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MacroAPE 1083:TTCCKGTCYG,motif829: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;26.397;3.771;105.588;283.244!2;10.475;106.845;5.866;295.814!3;25.14;214.109;112.711;67.04!4;43.157;256.428;112.292;7.123!5;64.107;95.951;158...")
 
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1916!10464-106H5;0.459415!10827-111C8;0.380916!10789-110H6;0.530452!10828-111C9;0.0546335!10788-110H5;0.0515229!10792-110H9;0.0593332!10765-110E9;0.0457314!10829-111D1;0.0241463!10830-111D2;0.0542013!10831-111D3;0.0758246!10832-111D4;0.174033!10833-111D5;0.093483!10764-110E8;0.0592205!10770-110F5;0.126054!10399-106A3;0.26418!10400-106A4;0.0535354!10405-106A9;0.045277!10834-111D6;0.0536955!10835-111D7;0.13259!10836-111D8;0.290028!10837-111D9;0.0265623!10699-109G6;0.0392578!10802-111A1;0.223378!10796-110I4;0.000425466!10010-101C1;0.2377!10810-111A9;0.143337!10421-106C7;0.116245!10708-109H6;0.0222762!12235-129G3;0.376818!12236-129G4;0.406647!12237-129G5;0.433416!10167-103B5;0.583889!10151-102I7;0.00329777!10428-106D5;0.00868356!10795-110I3;0.462325!10805-111A4;0.0962123!10052-101G7;0.815116!10189-103D9;0.0623116!10589-108D4;0.534587!10425-106D2;0.978529!10427-106D4;0.582711!10702-109G9;0.283963!10432-106D9;0.883886!10496-107C1;0.284183!10718-109I7;0.247097!10011-101C2;0.0193028!10053-101G8;0.05005!10686-109F2;0.399154!10084-102B3;0.0893882!10012-101C3;0.00518394!10085-102B4;0.0046053!10482-107A5;0.0119309!10419-106C5;0.270013!10080-102A8;0.236014!10760-110E4;0.0152591!10709-109H7;0.630558!10710-109H8;0.124246!10703-109H1;0.685085!10719-109I8;0.266142!10642-109A3;0.860486!10177-103C6;0.534531!10164-103B2;0.000946863!10173-103C2;0.00257796!10166-103B4;0.00623267!10083-102B2;0.0142498!10188-103D8;0.00176041!10552-107I3;0.00248153!10553-107I4;0.277992!10013-101C4;0.810245!10536-107G5;0.150242!10618-108G6;0.584162!10423-106C9;0.450434!10785-110H2;0.358547!12238-129G6;0.971292!12239-129G7;0.12222!12240-129G8;0.971352!10416-106C2;0.909114!10801-110I9;0.142754!10766-110F1;0.0244516!10824-111C5;0.00748345!10825-111C6;0.104748!10826-111C7;0.122399!10454-106G4;0.157637!10409-106B4;0.066269!10638-108I8;0.111213!10636-108I6;0.17355!10513-107D9;0.675314!10420-106C6;0.685963!10082-102B1;0.462159!10014-101C5;0.217459!10070-101I7;0.0598069!10452-106G2;0.0571372!10453-106G3;0.44772!10449-106F8;0.427752!10042-101F6;0.418572!10069-101I6;0.0134254!10193-103E4;0.107061!10631-108I1;0.00257328!10438-106E6;0.0640448!10488-107B2;0.713926!10196-103E7;0.156759!10071-101I8;0.0142088!10071-101I8;0.0814023!10041-101F5;0.0177783!10451-106G1;0.276494!10450-106F9;0.658122!10604-108F1;0.884693!10605-108F2;0.316678!10606-108F3;0.146245!10603-108E9;0.172263!10497-107C2;0.131909!10448-106F7;0.11591!10643-109A4;0.000468369!10426-106D3;0.214311!10431-106D8;0.968502!10197-103E8;0.488518!10443-106F2;0.037318!10815-111B5;0.434188!10816-111B6;0.82919!10817-111B7;0.933069!10015-101C6;0.77436!10410-106B5;0.0635203!10054-101G9;0.206693!10758-110E2;0.0262973!10711-109H9;0.026647!10040-101F4;0.0806843!10470-106I2;0.00759003!10415-106C1;0.816833!10198-103E9;0.179865!10614-108G2;0.0877824!10612-108F9;0.272621!10549-107H9;0.381559!10615-108G3;0.104086!10487-107B1;0.561268!10433-106E1;0.115138!10688-109F4;0.211567!10444-106F3;0.961961!10444-106F3;0.0926628!10485-107A8;0.168934!10413-106B8;0.626008!10175-103C4;0.745025!10161-103A8;0.00297729!12131-128D7;0.0178477!10624-108H3;0.570077!10712-109I1;0.759197!10205-103F7;0.217192!10206-103F8;0.06127!10207-103F9;0.0666698!10050-101G5;0.37749!10051-101G6;0.0893452!10016-101C7;0.195174!10046-101G1;0.143221!10778-110G4;0.119251!10633-108I3;0.947264!10818-111B8;0.682353!10819-111B9;0.945704!10820-111C1;0.901659!10484-107A7;0.925827!10808-111A7;0.852595!10169-103B7;0.238348!10153-102I9;0.00220163!13425-144D5;0.0125857!13433-144E4;0.195524!13437-144E8;0.122475!11904-125F5;0.172454!11905-125F6;0.157024!10039-101F3;0.334391!10791-110H8;0.00756113!10017-101C8;0.42702!10045-101F9;0.157535!10509-107D5;0.0391206!10839-111E2;0.427794!10692-109F8;0.914569!10079-102A7;0.981675!10078-102A6;0.125332!10721-110A1;0.289738!10569-108B2;0.131923!10570-108B3;0.763585!10571-108B4;0.990241!10647-109A8;0.626823!10752-110D5;0.349053!10782-110G8;0.2669!10726-110A6;0.987008!10018-101C9;0.886998!10086-102B5;0.802238!10182-103D2;0.180736!10165-103B3;0.00561721!10499-107C4;0.00868592!10408-106B3;0.656424!10019-101D1;0.117993!10068-101I5;0.044024!10075-102A3;0.12401!10077-102A5;0.181354!10727-110A7;0.767842!10775-110G1;0.0500178!10412-106B7;0.0321359!12231-129F8;0.404241!12232-129F9;0.285234!12233-129G1;0.308661!12234-129G2;0.419737!10414-106B9;0.476904!10170-103B8;0.604051!10183-103D3;0.00202951!10150-102I6;0.00375855!10174-103C3;0.00962734!10155-103A2;0.0184183!10038-101F2;0.0211766!10838-111E1;0.0068212!10759-110E3;0.273967!10514-107E1;0.160895!10465-106H6;0.668441!10691-109F7;0.665358!10843-111E6;0.76478!10844-111E7;0.598235!11747-123G1;0.375514!11748-123G2;0.997134!11749-123G3;0.483933!11750-123G4;0.641243!11751-123G5;0.667729!11840-124H4;0.687725!11752-123G6;0.511636!11753-123G7;0.96718!11754-123G8;0.326064!11755-123G9;0.905433!11756-123H1;0.0737217!11833-124G6;0.414055!11760-123H5;0.22335!11836-124G9;0.821792!11758-123H3;0.439306!11835-124G8;0.780847!11762-123H7;0.762904!11838-124H2;0.922605!11757-123H2;0.433768!11759-123H4;0.988185!11761-123H6;0.421385!11842-124H6;0.462032!11837-124H1;0.947103!10568-108B1;0.599435!13230-141I8;0.444866!13231-141I9;0.545387!10696-109G3;0.351503!10493-107B7;0.455333!10494-107B8;0.31983!10850-111F4;0.805802!10851-111F5;0.202718!10852-111F6;0.657312!10853-111F7;0.195208!10854-111F8;0.594602!10855-111F9;0.763339!10856-111G1;0.971295!10847-111F1;0.76682!10846-111E9;0.88234!10848-111F2;0.588279!10845-111E8;0.385918!10857-111G2;0.268776!10858-111G3;0.57493!10156-103A3;0.777387!11901-125F2;0.0143184!11902-125F3;0.288189!11903-125F4;0.199352!10689-109F5;0.143536!10648-109A9;0.650392!10784-110H1;0.987943!10744-110C6;0.151114!10772-110F7;0.122182!10474-106I6;0.305108!10600-108E6;0.00878102!10684-109E9;0.411049!12226-129F3;0.182439!12227-129F4;0.183427!10508-107D4;0.458507!10539-107G8;0.0274965!10607-108F4;0.646442!10555-107I6;0.867598!10774-110F9;0.290542!10637-108I7;0.570201!10663-109C6;0.679041!10728-110A8;0.418037!10729-110A9;0.970091!10430-106D7;0.512407!10730-110B1;0.268592!10813-111B3;0.0764985!10812-111B2;0.521029!10037-101F1;0.821209!10172-103C1;0.00591025!10163-103B1;0.00566741!10076-102A4;0.0126677!10073-102A1;0.00172167!10036-101E9;0.0312427!10195-103E6;0.00346571!10277-104E7;0.00614071!10434-106E2;0.00739462!10550-107I1;0.305998!10545-107H5;0.684708!10544-107H4;0.187513!10704-109H2;0.378344!10510-107D6;0.0652243!10558-107I9;0.746579!10020-101D2;0.64124!10732-110B3;0.0393237!10049-101G4;0.435146!10698-109G5;0.497072!10437-106E5;0.220781!10417-106C3;0.552113!10035-101E8;0.161612!10171-103B9;0.00588735!10157-103A4;0.00462582!10034-101E7;0.00935184!10072-101I9;0.0045758!10199-103F1;0.0217006!10200-103F2;0.705994!10697-109G4;0.104123!10723-110A3;0.72545!10179-103C8;0.435542!10160-103A7;0.00352472!10180-103C9;0.0232003!10162-103A9;0.00551676!10021-101D3;0.0141524!10840-111E3;0.153887!10706-109H4;0.348015!10033-101E6;0.0319479!10032-101E5;0.00382195!10490-107B4;0.00323163!10439-106E7;0.871229!10022-101D4;0.243817!10176-103C5;0.0364626!10469-106I1;0.000552309!10067-101I4;0.292344!10411-106B6;0.021275!10471-106I3;0.149773!10030-101E3;0.518857!10475-106I7;0.0571353!10787-110H4;0.637673!10477-106I9;0.554835!10695-109G2;0.521444!11771-123I7;0.146481!11772-123I8;0.0799451!11773-123I9;0.336782!10093-102C3;0.743251!10442-106F1;0.356854!10442-106F1;0.979905!10201-103F3;0.847702!10639-108I9;0.0685684!11843-124H7;0.559857!11841-124H5;0.726845!10693-109F9;0.518381!10436-106E4;0.942199!10483-107A6;0.164744!10282-104F3;0.187486!10023-101D5;0.84165!10066-101I3;0.271697!10065-101I2;0.217532!10800-110I8;0.153158!10610-108F7;0.119503!10841-111E4;0.618755!10541-107H1;0.49155!10842-111E5;0.370459!10562-108A4;0.267501!10024-101D6;0.114105!10064-101I1;0.233042!10609-108F6;0.235961!10048-101G3;0.536775!10781-110G7;0.0730574!10181-103D1;0.880753!10159-103A6;0.011232!10056-101H2;0.0489881!10737-110B8;0.00531924!10025-101D7;0.645357!10044-101F8;0.689485!10424-106D1;0.727604!10463-106H4;0.0555239!10616-108G4;0.295085!10486-107A9;0.0668891!10062-101H8;0.00964627!10202-103F4;0.144977!10158-103A5;0.485411!10441-106E9;0.0400403!10031-101E4;0.874507!10063-101H9;0.00349608!10063-101H9;0.0233036!11763-123H8;0.0764926!11765-123I1;0.606592!11768-123I4;0.409988!10807-111A6;0.648824!10790-110H7;0.657484!10798-110I6;0.911658!10786-110H3;0.421394!10591-108D6;0.688477!10593-108D8;0.970406!10590-108D5;0.520119!10026-101D8;0.845246!10096-102C6;0.000829838!10168-103B6;0.00445895!10154-103A1;0.00978123!10209-103G2;0.0216825!10061-101H7;0.104968!10027-101D9;0.0607157!10043-101F7;0.829839!10783-110G9;0.487567!10028-101E1;0.152177!10060-101H6;0.0271196!10203-103F5;0.0185809!10059-101H5;0.151606!10047-101G2;0.160788!10029-101E2;0.511592!10058-101H4;0.110429!10418-106C4;0.079764!10492-107B6;0.339948!10694-109G1;0.622022!10797-110I5;0.537586!10057-101H3;0.398359!10100-102D1;0.0255485!10055-101H1;0.261024!10204-103F6;0.0949965!10191-103E2;0.0982559!10563-108A5;0.236667
|name=TTCCKGTCYG,motif829,CNhs13475,T:419.0(8.02%),B:3582.7(4.51%),P:1e-27
|name=TTCCKGTCYG,motif829,CNhs13475,T:419.0(8.02%),B:3582.7(4.51%),P:1e-27
|tomtom_result=SPIB#MA0081.1;0;0.00034325;0.163387;0.172356;7;TTCCGGTCTG;TTCCTCT;-!ELK1#MA0028.1;1;0.000363721;0.173131;0.172356;9;TTCCGGTCTG;CTTCCGGCTC;-!id1#MA0120.1;2;0.00137877;0.656296;0.351363;10;TTCCGGTCTG;TTTTCCTTTTCG;+!HAP4#MA0315.1;-1;0.00148295;0.705886;0.351363;9;TTCCGGTCTG;TCGCCTCTGATTGGT;-!Trl#MA0205.1;0;0.00253838;1.20827;0.415124;10;TTCCGGTCTG;TTGCTCTCTC;+!GABPA#MA0062.1;3;0.00288154;1.37161;0.415124;7;TTCCGGTCTG;CTCTTCCGGT;-!HAP5#MA0316.1;-1;0.00306611;1.45947;0.415124;9;TTCCGGTCTG;TGGGATCTGATTGGT;+!ELK4#MA0076.1;2;0.00374188;1.78114;0.443291;7;TTCCGGTCTG;ACTTCCGGT;-!YBR239C#MA0420.1;1;0.00450288;2.14337;0.474172;7;TTCCGGTCTG;GTTCCGGT;-!HMG-I/Y#MA0045.1;3;0.00774989;3.68895;0.684594;10;TTCCGGTCTG;GTTTTTCCATTTGTTG;-!Eip74EF#MA0026.1;1;0.00794579;3.7822;0.684594;6;TTCCGGTCTG;CTTCCGG;-!SPI1#MA0080.1;1;0.00991115;4.71771;0.782765;5;TTCCGGTCTG;CTTCCG;-!CAT8#MA0280.1;0;0.0125613;5.97917;0.915755;6;TTCCGGTCTG;TTCCGG;-!ASG1#MA0275.1;0;0.0158002;7.52089;0.995524;6;TTCCGGTCTG;TTCCGG;-!LYS14#MA0325.1;2;0.0191466;9.11377;0.995524;6;TTCCGGTCTG;AATTCCGG;-
}}
}}

Latest revision as of 14:29, 7 September 2012

Full Name: TTCCKGTCYG,motif829,CNhs13475,T:419.0(8.02%),B:3582.7(4.51%),P:1e-27

Motif matrix
POACGT
126.3973.771105.588283.244
210.475106.8455.866295.814
325.14214.109112.71167.04
443.157256.428112.2927.123
564.10795.951158.801100.141
61.257125.7227.09864.945
74.60974.58218.017321.792
87.123214.947110.61686.314
954.889157.1257.542199.025
108.799126.957252.23831.006

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPIB#MA0081.100.000343250.1633870.1723567TTCCGGTCTGTTCCTCT-
ELK1#MA0028.110.0003637210.1731310.1723569TTCCGGTCTGCTTCCGGCTC-
id1#MA0120.120.001378770.6562960.35136310TTCCGGTCTGTTTTCCTTTTCG+
HAP4#MA0315.1-10.001482950.7058860.3513639TTCCGGTCTGTCGCCTCTGATTGGT-
Trl#MA0205.100.002538381.208270.41512410TTCCGGTCTGTTGCTCTCTC+
GABPA#MA0062.130.002881541.371610.4151247TTCCGGTCTGCTCTTCCGGT-
HAP5#MA0316.1-10.003066111.459470.4151249TTCCGGTCTGTGGGATCTGATTGGT+
ELK4#MA0076.120.003741881.781140.4432917TTCCGGTCTGACTTCCGGT-
YBR239C#MA0420.110.004502882.143370.4741727TTCCGGTCTGGTTCCGGT-
HMG-I/Y#MA0045.130.007749893.688950.68459410TTCCGGTCTGGTTTTTCCATTTGTTG-
Eip74EF#MA0026.110.007945793.78220.6845946TTCCGGTCTGCTTCCGG-
SPI1#MA0080.110.009911154.717710.7827655TTCCGGTCTGCTTCCG-
CAT8#MA0280.100.01256135.979170.9157556TTCCGGTCTGTTCCGG-
ASG1#MA0275.100.01580027.520890.9955246TTCCGGTCTGTTCCGG-
LYS14#MA0325.120.01914669.113770.9955246TTCCGGTCTGAATTCCGG-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:TTCCKGTCYG,motif829&oldid=2134379"