FFCP PHASE1:Mm9::chr1:66486342..66486351,+: Difference between revisions
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|id=chr1:66486342..66486351,+ | |id=chr1:66486342..66486351,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.26e-40!23;CL:0000337!7.26e-40!23;CL:0000540!2.95e-26!33;CL:0000047!2.95e-26!33;CL:0000031!2.95e-26!33;CL:0000404!2.95e-26!33;CL:0000393!1.91e-21!39;CL:0000211!1.91e-21!39;CL:0002319!5.51e-19!43;CL:0000221!1.93e-18!44;CL:0000133!1.93e-18!44;CL:0000055!1.24e-15!50;CL:0002609!1.40e-14!6;CL:0002321!8.88e-10!70;CL:0000220!8.88e-10!70;CL:0002610!6.65e-09!3;CL:0002612!1.40e-08!3;CL:0002613!2.08e-08!3;CL:0002608!4.75e-08!3 | |ontology_enrichment_celltype=CL:0000117!7.26e-40!23;CL:0000337!7.26e-40!23;CL:0000540!2.95e-26!33;CL:0000047!2.95e-26!33;CL:0000031!2.95e-26!33;CL:0000404!2.95e-26!33;CL:0000393!1.91e-21!39;CL:0000211!1.91e-21!39;CL:0002319!5.51e-19!43;CL:0000221!1.93e-18!44;CL:0000133!1.93e-18!44;CL:0000055!1.24e-15!50;CL:0002609!1.40e-14!6;CL:0002321!8.88e-10!70;CL:0000220!8.88e-10!70;CL:0002610!6.65e-09!3;CL:0002612!1.40e-08!3;CL:0002613!2.08e-08!3;CL:0002608!4.75e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.47e-52,3;CL:0002612,2.99e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.27e-27!34;UBERON:0001017!1.12e-25!73;UBERON:0005743!1.12e-25!73;UBERON:0001049!2.00e-25!52;UBERON:0005068!2.00e-25!52;UBERON:0006241!2.00e-25!52;UBERON:0007135!2.00e-25!52;UBERON:0000073!8.32e-25!75;UBERON:0001016!8.32e-25!75;UBERON:0002616!6.37e-21!49;UBERON:0000955!2.16e-20!50;UBERON:0006238!2.16e-20!50;UBERON:0004121!4.77e-19!102;UBERON:0000924!4.77e-19!102;UBERON:0006601!4.77e-19!102;UBERON:0002346!1.85e-18!71;UBERON:0003075!1.85e-18!71;UBERON:0007284!1.85e-18!71;UBERON:0002791!7.23e-18!29;UBERON:0003528!7.23e-18!29;UBERON:0001893!7.23e-18!29;UBERON:0002780!9.05e-18!39;UBERON:0001890!9.05e-18!39;UBERON:0006240!9.05e-18!39;UBERON:0003080!3.27e-17!40;UBERON:0000033!1.69e-16!63;UBERON:0003056!1.00e-14!49;UBERON:0002240!2.05e-14!6;UBERON:0005174!2.05e-14!6;UBERON:0001137!2.05e-14!6;UBERON:0001948!1.58e-12!5;UBERON:0002315!1.58e-12!5;UBERON:0000369!3.03e-12!5;UBERON:0002435!3.03e-12!5;UBERON:0000204!3.03e-12!5;UBERON:0010082!3.03e-12!5;UBERON:0007811!1.41e-10!86;UBERON:0002420!2.56e-10!8;UBERON:0007245!2.56e-10!8;UBERON:0010009!2.56e-10!8;UBERON:0010011!2.56e-10!8;UBERON:0000454!2.56e-10!8;UBERON:0000956!9.23e-10!21;UBERON:0001869!9.23e-10!21;UBERON:0000203!9.23e-10!21;UBERON:0000153!3.32e-09!94;UBERON:0000025!3.44e-09!114;UBERON:0003076!6.01e-09!12;UBERON:0003057!6.01e-09!12;UBERON:0004684!6.65e-09!3;UBERON:0002275!6.65e-09!3;UBERON:0002257!1.40e-08!3;UBERON:0004111!3.46e-08!122 | |ontology_enrichment_uberon=UBERON:0002020!4.27e-27!34;UBERON:0001017!1.12e-25!73;UBERON:0005743!1.12e-25!73;UBERON:0001049!2.00e-25!52;UBERON:0005068!2.00e-25!52;UBERON:0006241!2.00e-25!52;UBERON:0007135!2.00e-25!52;UBERON:0000073!8.32e-25!75;UBERON:0001016!8.32e-25!75;UBERON:0002616!6.37e-21!49;UBERON:0000955!2.16e-20!50;UBERON:0006238!2.16e-20!50;UBERON:0004121!4.77e-19!102;UBERON:0000924!4.77e-19!102;UBERON:0006601!4.77e-19!102;UBERON:0002346!1.85e-18!71;UBERON:0003075!1.85e-18!71;UBERON:0007284!1.85e-18!71;UBERON:0002791!7.23e-18!29;UBERON:0003528!7.23e-18!29;UBERON:0001893!7.23e-18!29;UBERON:0002780!9.05e-18!39;UBERON:0001890!9.05e-18!39;UBERON:0006240!9.05e-18!39;UBERON:0003080!3.27e-17!40;UBERON:0000033!1.69e-16!63;UBERON:0003056!1.00e-14!49;UBERON:0002240!2.05e-14!6;UBERON:0005174!2.05e-14!6;UBERON:0001137!2.05e-14!6;UBERON:0001948!1.58e-12!5;UBERON:0002315!1.58e-12!5;UBERON:0000369!3.03e-12!5;UBERON:0002435!3.03e-12!5;UBERON:0000204!3.03e-12!5;UBERON:0010082!3.03e-12!5;UBERON:0007811!1.41e-10!86;UBERON:0002420!2.56e-10!8;UBERON:0007245!2.56e-10!8;UBERON:0010009!2.56e-10!8;UBERON:0010011!2.56e-10!8;UBERON:0000454!2.56e-10!8;UBERON:0000956!9.23e-10!21;UBERON:0001869!9.23e-10!21;UBERON:0000203!9.23e-10!21;UBERON:0000153!3.32e-09!94;UBERON:0000025!3.44e-09!114;UBERON:0003076!6.01e-09!12;UBERON:0003057!6.01e-09!12;UBERON:0004684!6.65e-09!3;UBERON:0002275!6.65e-09!3;UBERON:0002257!1.40e-08!3;UBERON:0004111!3.46e-08!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.47e-52,3;UBERON:0002275,2.47e-52,3;UBERON:0002257,2.99e-24,3;UBERON:0001948,5.16e-15,5;UBERON:0002315,5.16e-15,5;UBERON:0002240,1.08e-12,6;UBERON:0005174,1.08e-12,6;UBERON:0001137,1.08e-12,6;UBERON:0000073,1.10e-08,54;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.810035629990144,0.210324961351382,0.285650984403804,0.220868540951614,0.367472397644862,0.287536413054709,0.919218786610021,3.30347642998166,1.27687338085188,2.61131106535614,0.659431438650969,0.731901148819277,0.52091337055676,0,0,0.15279824777681,3.53554302568401,1.42371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.125654352112864,0.521472960576829,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.810035629990144,0.210324961351382,0.285650984403804,0.220868540951614,0.367472397644862,0.287536413054709,0.919218786610021,3.30347642998166,1.27687338085188,2.61131106535614,0.659431438650969,0.731901148819277,0.52091337055676,0,0,0.15279824777681,3.53554302568401,1.42371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.125654352112864,0.521472960576829,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:66486342..66486351,+ | |short_description=p@chr1:66486342..66486351,+ | ||
}} | }} |
Revision as of 13:43, 13 November 2012
Short description: | p@chr1:66486342..66486351, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:66486342..66486351, + |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.47e-52 | 3 |
neuron of the ventral spinal cord | 2.99e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.47e-52 | 3 |
reticular formation | 2.47e-52 | 3 |
ventral horn of spinal cord | 2.99e-24 | 3 |
regional part of spinal cord | 5.16e-15 | 5 |
gray matter of spinal cord | 5.16e-15 | 5 |
spinal cord | 1.08e-12 | 6 |
dorsal region element | 1.08e-12 | 6 |
dorsum | 1.08e-12 | 6 |
regional part of nervous system | 1.10e-08 | 54 |
posterior neural tube | 7.73e-07 | 12 |
chordal neural plate | 7.73e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.