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MacroAPE 1083:Motif TGGAGN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;296!02;0;0;296;0!03;0;0;296;0!04;296;0;0;0!05;0;0;296;0!06;0;296;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.571667!11327-117E4;...")
 
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10827-111C8;0.680295!10789-110H6;0.930679!10828-111C9;0.291983!10788-110H5;0.258171!10792-110H9;0.744982!10765-110E9;0.719802!10829-111D1;0.490678!10830-111D2;0.978413!10831-111D3;0.788666!10832-111D4;0.799435!10833-111D5;0.796429!10764-110E8;0.713176!10770-110F5;0.53967!10399-106A3;0.966542!10400-106A4;0.804171!10405-106A9;0.974547!10834-111D6;0.794087!10835-111D7;0.92717!10836-111D8;0.633144!10837-111D9;0.446721!10699-109G6;0.539141!10802-111A1;0.603425!10796-110I4;0.683238!10010-101C1;0.272091!10810-111A9;0.92141!10421-106C7;0.934806!10708-109H6;0.690634!12235-129G3;0.661685!12236-129G4;0.680707!12237-129G5;0.931654!10167-103B5;0.873059!10151-102I7;0.439193!10428-106D5;0.283661!10795-110I3;0.677576!10805-111A4;0.511455!10052-101G7;0.840609!10189-103D9;0.913153!10589-108D4;0.792431!10425-106D2;0.979887!10427-106D4;0.816269!10702-109G9;0.298054!10432-106D9;0.938374!10496-107C1;0.854268!10718-109I7;0.589372!10011-101C2;0.939403!10053-101G8;0.704399!10686-109F2;0.0906823!10084-102B3;0.486045!10012-101C3;0.391436!10085-102B4;0.39605!10482-107A5;0.297173!10419-106C5;0.954992!10080-102A8;0.38595!10760-110E4;0.916524!10709-109H7;0.582708!10710-109H8;0.902853!10703-109H1;0.88505!10719-109I8;0.608772!10642-109A3;0.723798!10177-103C6;0.272822!10164-103B2;0.230205!10173-103C2;0.26694!10166-103B4;0.131425!10083-102B2;0.308347!10188-103D8;0.245633!10552-107I3;0.494445!10553-107I4;0.770042!10013-101C4;0.589057!10536-107G5;0.507097!10618-108G6;0.569242!10423-106C9;0.947774!10785-110H2;0.97211!12238-129G6;0.564111!12239-129G7;0.462304!12240-129G8;0.638554!10416-106C2;0.319971!10801-110I9;0.812348!10766-110F1;0.885789!10824-111C5;0.787124!10825-111C6;0.983065!10826-111C7;0.977548!10454-106G4;0.879968!10409-106B4;0.81794!10638-108I8;0.730962!10636-108I6;0.639089!10513-107D9;0.599183!10420-106C6;0.881579!10082-102B1;0.409783!10014-101C5;0.553951!10070-101I7;0.791447!10452-106G2;0.727186!10453-106G3;0.661289!10449-106F8;0.520187!10042-101F6;0.504531!10069-101I6;0.381734!10193-103E4;0.759358!10631-108I1;0.301439!10438-106E6;0.895481!10488-107B2;0.783381!10196-103E7;0.689223!10071-101I8;0.332533!10071-101I8;0.728591!10041-101F5;0.383481!10451-106G1;0.73214!10450-106F9;0.393531!10604-108F1;0.338019!10605-108F2;0.992028!10606-108F3;0.743953!10603-108E9;0.875259!10497-107C2;0.760236!10448-106F7;0.227211!10643-109A4;0.656423!10426-106D3;0.745259!10431-106D8;0.856777!10197-103E8;0.577163!10443-106F2;0.522013!10815-111B5;0.235533!10816-111B6;0.346296!10817-111B7;0.261878!10015-101C6;0.404959!10410-106B5;0.409364!10054-101G9;0.119109!10758-110E2;0.449188!10711-109H9;0.364683!10040-101F4;0.919586!10470-106I2;0.274197!10415-106C1;0.600977!10198-103E9;0.428012!10614-108G2;0.563009!10612-108F9;0.72031!10549-107H9;0.995396!10615-108G3;0.310632!10487-107B1;0.240011!10433-106E1;0.289105!10688-109F4;0.104269!10444-106F3;0.610508!10444-106F3;0.968519!10485-107A8;0.781434!10413-106B8;0.27514!10175-103C4;0.658532!10161-103A8;0.321676!12131-128D7;0.297412!10624-108H3;0.758517!10712-109I1;0.736555!10205-103F7;0.632653!10206-103F8;0.682323!10207-103F9;0.684731!10050-101G5;0.413007!10051-101G6;0.660132!10016-101C7;0.828847!10046-101G1;0.949435!10778-110G4;0.689043!10633-108I3;0.523053!10818-111B8;0.367901!10819-111B9;0.707219!10820-111C1;0.75214!10484-107A7;0.729407!10808-111A7;0.413653!10169-103B7;0.863068!10153-102I9;0.245996!13425-144D5;0.28193!13433-144E4;0.490201!13437-144E8;0.613329!11904-125F5;0.783206!11905-125F6;0.78572!10039-101F3;0.710566!10791-110H8;0.24667!10017-101C8;0.872306!10045-101F9;0.98329!10509-107D5;0.611292!10839-111E2;0.310224!10692-109F8;0.418745!10079-102A7;0.792067!10078-102A6;0.81227!10721-110A1;0.717502!10569-108B2;0.280923!10570-108B3;0.87961!10571-108B4;0.741285!10647-109A8;0.513738!10752-110D5;0.765394!10782-110G8;0.848757!10726-110A6;0.0964222!10018-101C9;0.813147!10086-102B5;0.188622!10182-103D2;0.372708!10165-103B3;0.397828!10499-107C4;0.47858!10408-106B3;0.180634!10019-101D1;0.346873!10068-101I5;0.866396!10075-102A3;0.692147!10077-102A5;0.770559!10727-110A7;0.321741!10775-110G1;0.620344!10412-106B7;0.513941!12231-129F8;0.454871!12232-129F9;0.347362!12233-129G1;0.387124!12234-129G2;0.341643!10414-106B9;0.17605!10170-103B8;0.92693!10183-103D3;0.349689!10150-102I6;0.22473!10174-103C3;0.241309!10155-103A2;0.699492!10038-101F2;0.53499!10838-111E1;0.564859!10759-110E3;0.797226!10514-107E1;0.417015!10465-106H6;0.161399!10691-109F7;0.399636!10843-111E6;0.700514!10844-111E7;0.636884!11747-123G1;0.630008!11748-123G2;0.712828!11749-123G3;0.772014!11750-123G4;0.717832!11751-123G5;0.485345!11840-124H4;0.78957!11752-123G6;0.756879!11753-123G7;0.243531!11754-123G8;0.63954!11755-123G9;0.673118!11756-123H1;0.974028!11833-124G6;0.883951!11760-123H5;0.936194!11836-124G9;0.832191!11758-123H3;0.615388!11835-124G8;0.820947!11762-123H7;0.790638!11838-124H2;0.657411!11757-123H2;0.983014!11759-123H4;0.819566!11761-123H6;0.642843!11842-124H6;0.717617!11837-124H1;0.83778!10568-108B1;0.502798!13230-141I8;0.155776!13231-141I9;0.480322!10696-109G3;0.337245!10493-107B7;0.388859!10494-107B8;0.662444!10850-111F4;0.398203!10851-111F5;0.502532!10852-111F6;0.139026!10853-111F7;0.859509!10854-111F8;0.253866!10855-111F9;0.396774!10856-111G1;0.403465!10847-111F1;0.101251!10846-111E9;0.51586!10848-111F2;0.371891!10845-111E8;0.755875!10857-111G2;0.727206!10858-111G3;0.51862!10156-103A3;0.816664!11901-125F2;0.259547!11902-125F3;0.0282205!11903-125F4;0.0472111!10689-109F5;0.079514!10648-109A9;0.852997!10784-110H1;0.99186!10744-110C6;0.427943!10772-110F7;0.816434!10474-106I6;0.771618!10600-108E6;0.717984!10684-109E9;0.234361!12226-129F3;0.209891!12227-129F4;0.776619!10508-107D4;0.513334!10539-107G8;0.99313!10607-108F4;0.728172!10555-107I6;0.598714!10774-110F9;0.583321!10637-108I7;0.398787!10663-109C6;0.680144!10728-110A8;0.891771!10729-110A9;0.900675!10430-106D7;0.0246204!10730-110B1;0.927489!10813-111B3;0.51574!10812-111B2;0.76546!10037-101F1;0.654506!10172-103C1;0.300817!10163-103B1;0.301458!10076-102A4;0.226264!10073-102A1;0.365552!10036-101E9;0.477273!10195-103E6;0.281939!10277-104E7;0.31069!10434-106E2;0.752757!10550-107I1;0.962041!10545-107H5;0.526178!10544-107H4;0.466912!10704-109H2;0.44853!10510-107D6;0.262205!10558-107I9;0.960364!10020-101D2;0.610149!10732-110B3;0.977618!10049-101G4;0.696621!10698-109G5;0.430034!10437-106E5;0.749903!10417-106C3;0.374996!10035-101E8;0.523651!10171-103B9;0.294381!10157-103A4;0.272515!10034-101E7;0.226086!10072-101I9;0.32768!10199-103F1;0.441251!10200-103F2;0.596061!10697-109G4;0.478293!10723-110A3;0.194603!10179-103C8;0.707036!10160-103A7;0.437528!10180-103C9;0.345872!10162-103A9;0.516027!10021-101D3;0.483222!10840-111E3;0.614434!10706-109H4;0.377065!10033-101E6;0.0862881!10032-101E5;0.416916!10490-107B4;0.299913!10439-106E7;0.529072!10022-101D4;0.890339!10176-103C5;0.417225!10469-106I1;0.249804!10067-101I4;0.759407!10411-106B6;0.184654!10471-106I3;0.92269!10030-101E3;0.662804!10475-106I7;0.646122!10787-110H4;0.954451!10477-106I9;0.915746!10695-109G2;0.352876!11771-123I7;0.21263!11772-123I8;0.456496!11773-123I9;0.0824688!10093-102C3;0.409797!10442-106F1;0.44962!10442-106F1;0.633316!10201-103F3;0.693061!10639-108I9;0.65701!11843-124H7;0.61267!11841-124H5;0.672124!10693-109F9;0.760982!10436-106E4;0.619388!10483-107A6;0.500022!10282-104F3;0.435732!10023-101D5;0.841668!10066-101I3;0.729561!10065-101I2;0.478159!10800-110I8;0.474533!10610-108F7;0.698037!10841-111E4;0.218741!10541-107H1;0.952347!10842-111E5;0.976662!10562-108A4;0.525483!10024-101D6;0.555954!10064-101I1;0.829952!10609-108F6;0.977011!10048-101G3;0.805372!10781-110G7;0.556989!10181-103D1;0.621527!10159-103A6;0.571478!10056-101H2;0.515646!10737-110B8;0.53428!10025-101D7;0.0190251!10044-101F8;0.669207!10424-106D1;0.861066!10463-106H4;0.559555!10616-108G4;0.655949!10486-107A9;0.874259!10062-101H8;0.586452!10202-103F4;0.891525!10158-103A5;0.320956!10441-106E9;0.539117!10031-101E4;0.917542!10063-101H9;0.266871!10063-101H9;0.517819!11763-123H8;0.534593!11765-123I1;0.341714!11768-123I4;0.615503!10807-111A6;0.379602!10790-110H7;0.822449!10798-110I6;0.58698!10786-110H3;0.65199!10591-108D6;0.374786!10593-108D8;0.34967!10590-108D5;0.509142!10026-101D8;0.479852!10096-102C6;0.471107!10168-103B6;0.431812!10154-103A1;0.467429!10209-103G2;0.290641!10061-101H7;0.498443!10027-101D9;0.196156!10043-101F7;0.568971!10783-110G9;0.211325!10028-101E1;0.345099!10060-101H6;0.281225!10203-103F5;0.260871!10059-101H5;0.406759!10047-101G2;0.568713!10029-101E2;0.457742!10058-101H4;0.590529!10418-106C4;0.37561!10492-107B6;0.988065!10694-109G1;0.592722!10797-110I5;0.454186!10057-101H3;0.495653!10100-102D1;0.546718!10055-101H1;0.583904!10204-103F6;0.210011!10191-103E2;0.570237!10563-108A5;0.644642
|name=motif_TGGAGN
|name=motif_TGGAGN
|tomtom_result=ZNF354C#MA0130.1;1;0.00734469;3.49607;1;5;TGGAGC;GTGGAT;-!kni#MA0451.1;4;0.00819864;3.90255;1;6;TGGAGC;AAACTAGAGCAC;+!HSF1#MA0319.1;1;0.00901814;4.29263;1;6;TGGAGC;ATGGAACA;+!brk#MA0213.1;1;0.011338;5.39687;1;6;TGGAGC;CTGGCGCC;+!E2F1#MA0024.1;2;0.0121977;5.80611;1;6;TGGAGC;TTTGGCGC;+!Pax5#MA0014.1;7;0.0202778;9.65223;1;6;TGGAGC;GGAGCACTGAAGCGTAACCG;+
}}
}}

Latest revision as of 13:12, 7 September 2012

Full Name: motif_TGGAGN

Motif matrix
POACGT
01000296
02002960
03002960
04296000
05002960
06029600

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ZNF354C#MA0130.110.007344693.4960715TGGAGCGTGGAT-
kni#MA0451.140.008198643.9025516TGGAGCAAACTAGAGCAC+
HSF1#MA0319.110.009018144.2926316TGGAGCATGGAACA+
brk#MA0213.110.0113385.3968716TGGAGCCTGGCGCC+
E2F1#MA0024.120.01219775.8061116TGGAGCTTTGGCGC+
Pax5#MA0014.170.02027789.6522316TGGAGCGGAGCACTGAAGCGTAACCG+
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