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MacroAPE 1083:CNhs12192 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.9565135876315;92.50254295528909;39.4993285925009;28.152698200293383!2;1.620948896357297;87.32593600254226;0.207196503663197;72.95700193315...")
 
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8B1;0.49444!13230-141I8;0.0332922!13231-141I9;0.882774!10696-109G3;0.61103!10493-107B7;0.350826!10494-107B8;0.858641!10850-111F4;0.619316!10851-111F5;0.0813569!10852-111F6;0.386692!10853-111F7;0.365494!10854-111F8;0.105542!10855-111F9;0.100367!10856-111G1;0.150338!10847-111F1;0.622825!10846-111E9;0.768603!10848-111F2;0.81331!10845-111E8;0.554592!10857-111G2;0.961266!10858-111G3;0.0873948!10156-103A3;0.105529!11901-125F2;0.104535!11902-125F3;0.186576!11903-125F4;0.310997!10689-109F5;0.472949!10648-109A9;0.00918497!10784-110H1;0.0295031!10744-110C6;0.215467!10772-110F7;0.0762177!10474-106I6;0.265239!10600-108E6;0.192869!10684-109E9;0.649295!12226-129F3;0.00123378!12227-129F4;0.471922!10508-107D4;0.838408!10539-107G8;0.0460705!10607-108F4;0.0905434!10555-107I6;0.0708268!10774-110F9;0.0342909!10637-108I7;0.0503!10663-109C6;0.134956!10728-110A8;0.113673!10729-110A9;0.307486!10430-106D7;0.240171!10730-110B1;0.138157!10813-111B3;0.0467376!10812-111B2;0.721763!10037-101F1;0.7093!10172-103C1;0.180316!10163-103B1;0.282433!10076-102A4;0.0937984!10073-102A1;0.163477!10036-101E9;0.382999!10195-103E6;0.201842!10277-104E7;0.134059!10434-106E2;0.0852905!10550-107I1;0.43434!10545-107H5;0.12241!10544-107H4;0.105242!10704-109H2;0.265897!10510-107D6;0.438634!10558-107I9;0.579702!10020-101D2;0.04801!10732-110B3;0.0224295!10049-101G4;0.0231469!10698-109G5;0.221148!10437-106E5;0.0222636!10417-106C3;0.549173!10035-101E8;0.820567!10171-103B9;0.158374!10157-103A4;0.204216!10034-101E7;0.10848!10072-101I9;0.174413!10199-103F1;0.389338!10200-103F2;0.0563059!10697-109G4;0.0539372!10723-110A3;0.195163!10179-103C8;0.479912!10160-103A7;0.387682!10180-103C9;0.476279!10162-103A9;0.4686!10021-101D3;0.435908!10840-111E3;0.0211852!10706-109H4;0.138666!10033-101E6;0.94265!10032-101E5;0.244012!10490-107B4;0.195816!10439-106E7;0.498868!10022-101D4;0.851371!10176-103C5;0.0299557!10469-106I1;0.172614!10067-101I4;0.469553!10411-106B6;0.0497095!10471-106I3;0.0780575!10030-101E3;0.78712!10475-106I7;0.0553178!10787-110H4;0.0227735!10477-106I9;0.0490402!10695-109G2;0.398365!11771-123I7;0.126102!11772-123I8;0.6163!11773-123I9;0.426639!10093-102C3;0.196902!10442-106F1;0.0268954!10442-106F1;0.0365538!10201-103F3;0.061996!10639-108I9;0.0963219!11843-124H7;0.7462!11841-124H5;0.128564!10693-109F9;0.0608187!10436-106E4;0.750338!10483-107A6;0.189732!10282-104F3;0.614316!10023-101D5;0.929919!10066-101I3;0.293436!10065-101I2;0.425633!10800-110I8;0.12763!10610-108F7;0.325812!10841-111E4;0.0248097!10541-107H1;0.100071!10842-111E5;0.472573!10562-108A4;0.0494084!10024-101D6;0.173187!10064-101I1;0.0165228!10609-108F6;0.0325858!10048-101G3;0.00686679!10781-110G7;0.045508!10181-103D1;0.366863!10159-103A6;0.123292!10056-101H2;0.07886!10737-110B8;0.194764!10025-101D7;0.461967!10044-101F8;0.00260125!10424-106D1;0.00645048!10463-106H4;0.0741427!10616-108G4;0.612635!10486-107A9;0.137978!10062-101H8;0.0537179!10202-103F4;0.0234311!10158-103A5;0.0248655!10441-106E9;0.0535145!10031-101E4;0.18376!10063-101H9;0.171844!10063-101H9;0.320477!11763-123H8;0.0556384!11765-123I1;0.848709!11768-123I4;0.545247!10807-111A6;0.744546!10790-110H7;0.895025!10798-110I6;0.241062!10786-110H3;0.25803!10591-108D6;0.823478!10593-108D8;0.992719!10590-108D5;0.800019!10026-101D8;0.353057!10096-102C6;0.450777!10168-103B6;0.249349!10154-103A1;0.187926!10209-103G2;0.111557!10061-101H7;0.100258!10027-101D9;0.120133!10043-101F7;0.587696!10783-110G9;0.506235!10028-101E1;0.683127!10060-101H6;0.000923522!10203-103F5;0.0257298!10059-101H5;0.101245!10047-101G2;0.166276!10029-101E2;0.0146878!10058-101H4;0.0113578!10418-106C4;0.0942833!10492-107B6;0.262284!10694-109G1;0.115565!10797-110I5;0.715275!10057-101H3;0.042196!10100-102D1;0.0624887!10055-101H1;0.0152706!10204-103F6;0.0215963!10191-103E2;0.000473097!10563-108A5;0.00890691
|name=CNhs12192_bu_f0
|name=CNhs12192_bu_f0
|tomtom_result=SPIB#MA0081.1;-4;0.00149834;0.713208;0.982434;7;CCCCCTCCTCTC;TTCCTCT;-!Klf4#MA0039.1;-2;0.00206394;0.982434;0.982434;10;CCCCCTCCTCTC;CCTTCCTTTA;-!SP1#MA0079.2;-1;0.004089;1.94636;1;10;CCCCCTCCTCTC;CCCCGCCCCC;+!Trl#MA0205.1;-4;0.00629933;2.99848;1;8;CCCCCTCCTCTC;TTGCTCTCTC;+!TEAD1#MA0090.1;0;0.00839508;3.99606;1;12;CCCCCTCCTCTC;CACATTCCTCCG;+!YML081W#MA0431.1;-3;0.0104434;4.97107;1;9;CCCCCTCCTCTC;ACCCCGCAC;+!Gata1#MA0035.2;-2;0.0119433;5.68503;1;10;CCCCCTCCTCTC;TTCTTATCTGT;-!RME1#MA0370.1;-4;0.0123042;5.85678;1;8;CCCCCTCCTCTC;TTCCTTTGGA;-!YGR067C#MA0425.1;0;0.0127296;6.0593;1;12;CCCCCTCCTCTC;ACCCCACTTTTTTG;+!MZF1_5-13#MA0057.1;-1;0.015734;7.48939;1;10;CCCCCTCCTCTC;TTCCCCCTAC;-!CHA4#MA0283.1;-3;0.0179018;8.52126;1;8;CCCCCTCCTCTC;TCTCCGCC;-!ELF5#MA0136.1;-1;0.0201354;9.58445;1;9;CCCCCTCCTCTC;TACTTCCTT;+
}}
}}

Latest revision as of 13:48, 7 September 2012

Full Name: CNhs12192_bu_f0

Motif matrix
POACGT
11.956513587631592.5025429552890939.499328592500928.152698200293383
21.62094889635729787.325936002542260.20719650366319772.9570019331521
33.419320962905138799.6990238075795538.4734885638404320.519250001389768
411.43586618829519974.5708858158002131.56931872156692344.535012610052554
54.87874588336457595.860255520980163.037779336261818458.334302595108355
60.022.9728546555026050.37309822879753707138.76513045141473
70.0158.553461882652580.03.557621453062275
81.9154234359079882159.514814838064070.00.680845061742814
914.6809028488061361.86406465941277340.0145.566115827496
100.0151.126044389694210.296059111947859810.688979834072763
113.94844410307841425.4275201089893732.8850301578068299.85008896584027
123.24162758478905593.9418624637903955.826985784859579.10060750227582

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPIB#MA0081.1-40.001498340.7132080.9824347CCCCCTCCTCTCTTCCTCT-
Klf4#MA0039.1-20.002063940.9824340.98243410CCCCCTCCTCTCCCTTCCTTTA-
SP1#MA0079.2-10.0040891.94636110CCCCCTCCTCTCCCCCGCCCCC+
Trl#MA0205.1-40.006299332.9984818CCCCCTCCTCTCTTGCTCTCTC+
TEAD1#MA0090.100.008395083.99606112CCCCCTCCTCTCCACATTCCTCCG+
YML081W#MA0431.1-30.01044344.9710719CCCCCTCCTCTCACCCCGCAC+
Gata1#MA0035.2-20.01194335.68503110CCCCCTCCTCTCTTCTTATCTGT-
RME1#MA0370.1-40.01230425.8567818CCCCCTCCTCTCTTCCTTTGGA-
YGR067C#MA0425.100.01272966.0593112CCCCCTCCTCTCACCCCACTTTTTTG+
MZF1_5-13#MA0057.1-10.0157347.48939110CCCCCTCCTCTCTTCCCCCTAC-
CHA4#MA0283.1-30.01790188.5212618CCCCCTCCTCTCTCTCCGCC-
ELF5#MA0136.1-10.02013549.5844519CCCCCTCCTCTCTACTTCCTT+
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