FFCP PHASE1:Hg19::chr7:94047099..94047117,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.24e-49!180;CL:0000057!6.15e-30!75;CL:0000680!1.24e-20!57;CL:0000056!1.24e-20!57;CL:0000355!1.24e-20!57;CL:0000187!1.06e-19!54;CL:0000183!7.04e-19!59;CL:0000393!7.49e-19!60;CL:0000211!7.49e-19!60;CL:0000048!4.29e-18!430;CL:0000192!1.25e-17!42;CL:0000514!1.25e-17!42;CL:0000723!5.73e-17!436;CL:0000034!3.66e-16!444;CL:0000359!6.62e-14!32;CL:0002620!2.52e-13!23;CL:0002371!9.37e-10!591;CL:0002334!3.88e-08!12;CL:0000144!1.94e-07!625;CL:0002494!2.46e-07!16;CL:0002320!4.07e-07!365 | |ontology_enrichment_celltype=CL:0000055!1.24e-49!180;CL:0000057!6.15e-30!75;CL:0000680!1.24e-20!57;CL:0000056!1.24e-20!57;CL:0000355!1.24e-20!57;CL:0000187!1.06e-19!54;CL:0000183!7.04e-19!59;CL:0000393!7.49e-19!60;CL:0000211!7.49e-19!60;CL:0000048!4.29e-18!430;CL:0000192!1.25e-17!42;CL:0000514!1.25e-17!42;CL:0000723!5.73e-17!436;CL:0000034!3.66e-16!444;CL:0000359!6.62e-14!32;CL:0002620!2.52e-13!23;CL:0002371!9.37e-10!591;CL:0002334!3.88e-08!12;CL:0000144!1.94e-07!625;CL:0002494!2.46e-07!16;CL:0002320!4.07e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.09e-14;32!CL:0000192;9.71e-13;43!CL:0000134;1.13e-12;55!CL:0000187;1.56e-11;55!CL:0000723;1.59e-11;61!CL:0000048;3.83e-11;58!CL:0002620;3.09e-10;23!CL:0002320;5.69e-10;188!CL:0000057;1.45e-09;73!CL:0002334;7.19e-09;12!CL:0000393;7.36e-09;61!CL:0000211;7.36e-09;61!CL:0000034;3.25e-08;69!CL:0000499;6.26e-08;28!CL:0002494;2.48e-07;16 | |ontology_enrichment_celltype_v019=CL:0000359;3.09e-14;32!CL:0000192;9.71e-13;43!CL:0000134;1.13e-12;55!CL:0000187;1.56e-11;55!CL:0000723;1.59e-11;61!CL:0000048;3.83e-11;58!CL:0002620;3.09e-10;23!CL:0002320;5.69e-10;188!CL:0000057;1.45e-09;73!CL:0002334;7.19e-09;12!CL:0000393;7.36e-09;61!CL:0000211;7.36e-09;61!CL:0000034;3.25e-08;69!CL:0000499;6.26e-08;28!CL:0002494;2.48e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.48e-26,76;CL:0000048,1.37e-24,427;CL:0000723,1.52e-23,433;CL:0000034,3.34e-22,441;CL:0000680,6.66e-20,58;CL:0000056,6.66e-20,58;CL:0000355,6.66e-20,58;CL:0000187,1.50e-19,55;CL:0000192,3.53e-17,43;CL:0000514,3.53e-17,43;CL:0000393,3.06e-16,61;CL:0000211,3.06e-16,61;CL:0000359,1.30e-14,32;CL:0002320,2.40e-11,361;CL:0000134,7.72e-11,354;CL:0002620,2.78e-10,23;CL:0002334,7.90e-09,12;CL:0000499,5.58e-08,28;CL:0000219,7.19e-08,386;CL:0002494,2.68e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;9.71e-13;43!CL:0000355;1.79e-10;58 | |ontology_enrichment_development_v019=CL:0000514;9.71e-13;43!CL:0000355;1.79e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!2.96e-07!14 | |ontology_enrichment_disease=DOID:2394!2.96e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.34e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;7.34e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.10e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.01e-23!83;UBERON:0002329!1.01e-23!83;UBERON:0003077!1.01e-23!83;UBERON:0003059!1.01e-23!83;UBERON:0007282!1.01e-23!83;UBERON:0009618!1.01e-23!83;UBERON:0007285!1.01e-23!83;UBERON:0004290!2.06e-23!70;UBERON:0001134!1.73e-20!61;UBERON:0002036!1.73e-20!61;UBERON:0003082!1.73e-20!61;UBERON:0002385!3.58e-19!63;UBERON:0001015!3.58e-19!63;UBERON:0000383!3.58e-19!63;UBERON:0000486!9.75e-19!82;UBERON:0004872!3.17e-13!84;UBERON:0005256!4.46e-13!143;UBERON:0002199!8.91e-11!45;UBERON:0002416!8.91e-11!45;UBERON:0001637!2.47e-10!42;UBERON:0003509!2.47e-10!42;UBERON:0004572!2.47e-10!42;UBERON:0004573!2.37e-09!33;UBERON:0004571!2.37e-09!33;UBERON:0003102!3.07e-09!95;UBERON:0002049!3.73e-09!79;UBERON:0007798!3.73e-09!79;UBERON:0004535!3.94e-09!110;UBERON:0002097!4.45e-09!40;UBERON:0001009!8.47e-09!113;UBERON:0000948!1.33e-08!24;UBERON:0005498!1.33e-08!24;UBERON:0004140!1.33e-08!24;UBERON:0009881!1.33e-08!24;UBERON:0004141!1.33e-08!24;UBERON:0003084!1.33e-08!24;UBERON:0007005!1.33e-08!24;UBERON:0004139!1.33e-08!24;UBERON:0004291!1.33e-08!24;UBERON:0002100!2.79e-08!216;UBERON:0001981!9.74e-08!60;UBERON:0007500!9.74e-08!60;UBERON:0004537!9.74e-08!60;UBERON:0006965!9.74e-08!60;UBERON:0002384!9.95e-08!375;UBERON:0000475!1.36e-07!365;UBERON:0007100!1.46e-07!27;UBERON:0000490!1.62e-07!138;UBERON:0004923!2.18e-07!57 | |ontology_enrichment_uberon=UBERON:0000914!1.01e-23!83;UBERON:0002329!1.01e-23!83;UBERON:0003077!1.01e-23!83;UBERON:0003059!1.01e-23!83;UBERON:0007282!1.01e-23!83;UBERON:0009618!1.01e-23!83;UBERON:0007285!1.01e-23!83;UBERON:0004290!2.06e-23!70;UBERON:0001134!1.73e-20!61;UBERON:0002036!1.73e-20!61;UBERON:0003082!1.73e-20!61;UBERON:0002385!3.58e-19!63;UBERON:0001015!3.58e-19!63;UBERON:0000383!3.58e-19!63;UBERON:0000486!9.75e-19!82;UBERON:0004872!3.17e-13!84;UBERON:0005256!4.46e-13!143;UBERON:0002199!8.91e-11!45;UBERON:0002416!8.91e-11!45;UBERON:0001637!2.47e-10!42;UBERON:0003509!2.47e-10!42;UBERON:0004572!2.47e-10!42;UBERON:0004573!2.37e-09!33;UBERON:0004571!2.37e-09!33;UBERON:0003102!3.07e-09!95;UBERON:0002049!3.73e-09!79;UBERON:0007798!3.73e-09!79;UBERON:0004535!3.94e-09!110;UBERON:0002097!4.45e-09!40;UBERON:0001009!8.47e-09!113;UBERON:0000948!1.33e-08!24;UBERON:0005498!1.33e-08!24;UBERON:0004140!1.33e-08!24;UBERON:0009881!1.33e-08!24;UBERON:0004141!1.33e-08!24;UBERON:0003084!1.33e-08!24;UBERON:0007005!1.33e-08!24;UBERON:0004139!1.33e-08!24;UBERON:0004291!1.33e-08!24;UBERON:0002100!2.79e-08!216;UBERON:0001981!9.74e-08!60;UBERON:0007500!9.74e-08!60;UBERON:0004537!9.74e-08!60;UBERON:0006965!9.74e-08!60;UBERON:0002384!9.95e-08!375;UBERON:0000475!1.36e-07!365;UBERON:0007100!1.46e-07!27;UBERON:0000490!1.62e-07!138;UBERON:0004923!2.18e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.95e-10;198!UBERON:0004573;6.02e-09;33!UBERON:0004571;6.02e-09;33!UBERON:0001637;2.65e-08;42!UBERON:0003509;2.65e-08;42!UBERON:0004572;2.65e-08;42!UBERON:0004457;8.50e-08;9!UBERON:0000042;8.50e-08;9!UBERON:0002199;2.15e-07;46!UBERON:0002416;2.15e-07;46!UBERON:0003688;2.75e-07;6!UBERON:0002358;2.75e-07;6!UBERON:0003684;2.75e-07;6!UBERON:0001178;2.75e-07;6!UBERON:0002097;8.54e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002384;7.95e-10;198!UBERON:0004573;6.02e-09;33!UBERON:0004571;6.02e-09;33!UBERON:0001637;2.65e-08;42!UBERON:0003509;2.65e-08;42!UBERON:0004572;2.65e-08;42!UBERON:0004457;8.50e-08;9!UBERON:0000042;8.50e-08;9!UBERON:0002199;2.15e-07;46!UBERON:0002416;2.15e-07;46!UBERON:0003688;2.75e-07;6!UBERON:0002358;2.75e-07;6!UBERON:0003684;2.75e-07;6!UBERON:0001178;2.75e-07;6!UBERON:0002097;8.54e-07;41 | ||
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| ||
|short_description=p7@COL1A2 | |short_description=p7@COL1A2 | ||
}} | }} |
Revision as of 01:59, 16 November 2012
Short description: | p7@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 15bp_to_ENST00000461525_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.48e-26 | 76 |
multi fate stem cell | 1.37e-24 | 427 |
somatic stem cell | 1.52e-23 | 433 |
stem cell | 3.34e-22 | 441 |
muscle precursor cell | 6.66e-20 | 58 |
myoblast | 6.66e-20 | 58 |
multi-potent skeletal muscle stem cell | 6.66e-20 | 58 |
muscle cell | 1.50e-19 | 55 |
smooth muscle cell | 3.53e-17 | 43 |
smooth muscle myoblast | 3.53e-17 | 43 |
electrically responsive cell | 3.06e-16 | 61 |
electrically active cell | 3.06e-16 | 61 |
vascular associated smooth muscle cell | 1.30e-14 | 32 |
connective tissue cell | 2.40e-11 | 361 |
mesenchymal cell | 7.72e-11 | 354 |
skin fibroblast | 2.78e-10 | 23 |
preadipocyte | 7.90e-09 | 12 |
stromal cell | 5.58e-08 | 28 |
motile cell | 7.19e-08 | 386 |
cardiocyte | 2.68e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.10e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.