FFCP PHASE1:Mm9::chr3:67267720..67267747,-: Difference between revisions
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|id=chr3:67267720..67267747,- | |id=chr3:67267720..67267747,- | ||
|ontology_enrichment_celltype=CL:0000055!2.22e-13!50;CL:0002319!6.72e-11!43;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39;CL:0000333!1.10e-07!10;CL:0000095!1.10e-07!10;CL:0000243!1.10e-07!10;CL:0000123!1.10e-07!10;CL:0000125!1.10e-07!10;CL:0000030!1.10e-07!10;CL:0000339!1.10e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.22e-13!50;CL:0002319!6.72e-11!43;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39;CL:0000333!1.10e-07!10;CL:0000095!1.10e-07!10;CL:0000243!1.10e-07!10;CL:0000123!1.10e-07!10;CL:0000125!1.10e-07!10;CL:0000030!1.10e-07!10;CL:0000339!1.10e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.67e-11,43;CL:0000221,2.19e-10,44;CL:0000133,2.19e-10,44;CL:0000393,1.70e-08,39;CL:0000211,1.70e-08,39;CL:0000333,1.09e-07,10;CL:0000095,1.09e-07,10;CL:0000243,1.09e-07,10;CL:0000123,1.09e-07,10;CL:0000125,1.09e-07,10;CL:0000030,1.09e-07,10;CL:0000339,1.09e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.91e-20!75;UBERON:0001016!3.91e-20!75;UBERON:0001017!7.33e-19!73;UBERON:0005743!7.33e-19!73;UBERON:0004121!6.45e-13!102;UBERON:0000924!6.45e-13!102;UBERON:0006601!6.45e-13!102;UBERON:0001049!3.89e-12!52;UBERON:0005068!3.89e-12!52;UBERON:0006241!3.89e-12!52;UBERON:0007135!3.89e-12!52;UBERON:0000955!1.41e-10!50;UBERON:0006238!1.41e-10!50;UBERON:0002616!3.01e-10!49;UBERON:0002346!4.00e-08!71;UBERON:0003075!4.00e-08!71;UBERON:0007284!4.00e-08!71;UBERON:0002020!6.94e-08!34;UBERON:0003076!1.61e-07!12;UBERON:0003057!1.61e-07!12;UBERON:0000025!3.43e-07!114;UBERON:0003080!9.86e-07!40 | |ontology_enrichment_uberon=UBERON:0000073!3.91e-20!75;UBERON:0001016!3.91e-20!75;UBERON:0001017!7.33e-19!73;UBERON:0005743!7.33e-19!73;UBERON:0004121!6.45e-13!102;UBERON:0000924!6.45e-13!102;UBERON:0006601!6.45e-13!102;UBERON:0001049!3.89e-12!52;UBERON:0005068!3.89e-12!52;UBERON:0006241!3.89e-12!52;UBERON:0007135!3.89e-12!52;UBERON:0000955!1.41e-10!50;UBERON:0006238!1.41e-10!50;UBERON:0002616!3.01e-10!49;UBERON:0002346!4.00e-08!71;UBERON:0003075!4.00e-08!71;UBERON:0007284!4.00e-08!71;UBERON:0002020!6.94e-08!34;UBERON:0003076!1.61e-07!12;UBERON:0003057!1.61e-07!12;UBERON:0000025!3.43e-07!114;UBERON:0003080!9.86e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.45e-20,75;UBERON:0001017,8.34e-19,73;UBERON:0004121,5.01e-14,95;UBERON:0000924,5.01e-14,95;UBERON:0006601,5.01e-14,95;UBERON:0000073,5.94e-13,54;UBERON:0001049,4.42e-12,52;UBERON:0005068,4.42e-12,52;UBERON:0006241,4.42e-12,52;UBERON:0007135,4.42e-12,52;UBERON:0000955,3.33e-09,47;UBERON:0006238,3.33e-09,47;UBERON:0002346,3.41e-09,64;UBERON:0003075,3.41e-09,64;UBERON:0007284,3.41e-09,64;UBERON:0002616,6.89e-09,46;UBERON:0010314,2.05e-08,92;UBERON:0010371,4.92e-08,73;UBERON:0002020,7.87e-08,34;UBERON:0003076,1.59e-07,12;UBERON:0003057,1.59e-07,12;UBERON:0000025,3.89e-07,114 | |||
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| ||
|short_description=p2@Lxn | |short_description=p2@Lxn | ||
}} | }} |
Revision as of 22:04, 13 November 2012
Short description: | p2@Lxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2380 |
Association with transcript: | -16bp_to_ENSMUST00000160202_5end |
EntrezGene: | Lxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.67e-11 | 43 |
ectodermal cell | 2.19e-10 | 44 |
neurectodermal cell | 2.19e-10 | 44 |
electrically responsive cell | 1.70e-08 | 39 |
electrically active cell | 1.70e-08 | 39 |
migratory neural crest cell | 1.09e-07 | 10 |
neuron associated cell | 1.09e-07 | 10 |
glial cell (sensu Vertebrata) | 1.09e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.09e-07 | 10 |
glial cell | 1.09e-07 | 10 |
glioblast | 1.09e-07 | 10 |
glioblast (sensu Vertebrata) | 1.09e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.45e-20 | 75 |
central nervous system | 8.34e-19 | 73 |
ectoderm-derived structure | 5.01e-14 | 95 |
ectoderm | 5.01e-14 | 95 |
presumptive ectoderm | 5.01e-14 | 95 |
regional part of nervous system | 5.94e-13 | 54 |
neural tube | 4.42e-12 | 52 |
neural rod | 4.42e-12 | 52 |
future spinal cord | 4.42e-12 | 52 |
neural keel | 4.42e-12 | 52 |
brain | 3.33e-09 | 47 |
future brain | 3.33e-09 | 47 |
neurectoderm | 3.41e-09 | 64 |
neural plate | 3.41e-09 | 64 |
presumptive neural plate | 3.41e-09 | 64 |
regional part of brain | 6.89e-09 | 46 |
structure with developmental contribution from neural crest | 2.05e-08 | 92 |
ecto-epithelium | 4.92e-08 | 73 |
gray matter | 7.87e-08 | 34 |
posterior neural tube | 1.59e-07 | 12 |
chordal neural plate | 1.59e-07 | 12 |
tube | 3.89e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.