FFCP PHASE1:Hg19::chr1:84610044..84610056,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000037!1.60e-28!172;CL:0000566!1.60e-28!172;CL:0000988!5.11e-26!182;CL:0002032!1.22e-25!165;CL:0000837!1.22e-25!165;CL:0000738!1.43e-25!140;CL:0002031!2.31e-23!124;CL:0002087!2.43e-23!119;CL:0000542!4.67e-22!53;CL:0000051!4.67e-22!53;CL:0000838!2.82e-21!52;CL:0000791!4.28e-18!18;CL:0000789!4.28e-18!18;CL:0002420!4.28e-18!18;CL:0002419!4.28e-18!18;CL:0000790!4.28e-18!18;CL:0000084!6.19e-17!25;CL:0000827!6.19e-17!25;CL:0000625!1.11e-11!11;CL:0000763!4.26e-08!112;CL:0000049!4.26e-08!112;CL:0000624!4.26e-07!6 | |ontology_enrichment_celltype=CL:0000037!1.60e-28!172;CL:0000566!1.60e-28!172;CL:0000988!5.11e-26!182;CL:0002032!1.22e-25!165;CL:0000837!1.22e-25!165;CL:0000738!1.43e-25!140;CL:0002031!2.31e-23!124;CL:0002087!2.43e-23!119;CL:0000542!4.67e-22!53;CL:0000051!4.67e-22!53;CL:0000838!2.82e-21!52;CL:0000791!4.28e-18!18;CL:0000789!4.28e-18!18;CL:0002420!4.28e-18!18;CL:0002419!4.28e-18!18;CL:0000790!4.28e-18!18;CL:0000084!6.19e-17!25;CL:0000827!6.19e-17!25;CL:0000625!1.11e-11!11;CL:0000763!4.26e-08!112;CL:0000049!4.26e-08!112;CL:0000624!4.26e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.81e-32;18!CL:0000789;9.81e-32;18!CL:0002419;9.81e-32;18!CL:0000084;9.92e-25;25!CL:0000542;4.62e-18;53!CL:0000625;2.72e-17;11!CL:0000624;2.36e-14;6!CL:0000898;4.34e-08;3!CL:0000623;1.43e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;9.81e-32;18!CL:0000789;9.81e-32;18!CL:0002419;9.81e-32;18!CL:0000084;9.92e-25;25!CL:0000542;4.62e-18;53!CL:0000625;2.72e-17;11!CL:0000624;2.36e-14;6!CL:0000898;4.34e-08;3!CL:0000623;1.43e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.42e-32,18;CL:0000789,8.42e-32,18;CL:0002420,8.42e-32,18;CL:0002419,8.42e-32,18;CL:0000790,8.42e-32,18;CL:0000542,1.10e-30,53;CL:0000051,1.10e-30,53;CL:0000838,3.88e-29,52;CL:0000084,1.04e-24,25;CL:0000827,1.04e-24,25;CL:0000625,2.03e-17,11;CL:0000037,4.21e-15,168;CL:0002032,3.63e-14,161;CL:0000837,3.63e-14,161;CL:0000624,3.71e-14,6;CL:0002087,7.89e-14,115;CL:0000988,8.74e-14,177;CL:0000738,2.43e-13,136;CL:0002031,6.64e-13,120;CL:0000898,3.98e-08,3;CL:0000623,8.87e-08,3;CL:0000825,8.87e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.81e-32;18!CL:0000051;4.62e-18;53 | |ontology_enrichment_development_v019=CL:0000790;9.81e-32;18!CL:0000051;4.62e-18;53 | ||
|ontology_enrichment_disease=DOID:2531!2.57e-07!51;DOID:0060083!2.57e-07!51;DOID:1240!5.01e-07!39 | |ontology_enrichment_disease=DOID:2531!2.57e-07!51;DOID:0060083!2.57e-07!51;DOID:1240!5.01e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.81e-11!112;UBERON:0002390!5.41e-11!102;UBERON:0003061!5.41e-11!102 | |ontology_enrichment_uberon=UBERON:0002193!3.81e-11!112;UBERON:0002390!5.41e-11!102;UBERON:0003061!5.41e-11!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-07;15!UBERON:0000179;2.78e-07;15!UBERON:0000463;2.78e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-07;15!UBERON:0000179;2.78e-07;15!UBERON:0000463;2.78e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,7.18e-12,10;UBERON:0002370,1.02e-10,4;UBERON:0005058,1.02e-10,4;UBERON:0009113,1.02e-10,4;UBERON:0003295,1.02e-10,4;UBERON:0005562,1.02e-10,4;UBERON:0004177,6.29e-09,7;UBERON:0005057,6.29e-09,7;UBERON:0000178,2.88e-07,15;UBERON:0000179,2.88e-07,15;UBERON:0000463,2.88e-07,15;UBERON:0003351,4.03e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0706351847777,0.464448369948228,0,0,0,1.08454080812422,1.70603078984906,1.46800219667424,0,0.401088894940283,0.217010870715852,0.671746422719773,0,0.77272670290256,0,0.377875943688809,0,0.697287110717054,0.411167888021826,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,3.51992488922645,1.63841583378639,1.77901850772711,0.426730222566507,1.20118796110804,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,2.64342657158052,2.80254281490768,0.790152254325231,2.55722701147983,1.17903228824749,1.23360899399706,1.5046784585161,1.30368906653436,1.4203434172042,1.94826728407911,1.55974639639243,3.24066498222321,2.43687284041983,3.24964636518019,0.896639238079726,1.43065282315866,0.657751618414705,2.21080014228679,3.47763702882063,4.89345658434799,4.54819407752512,1.04535523804977,2.15287751125376,1.53288197440768,2.06176467289578,4.80737414837055,4.14135038621326,2.60433381542567,1.90090408889675,2.86092726247768,3.07167866770604,1.24930726552346,2.36777252044017,0.821127996921047,1.81446068902259,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.522389211897802,0.664789802594326,0.476981248610684,0,0.371457501329565,1.39133685156694,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0.66944122552934,0,0.760272105718513,0,1.10298924103761,0,1.07159673940896,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0.141775097242386,0,0,0,0.985326475791887,0.264145302039678,1.86595303986695,0.288239906833923,1.76739406796932,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,1.56919201590938,1.37921532141349,1.50939302401662,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0.229723400206959,1.52234282769651,0,0,1.42939065274673,2.05681136543097,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0,1.30062222588003,0.144269212976445,0.426851060090485,0.318852545457645,1.1974762285969,0,4.65681881992542,0.649243880549111,0.842391534340376,0,0.626719583092093,0,2.37008488922245,0.802940375518498,0.403599414382095,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,1.4098700508785,0,0.879049075631364,0,0.334330152832435,0,0,0,0,0,0,0,0,0.63337622438398,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,1.479651084554,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0.583209226766509,0,0,0,0,0.331737779793674,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,2.04386596391473,1.09886179476517,0.332423363800313,0,0,0,0,1.11255605286265,0,0,0,0,0,0.530745387020035,1.83309043480088,0,0,0,0.202203398942031,0,0,1.094728735294,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0.264768380074501,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0,2.45611048905698,0.157204305099666,0,0.496166021811951,0,0.852548188666271,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.554645257684261,0,0,0.124980407962107,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,2.74128883428591,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.39246546425257,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0.940634592723046,0.245148321753905,0,0.196308467114945,2.0793248022896,0,0,0.375935671919414,1.4180735354187,0,0,0,0,1.46067277649303,3.21110498383179,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.952257725854961,2.19602293442421,11.4217474304379,0,0.190941474834495,0,0.653150243690884,0.342233301085281,0.80822463617505,0.502055437748735,0,0,0,0,0,0,0.244482888365733,0,1.99727032255654,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0706351847777,0.464448369948228,0,0,0,1.08454080812422,1.70603078984906,1.46800219667424,0,0.401088894940283,0.217010870715852,0.671746422719773,0,0.77272670290256,0,0.377875943688809,0,0.697287110717054,0.411167888021826,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,3.51992488922645,1.63841583378639,1.77901850772711,0.426730222566507,1.20118796110804,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,2.64342657158052,2.80254281490768,0.790152254325231,2.55722701147983,1.17903228824749,1.23360899399706,1.5046784585161,1.30368906653436,1.4203434172042,1.94826728407911,1.55974639639243,3.24066498222321,2.43687284041983,3.24964636518019,0.896639238079726,1.43065282315866,0.657751618414705,2.21080014228679,3.47763702882063,4.89345658434799,4.54819407752512,1.04535523804977,2.15287751125376,1.53288197440768,2.06176467289578,4.80737414837055,4.14135038621326,2.60433381542567,1.90090408889675,2.86092726247768,3.07167866770604,1.24930726552346,2.36777252044017,0.821127996921047,1.81446068902259,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.522389211897802,0.664789802594326,0.476981248610684,0,0.371457501329565,1.39133685156694,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0.66944122552934,0,0.760272105718513,0,1.10298924103761,0,1.07159673940896,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0.141775097242386,0,0,0,0.985326475791887,0.264145302039678,1.86595303986695,0.288239906833923,1.76739406796932,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,1.56919201590938,1.37921532141349,1.50939302401662,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0.229723400206959,1.52234282769651,0,0,1.42939065274673,2.05681136543097,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0,1.30062222588003,0.144269212976445,0.426851060090485,0.318852545457645,1.1974762285969,0,4.65681881992542,0.649243880549111,0.842391534340376,0,0.626719583092093,0,2.37008488922245,0.802940375518498,0.403599414382095,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,1.4098700508785,0,0.879049075631364,0,0.334330152832435,0,0,0,0,0,0,0,0,0.63337622438398,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,1.479651084554,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0.583209226766509,0,0,0,0,0.331737779793674,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,2.04386596391473,1.09886179476517,0.332423363800313,0,0,0,0,1.11255605286265,0,0,0,0,0,0.530745387020035,1.83309043480088,0,0,0,0.202203398942031,0,0,1.094728735294,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0.264768380074501,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0,2.45611048905698,0.157204305099666,0,0.496166021811951,0,0.852548188666271,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.554645257684261,0,0,0.124980407962107,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,2.74128883428591,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.39246546425257,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0.940634592723046,0.245148321753905,0,0.196308467114945,2.0793248022896,0,0,0.375935671919414,1.4180735354187,0,0,0,0,1.46067277649303,3.21110498383179,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.952257725854961,2.19602293442421,11.4217474304379,0,0.190941474834495,0,0.653150243690884,0.342233301085281,0.80822463617505,0.502055437748735,0,0,0,0,0,0,0.244482888365733,0,1.99727032255654,0.603821380773079,0 | ||
|short_description=p18@PRKACB | |short_description=p18@PRKACB | ||
}} | }} |
Revision as of 19:29, 15 November 2012
Short description: | p18@PRKACB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_PRKACB_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000470673_5end |
EntrezGene: | PRKACB |
HGNC: | 9381 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.42e-32 | 18 |
alpha-beta T cell | 8.42e-32 | 18 |
immature T cell | 8.42e-32 | 18 |
mature T cell | 8.42e-32 | 18 |
immature alpha-beta T cell | 8.42e-32 | 18 |
lymphocyte | 1.10e-30 | 53 |
common lymphoid progenitor | 1.10e-30 | 53 |
lymphoid lineage restricted progenitor cell | 3.88e-29 | 52 |
T cell | 1.04e-24 | 25 |
pro-T cell | 1.04e-24 | 25 |
CD8-positive, alpha-beta T cell | 2.03e-17 | 11 |
hematopoietic stem cell | 4.21e-15 | 168 |
hematopoietic oligopotent progenitor cell | 3.63e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-14 | 161 |
CD4-positive, alpha-beta T cell | 3.71e-14 | 6 |
nongranular leukocyte | 7.89e-14 | 115 |
hematopoietic cell | 8.74e-14 | 177 |
leukocyte | 2.43e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 6.64e-13 | 120 |
naive T cell | 3.98e-08 | 3 |
natural killer cell | 8.87e-08 | 3 |
pro-NK cell | 8.87e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 7.18e-12 | 10 |
thymus | 1.02e-10 | 4 |
hemolymphoid system gland | 1.02e-10 | 4 |
thymic region | 1.02e-10 | 4 |
pharyngeal gland | 1.02e-10 | 4 |
thymus primordium | 1.02e-10 | 4 |
hemopoietic organ | 6.29e-09 | 7 |
immune organ | 6.29e-09 | 7 |
blood | 2.88e-07 | 15 |
haemolymphatic fluid | 2.88e-07 | 15 |
organism substance | 2.88e-07 | 15 |
pharyngeal epithelium | 4.03e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.