;0.394216!10019-101D1;0.99584!10068-101I5;0.0321917!10075-102A3;0.29078!10077-102A5;0.0148716!10727-110A7;0.00716699!10775-110G1;0.699936!10412-106B7;0.835994!12231-129F8;0.369528!12232-129F9;0.223626!12233-129G1;0.287564!12234-129G2;0.191737!10414-106B9;0.092118!10170-103B8;0.0159668!10183-103D3;0.626999!10150-102I6;0.765741!10174-103C3;0.969562!10155-103A2;0.802722!10038-101F2;0.842807!10838-111E1;0.901582!10759-110E3;0.0112895!10514-107E1;0.0428054!10465-106H6;0.0886663!10691-109F7;0.0570838!10843-111E6;0.506453!10844-111E7;0.0379683!11747-123G1;0.0120061!11748-123G2;0.543452!11749-123G3;0.723485!11750-123G4;0.531535!11751-123G5;0.258411!11840-124H4;0.548989!11752-123G6;0.549721!11753-123G7;0.339143!11754-123G8;0.967105!11755-123G9;0.460353!11756-123H1;0.426273!11833-124G6;0.722483!11760-123H5;0.77871!11836-124G9;0.872843!11758-123H3;0.736627!11835-124G8;0.876016!11762-123H7;0.717305!11838-124H2;0.957032!11757-123H2;0.8155!11759-123H4;0.139828!11761-123H6;0.977507!11842-124H6;0.905806!11837-124H1;0.62671!10568-108B1;0.544778!13230-141I8;0.0758313!13231-141I9;0.890247!10696-109G3;0.99593!10493-107B7;0.697795!10494-107B8;0.0269085!10850-111F4;0.454325!10851-111F5;0.0208089!10852-111F6;0.479321!10853-111F7;0.771287!10854-111F8;0.0222158!10855-111F9;0.0354854!10856-111G1;0.0758912!10847-111F1;0.298692!10846-111E9;0.132056!10848-111F2;0.57731!10845-111E8;0.422086!10857-111G2;0.0926338!10858-111G3;0.0177883!10156-103A3;0.169727!11901-125F2;0.969694!11902-125F3;0.741964!11903-125F4;0.612858!10689-109F5;0.567557!10648-109A9;0.0818893!10784-110H1;0.024996!10744-110C6;0.921748!10772-110F7;0.705523!10474-106I6;0.91135!10600-108E6;0.938546!10684-109E9;0.0364927!12226-129F3;0.547992!12227-129F4;0.09046!10508-107D4;0.534521!10539-107G8;0.0646444!10607-108F4;0.00820623!10555-107I6;0.00189983!10774-110F9;0.0244709!10637-108I7;0.0147196!10663-109C6;0.00141696!10728-110A8;0.0077739!10729-110A9;0.00831438!10430-106D7;0.869907!10730-110B1;0.367605!10813-111B3;0.0173877!10812-111B2;0.592808!10037-101F1;0.546627!10172-103C1;0.921357!10163-103B1;0.706613!10076-102A4;0.909554!10073-102A1;0.864183!10036-101E9;0.614889!10195-103E6;0.872179!10277-104E7;0.930099!10434-106E2;0.924246!10550-107I1;0.343446!10545-107H5;0.0360819!10544-107H4;0.392952!10704-109H2;0.162032!10510-107D6;0.865689!10558-107I9;0.990986!10020-101D2;0.178591!10732-110B3;0.341728!10049-101G4;0.0818686!10698-109G5;0.208219!10437-106E5;0.0726263!10417-106C3;0.199597!10035-101E8;0.802427!10171-103B9;0.861442!10157-103A4;0.714282!10034-101E7;0.998142!10072-101I9;0.881969!10199-103F1;0.586426!10200-103F2;0.0475284!10697-109G4;0.593008!10723-110A3;0.0416653!10179-103C8;0.905394!10160-103A7;0.608975!10180-103C9;0.767795!10162-103A9;0.345974!10021-101D3;0.622653!10840-111E3;0.0646491!10706-109H4;0.913402!10033-101E6;0.871459!10032-101E5;0.869453!10490-107B4;0.816152!10439-106E7;0.0258053!10022-101D4;0.163253!10176-103C5;0.267133!10469-106I1;0.790579!10067-101I4;0.174441!10411-106B6;0.545739!10471-106I3;0.41342!10030-101E3;0.0208653!10475-106I7;0.740187!10787-110H4;0.00816009!10477-106I9;0.0148179!10695-109G2;0.10728!11771-123I7;0.669613!11772-123I8;0.325612!11773-123I9;0.427745!10093-102C3;0.940659!10442-106F1;0.0400865!10442-106F1;0.0922553!10201-103F3;0.0979045!10639-108I9;0.302865!11843-124H7;0.595172!11841-124H5;0.0253737!10693-109F9;0.0823259!10436-106E4;0.145061!10483-107A6;0.238141!10282-104F3;0.768922!10023-101D5;0.0621572!10066-101I3;0.354!10065-101I2;0.996262!10800-110I8;0.542275!10610-108F7;0.0265695!10841-111E4;0.0322528!10541-107H1;0.00408503!10842-111E5;0.0446947!10562-108A4;0.0148575!10024-101D6;0.190492!10064-101I1;0.0202136!10609-108F6;0.167096!10048-101G3;0.206495!10781-110G7;0.490873!10181-103D1;0.293862!10159-103A6;0.984161!10056-101H2;0.79809!10737-110B8;0.815736!10025-101D7;0.564924!10044-101F8;0.0209562!10424-106D1;0.0215601!10463-106H4;0.889344!10616-108G4;0.62766!10486-107A9;0.304656!10062-101H8;0.0944049!10202-103F4;0.189067!10158-103A5;0.0281836!10441-106E9;0.863973!10031-101E4;0.00423796!10063-101H9;0.867521!10063-101H9;0.703241!11763-123H8;0.222817!11765-123I1;0.922719!11768-123I4;0.925446!10807-111A6;0.830792!10790-110H7;0.013422!10798-110I6;0.00283993!10786-110H3;0.000850291!10591-108D6;0.0687513!10593-108D8;0.00279572!10590-108D5;0.109215!10026-101D8;0.00463139!10096-102C6;0.511622!10168-103B6;0.0145192!10154-103A1;0.806968!10209-103G2;0.906144!10061-101H7;0.319036!10027-101D9;0.649165!10043-101F7;0.0137687!10783-110G9;0.00209582!10028-101E1;0.20286!10060-101H6;0.611753!10203-103F5;0.660793!10059-101H5;0.665332!10047-101G2;0.972841!10029-101E2;0.000791252!10058-101H4;0.0220228!10418-106C4;0.509462!10492-107B6;0.151204!10694-109G1;0.138566!10797-110I5;0.9272!10057-101H3;0.999465!10100-102D1;0.448113!10055-101H1;0.253323!10204-103F6;0.494743!10191-103E2;0.241238!10563-108A5;0.0632046
|name=motif999
|name=motif999
|tomtom_result=SPI1#MA0080.2;0;0.000855631;0.40728;0.814561;6;AGGAGG;AGGAAGT;+!GCR2#MA0305.1;0;0.00365815;1.74128;0.880066;6;AGGAGG;AGGAAGC;-!EWSR1-FLI1#MA0149.1;3;0.00435412;2.07256;0.880066;6;AGGAGG;GGAAGGAAGGAAGGAAGG;+!Stat3#MA0144.1;4;0.00515203;2.45237;0.880066;6;AGGAGG;TTCCAGGAAG;+!FEV#MA0156.1;1;0.00567953;2.70346;0.880066;6;AGGAGG;CAGGAAAT;+!ELF5#MA0136.1;1;0.00581243;2.76672;0.880066;6;AGGAGG;AAGGAAGTA;-!SPI1#MA0080.2;0;0.00706099;3.36103;0.880066;6;AGGAGG;CGGAAG;+!ETS1#MA0098.1;0;0.00739551;3.52026;0.880066;6;AGGAGG;CGGAAA;-!Klf4#MA0039.1;3;0.00930998;4.43155;0.984789;6;AGGAGG;TAAAGGAAGG;+!Eip74EF#MA0026.1;1;0.0147726;7.03176;1;6;AGGAGG;CCGGAAG;+!GCR1#MA0304.1;0;0.0148068;7.04804;1;6;AGGAGG;TGGAAGCC;+!SP1#MA0079.2;2;0.0177749;8.46085;1;6;AGGAGG;GGGGGCGGGG;-
}}
}}

Latest revision as of 13:01, 7 September 2012

Full Name: motif999

Motif matrix
POACGT
01144890000
02001448900
03001448900
04144890000
054020649018688312900
06001448900

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPI1#MA0080.200.0008556310.407280.8145616AGGAGGAGGAAGT+
GCR2#MA0305.100.003658151.741280.8800666AGGAGGAGGAAGC-
EWSR1-FLI1#MA0149.130.004354122.072560.8800666AGGAGGGGAAGGAAGGAAGGAAGG+
Stat3#MA0144.140.005152032.452370.8800666AGGAGGTTCCAGGAAG+
FEV#MA0156.110.005679532.703460.8800666AGGAGGCAGGAAAT+
ELF5#MA0136.110.005812432.766720.8800666AGGAGGAAGGAAGTA-
SPI1#MA0080.200.007060993.361030.8800666AGGAGGCGGAAG+
ETS1#MA0098.100.007395513.520260.8800666AGGAGGCGGAAA-
Klf4#MA0039.130.009309984.431550.9847896AGGAGGTAAAGGAAGG+
Eip74EF#MA0026.110.01477267.0317616AGGAGGCCGGAAG+
GCR1#MA0304.100.01480687.0480416AGGAGGTGGAAGCC+
SP1#MA0079.220.01777498.4608516AGGAGGGGGGGCGGGG-
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