FFCP PHASE1:Hg19::chr1:183213228..183213235,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!1.50e-32!43;CL:0002368!6.22e-23!13;CL:0000223!1.37e-22!59;CL:0000066!3.55e-20!254;CL:0002621!5.17e-16!3;CL:0002251!1.43e-13!21;CL:0002159!1.78e-13!13;CL:0000244!7.38e-12!4;CL:0000731!7.38e-12!4;CL:0000362!3.06e-10!8;CL:0000312!1.19e-09!5;CL:0000622!3.96e-09!5;CL:0002202!8.96e-09!9;CL:0002632!8.96e-09!9;CL:0000240!4.13e-08!6;CL:0000311!4.13e-08!6;CL:0000079!4.13e-08!6;CL:0000237!4.13e-08!6;CL:0000036!4.13e-08!6;CL:0000357!4.13e-08!6;CL:0000114!4.13e-08!6;CL:0002166!8.52e-08!3;CL:0000154!1.11e-07!6;CL:0002231!1.54e-07!3;CL:0000220!1.66e-07!246;CL:0002321!2.11e-07!248;CL:0002328!2.26e-07!3;CL:0002623!4.01e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.50e-32!43;CL:0002368!6.22e-23!13;CL:0000223!1.37e-22!59;CL:0000066!3.55e-20!254;CL:0002621!5.17e-16!3;CL:0002251!1.43e-13!21;CL:0002159!1.78e-13!13;CL:0000244!7.38e-12!4;CL:0000731!7.38e-12!4;CL:0000362!3.06e-10!8;CL:0000312!1.19e-09!5;CL:0000622!3.96e-09!5;CL:0002202!8.96e-09!9;CL:0002632!8.96e-09!9;CL:0000240!4.13e-08!6;CL:0000311!4.13e-08!6;CL:0000079!4.13e-08!6;CL:0000237!4.13e-08!6;CL:0000036!4.13e-08!6;CL:0000357!4.13e-08!6;CL:0000114!4.13e-08!6;CL:0002166!8.52e-08!3;CL:0000154!1.11e-07!6;CL:0002231!1.54e-07!3;CL:0000220!1.66e-07!246;CL:0002321!2.11e-07!248;CL:0002328!2.26e-07!3;CL:0002623!4.01e-07!3 | ||
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|ontology_enrichment_celltype_v019_2=CL:0002621,2.87e-53,3;CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4;CL:0002076,2.52e-09,42;CL:0000312,3.49e-09,5;CL:0002251,5.93e-09,20;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6;CL:0000223,5.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.87e-53,3;UBERON:0003350,8.98e-21,8;UBERON:0001828,8.98e-21,8;UBERON:0003729,3.22e-13,13;UBERON:0000365,2.97e-09,5;UBERON:0000344,5.93e-09,20;UBERON:0000166,3.15e-08,22;UBERON:0005910,6.34e-08,6 | |||
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|short_description=p@chr1:183213228..183213235,+ | |short_description=p@chr1:183213228..183213235,+ | ||
}} | }} |
Revision as of 04:20, 16 November 2012
Short description: | p@chr1:183213228..183213235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183213228..183213235, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.87e-53 | 3 |
transitional epithelial cell | 3.10e-11 | 4 |
urothelial cell | 3.10e-11 | 4 |
endo-epithelial cell | 2.52e-09 | 42 |
keratinocyte | 3.49e-09 | 5 |
epithelial cell of alimentary canal | 5.93e-09 | 20 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
endodermal cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.87e-53 | 3 |
epithelium of mucosa | 8.98e-21 | 8 |
gingiva | 8.98e-21 | 8 |
mouth mucosa | 3.22e-13 | 13 |
urothelium | 2.97e-09 | 5 |
mucosa | 5.93e-09 | 20 |
oral opening | 3.15e-08 | 22 |
transitional epithelium | 6.34e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.