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FFCP PHASE1:Mm9::chr15:99055010..99055049,+: Difference between revisions

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|id=chr15:99055010..99055049,+
|id=chr15:99055010..99055049,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,1.08e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003080!8.43e-15!40;UBERON:0002780!1.62e-14!39;UBERON:0001890!1.62e-14!39;UBERON:0006240!1.62e-14!39;UBERON:0000955!7.21e-14!50;UBERON:0006238!7.21e-14!50;UBERON:0002616!3.33e-13!49;UBERON:0000956!2.51e-11!21;UBERON:0001869!2.51e-11!21;UBERON:0000203!2.51e-11!21;UBERON:0002791!4.28e-11!29;UBERON:0003528!4.28e-11!29;UBERON:0001893!4.28e-11!29;UBERON:0001049!1.24e-10!52;UBERON:0005068!1.24e-10!52;UBERON:0006241!1.24e-10!52;UBERON:0007135!1.24e-10!52;UBERON:0003056!4.22e-10!49;UBERON:0002619!5.71e-09!17;UBERON:0007811!6.85e-09!86;UBERON:0002020!1.20e-08!34;UBERON:0002021!2.65e-08!10;UBERON:0000411!2.65e-08!10;UBERON:0001950!2.65e-08!10;UBERON:0000033!5.96e-08!63;UBERON:0002346!7.43e-08!71;UBERON:0003075!7.43e-08!71;UBERON:0007284!7.43e-08!71;UBERON:0000153!9.79e-08!94;UBERON:0001017!5.37e-07!73;UBERON:0005743!5.37e-07!73
|ontology_enrichment_uberon=UBERON:0003080!8.43e-15!40;UBERON:0002780!1.62e-14!39;UBERON:0001890!1.62e-14!39;UBERON:0006240!1.62e-14!39;UBERON:0000955!7.21e-14!50;UBERON:0006238!7.21e-14!50;UBERON:0002616!3.33e-13!49;UBERON:0000956!2.51e-11!21;UBERON:0001869!2.51e-11!21;UBERON:0000203!2.51e-11!21;UBERON:0002791!4.28e-11!29;UBERON:0003528!4.28e-11!29;UBERON:0001893!4.28e-11!29;UBERON:0001049!1.24e-10!52;UBERON:0005068!1.24e-10!52;UBERON:0006241!1.24e-10!52;UBERON:0007135!1.24e-10!52;UBERON:0003056!4.22e-10!49;UBERON:0002619!5.71e-09!17;UBERON:0007811!6.85e-09!86;UBERON:0002020!1.20e-08!34;UBERON:0002021!2.65e-08!10;UBERON:0000411!2.65e-08!10;UBERON:0001950!2.65e-08!10;UBERON:0000033!5.96e-08!63;UBERON:0002346!7.43e-08!71;UBERON:0003075!7.43e-08!71;UBERON:0007284!7.43e-08!71;UBERON:0000153!9.79e-08!94;UBERON:0001017!5.37e-07!73;UBERON:0005743!5.37e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.61e-27,39;UBERON:0001890,1.61e-27,39;UBERON:0006240,1.61e-27,39;UBERON:0003080,1.38e-26,40;UBERON:0000955,8.33e-25,47;UBERON:0006238,8.33e-25,47;UBERON:0002616,1.88e-23,46;UBERON:0000956,1.00e-22,21;UBERON:0001869,1.00e-22,21;UBERON:0000203,1.00e-22,21;UBERON:0000073,1.65e-21,54;UBERON:0003528,7.52e-21,29;UBERON:0002791,7.52e-21,29;UBERON:0001893,7.52e-21,29;UBERON:0003056,6.22e-20,49;UBERON:0001049,1.30e-19,52;UBERON:0005068,1.30e-19,52;UBERON:0006241,1.30e-19,52;UBERON:0007135,1.30e-19,52;UBERON:0002619,8.26e-18,17;UBERON:0002020,1.00e-16,34;UBERON:0002021,1.60e-15,10;UBERON:0000411,1.60e-15,10;UBERON:0001950,1.60e-15,10;UBERON:0001017,1.39e-14,73;UBERON:0002346,3.79e-14,64;UBERON:0003075,3.79e-14,64;UBERON:0007284,3.79e-14,64;UBERON:0001016,6.36e-14,75;UBERON:0010371,2.83e-11,73;UBERON:0004121,6.10e-09,95;UBERON:0000924,6.10e-09,95;UBERON:0006601,6.10e-09,95;UBERON:0010314,8.78e-08,92;UBERON:0000025,1.03e-07,114;UBERON:0001894,1.86e-07,10;UBERON:0006222,1.86e-07,10
|phase1_expression=0,0,1.36499771816861,0.30246421130683,0,1.34303417529512,0.934450562382103,0.387369970324729,0,0.234064526321993,0,0,0,0.874204024189974,0,0,0,0,0,0,6.54833334163237,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.646413698057667,0.950117097281869,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,3.94020526772215,2.02508907497536,2.73422449756797,0,0.220868540951614,2.20483438586917,1.34183659425531,1.83843757322004,0,4.97980618532232,1.38245879930619,0.395658863190582,0.640413505216868,0.52091337055676,0,0,3.81995619442025,0.294628585473668,0,0.186399445825301,0.075726193333184,0.151143120213571,1.15945795480671,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.753613202763113,0.823120949949934,0.502666365318702,0,0.289198713839823,0,0.323533699894818,0,0,1.86391761218122,0,1.46612694769419,0,0,0,0,0.898743836428936,53.9850711325979,5.40313714085317,51.6258230971061,45.0059204901382,6.85700547046548,18.9822277789276,0.611036183101898,4.72746488318353,27.2940579108369,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0.527853372491847,0.43839146485515,0.278047249225598,0.696504333044333,0,1.79130840136644,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,26.9171134162083,4.32199371992995,0.330418782983798,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0,0,0,0.398282546508734,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0,0.49095073923223,0.316182685621286,0.147610147979602,0.31399745568275,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0,0,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0.714130922658041,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0.867894351489069,0,0,0,0,0.963303539926752,0.35163505977661,0.327869890753351,0,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0,0,59.4444435380343,1.27746076687442,1.6025904330053,0.977321756121456,7.25868541079156,0,0.242780636154981,1.209294227859,0.565815239267694,1.47650946440386,0.307435147943927,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,1.70219802876894,0.18006109403131,0.258717367565509,1.71469628025274,1.06404140185364,1.78368817602071,2.79733335023606,3.04464949114599,0,0.21183207086382,0.220528398054962,0.32977250588296,0.968786560175433,0.241251699712623,0.119372344003136,0.492422699235184,0,0.18542530201051,0.341741761595705,1.23832120777933,0.370389054739423,0.565105371014073,0.27338845544205,0.686334519619568,0,0,0,0,0.474503990371703,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.269728692769641,0.661227645802687,0,0.518459893167171,0,0,0.897099276263873,1.32366792365678,1.16670713006429,0.387479470433193,0.675824501963113,0.117357238645754,0.651021924219751,0.419437377702843,1.69108884578204,0.288030006257865,1.26404448251271,0.405450430580328,0.821687657318618,0.77952493786677,1.9692936523423,0.79472541912506,0.961563596159751,1.77227432609493,0.807731599585181,0.685861259894999,1.81487133246313,1.36441033035653,0.673482891482306,1.5193997283604,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,2.19781949120718,0.214368379079066,0,50.2629139929189,46.4928488872249,45.8316410751517,40.3854978507666,54.8066015816514,47.5898155355511,41.1763725141402,46.8334051353189,51.2050922152151,39.3497836931383,0.103787347584177,0,0.512200817262403,0.486213434136588,0.419226325255965,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,1.03005658216871,0.640251524048693,0.34461281373368,2.38146845641537,0.927074607558844,0.38581844092741,0.824171801606613,0.735994600671987,0,0.177475806159338,0.953744759789284,1.0174249164263,0.564656282491984,0.676916863133412,0.914639864363863,0.526139422875686,0.135804113845862,0,0.949080144993393,0.492522411877817,0.409231043169689,0.929621047115796,0.578719832943424,2.24829520144151,1.87145286756327,1.07435527024149,0.191288332068843,0,0
|phase1_expression=0,0,1.36499771816861,0.30246421130683,0,1.34303417529512,0.934450562382103,0.387369970324729,0,0.234064526321993,0,0,0,0.874204024189974,0,0,0,0,0,0,6.54833334163237,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.646413698057667,0.950117097281869,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,3.94020526772215,2.02508907497536,2.73422449756797,0,0.220868540951614,2.20483438586917,1.34183659425531,1.83843757322004,0,4.97980618532232,1.38245879930619,0.395658863190582,0.640413505216868,0.52091337055676,0,0,3.81995619442025,0.294628585473668,0,0.186399445825301,0.075726193333184,0.151143120213571,1.15945795480671,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.753613202763113,0.823120949949934,0.502666365318702,0,0.289198713839823,0,0.323533699894818,0,0,1.86391761218122,0,1.46612694769419,0,0,0,0,0.898743836428936,53.9850711325979,5.40313714085317,51.6258230971061,45.0059204901382,6.85700547046548,18.9822277789276,0.611036183101898,4.72746488318353,27.2940579108369,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0.527853372491847,0.43839146485515,0.278047249225598,0.696504333044333,0,1.79130840136644,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,26.9171134162083,4.32199371992995,0.330418782983798,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0,0,0,0.398282546508734,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0,0.49095073923223,0.316182685621286,0.147610147979602,0.31399745568275,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0,0,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0.714130922658041,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0.867894351489069,0,0,0,0,0.963303539926752,0.35163505977661,0.327869890753351,0,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0,0,59.4444435380343,1.27746076687442,1.6025904330053,0.977321756121456,7.25868541079156,0,0.242780636154981,1.209294227859,0.565815239267694,1.47650946440386,0.307435147943927,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,1.70219802876894,0.18006109403131,0.258717367565509,1.71469628025274,1.06404140185364,1.78368817602071,2.79733335023606,3.04464949114599,0,0.21183207086382,0.220528398054962,0.32977250588296,0.968786560175433,0.241251699712623,0.119372344003136,0.492422699235184,0,0.18542530201051,0.341741761595705,1.23832120777933,0.370389054739423,0.565105371014073,0.27338845544205,0.686334519619568,0,0,0,0,0.474503990371703,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.269728692769641,0.661227645802687,0,0.518459893167171,0,0,0.897099276263873,1.32366792365678,1.16670713006429,0.387479470433193,0.675824501963113,0.117357238645754,0.651021924219751,0.419437377702843,1.69108884578204,0.288030006257865,1.26404448251271,0.405450430580328,0.821687657318618,0.77952493786677,1.9692936523423,0.79472541912506,0.961563596159751,1.77227432609493,0.807731599585181,0.685861259894999,1.81487133246313,1.36441033035653,0.673482891482306,1.5193997283604,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,2.19781949120718,0.214368379079066,0,50.2629139929189,46.4928488872249,45.8316410751517,40.3854978507666,54.8066015816514,47.5898155355511,41.1763725141402,46.8334051353189,51.2050922152151,39.3497836931383,0.103787347584177,0,0.512200817262403,0.486213434136588,0.419226325255965,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,1.03005658216871,0.640251524048693,0.34461281373368,2.38146845641537,0.927074607558844,0.38581844092741,0.824171801606613,0.735994600671987,0,0.177475806159338,0.953744759789284,1.0174249164263,0.564656282491984,0.676916863133412,0.914639864363863,0.526139422875686,0.135804113845862,0,0.949080144993393,0.492522411877817,0.409231043169689,0.929621047115796,0.578719832943424,2.24829520144151,1.87145286756327,1.07435527024149,0.191288332068843,0,0
|short_description=p1@Kcnh3
|short_description=p1@Kcnh3
}}
}}

Revision as of 17:27, 14 November 2012

Short description:p1@Kcnh3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnh3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -242bp_to_ENSMUST00000088254_5end
EntrezGene:Kcnh3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnh3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D853.99
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D551.63
cortex, neonate N30.CNhs11107.1392-42F245.01
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B227.29
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E826.92
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I959.44
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A547.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A746.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A851.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex1.08e-076

Uber anatomy
Ontology termp-valuen
regional part of forebrain1.61e-2739
forebrain1.61e-2739
future forebrain1.61e-2739
anterior neural tube1.38e-2640
brain8.33e-2547
future brain8.33e-2547
regional part of brain1.88e-2346
cerebral cortex1.00e-2221
cerebral hemisphere1.00e-2221
pallium1.00e-2221
regional part of nervous system1.65e-2154
brain grey matter7.52e-2129
regional part of telencephalon7.52e-2129
telencephalon7.52e-2129
pre-chordal neural plate6.22e-2049
neural tube1.30e-1952
neural rod1.30e-1952
future spinal cord1.30e-1952
neural keel1.30e-1952
regional part of cerebral cortex8.26e-1817
gray matter1.00e-1634
occipital lobe1.60e-1510
visual cortex1.60e-1510
neocortex1.60e-1510
central nervous system1.39e-1473
neurectoderm3.79e-1464
neural plate3.79e-1464
presumptive neural plate3.79e-1464
nervous system6.36e-1475
ecto-epithelium2.83e-1173
ectoderm-derived structure6.10e-0995
ectoderm6.10e-0995
presumptive ectoderm6.10e-0995
structure with developmental contribution from neural crest8.78e-0892
tube1.03e-07114
diencephalon1.86e-0710
future diencephalon1.86e-0710







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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