FFCP PHASE1:Hg19::chr5:121413944..121413965,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.36e-43!180;CL:0000057!3.01e-25!75;CL:0000222!4.63e-20!119;CL:0000680!1.53e-18!57;CL:0000056!1.53e-18!57;CL:0000355!1.53e-18!57;CL:0000187!1.79e-17!54;CL:0000183!1.42e-16!59;CL:0000393!1.48e-15!60;CL:0000211!1.48e-15!60;CL:0000192!2.14e-15!42;CL:0000514!2.14e-15!42;CL:0000359!1.20e-12!32;CL:0000220!3.85e-12!246;CL:0002321!1.53e-11!248;CL:0002620!6.29e-11!23;CL:0002334!4.84e-08!12;CL:0000144!4.73e-07!625;CL:0000136!5.57e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.36e-43!180;CL:0000057!3.01e-25!75;CL:0000222!4.63e-20!119;CL:0000680!1.53e-18!57;CL:0000056!1.53e-18!57;CL:0000355!1.53e-18!57;CL:0000187!1.79e-17!54;CL:0000183!1.42e-16!59;CL:0000393!1.48e-15!60;CL:0000211!1.48e-15!60;CL:0000192!2.14e-15!42;CL:0000514!2.14e-15!42;CL:0000359!1.20e-12!32;CL:0000220!3.85e-12!246;CL:0002321!1.53e-11!248;CL:0002620!6.29e-11!23;CL:0002334!4.84e-08!12;CL:0000144!4.73e-07!625;CL:0000136!5.57e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.64e-12;32!CL:0000192;7.56e-12;43!CL:0002620;2.64e-11;23!CL:0000057;7.68e-11;73!CL:0000187;2.26e-10;55!CL:0000393;2.25e-08;61!CL:0000211;2.25e-08;61!CL:0000134;2.31e-08;55!CL:0002334;2.70e-08;12!CL:0002320;2.74e-08;188!CL:0000048;9.46e-08;58!CL:0000723;1.03e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;2.64e-12;32!CL:0000192;7.56e-12;43!CL:0002620;2.64e-11;23!CL:0000057;7.68e-11;73!CL:0000187;2.26e-10;55!CL:0000393;2.25e-08;61!CL:0000211;2.25e-08;61!CL:0000134;2.31e-08;55!CL:0002334;2.70e-08;12!CL:0002320;2.74e-08;188!CL:0000048;9.46e-08;58!CL:0000723;1.03e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.58e-27,76;CL:0000222,5.57e-21,121;CL:0000680,1.56e-19,58;CL:0000056,1.56e-19,58;CL:0000355,1.56e-19,58;CL:0000187,2.03e-18,55;CL:0000192,2.97e-16,43;CL:0000514,2.97e-16,43;CL:0000393,9.47e-16,61;CL:0000211,9.47e-16,61;CL:0000359,4.42e-13,32;CL:0002620,2.72e-11,23;CL:0002321,6.75e-11,250;CL:0002334,2.70e-08,12;CL:0000048,2.56e-07,427;CL:0000136,3.41e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;7.56e-12;43!CL:0000355;1.44e-10;58 | |ontology_enrichment_development_v019=CL:0000514;7.56e-12;43!CL:0000355;1.44e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!7.47e-07!14 | |ontology_enrichment_disease=DOID:2394!7.47e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.96e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;4.96e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.27e-21!83;UBERON:0002329!1.27e-21!83;UBERON:0003077!1.27e-21!83;UBERON:0003059!1.27e-21!83;UBERON:0007282!1.27e-21!83;UBERON:0009618!1.27e-21!83;UBERON:0007285!1.27e-21!83;UBERON:0004290!1.68e-20!70;UBERON:0005256!9.87e-19!143;UBERON:0001134!1.03e-18!61;UBERON:0002036!1.03e-18!61;UBERON:0003082!1.03e-18!61;UBERON:0002385!2.60e-18!63;UBERON:0001015!2.60e-18!63;UBERON:0000383!2.60e-18!63;UBERON:0000486!7.08e-18!82;UBERON:0004872!1.50e-17!84;UBERON:0002049!7.52e-17!79;UBERON:0007798!7.52e-17!79;UBERON:0000490!9.68e-15!138;UBERON:0003914!1.88e-14!118;UBERON:0000055!2.80e-14!69;UBERON:0002100!5.52e-14!216;UBERON:0001981!6.17e-14!60;UBERON:0007500!6.17e-14!60;UBERON:0004537!6.17e-14!60;UBERON:0006965!6.17e-14!60;UBERON:0000475!3.44e-13!365;UBERON:0001637!5.29e-13!42;UBERON:0003509!5.29e-13!42;UBERON:0004572!5.29e-13!42;UBERON:0004535!2.28e-12!110;UBERON:0001009!2.63e-12!113;UBERON:0000468!1.58e-11!659;UBERON:0004573!1.62e-11!33;UBERON:0004571!1.62e-11!33;UBERON:0003104!6.65e-11!238;UBERON:0009142!6.65e-11!238;UBERON:0000481!1.41e-10!347;UBERON:0000119!9.30e-10!312;UBERON:0000483!2.38e-09!309;UBERON:0003102!2.92e-09!95;UBERON:0000477!2.07e-08!286;UBERON:0000467!2.13e-08!625;UBERON:0000480!3.42e-08!626;UBERON:0002199!3.73e-08!45;UBERON:0002416!3.73e-08!45;UBERON:0000948!2.98e-07!24;UBERON:0005498!2.98e-07!24;UBERON:0004140!2.98e-07!24;UBERON:0009881!2.98e-07!24;UBERON:0004141!2.98e-07!24;UBERON:0003084!2.98e-07!24;UBERON:0007005!2.98e-07!24;UBERON:0004139!2.98e-07!24;UBERON:0004291!2.98e-07!24;UBERON:0000947!6.69e-07!21;UBERON:0010191!6.69e-07!21;UBERON:0007100!6.82e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!1.27e-21!83;UBERON:0002329!1.27e-21!83;UBERON:0003077!1.27e-21!83;UBERON:0003059!1.27e-21!83;UBERON:0007282!1.27e-21!83;UBERON:0009618!1.27e-21!83;UBERON:0007285!1.27e-21!83;UBERON:0004290!1.68e-20!70;UBERON:0005256!9.87e-19!143;UBERON:0001134!1.03e-18!61;UBERON:0002036!1.03e-18!61;UBERON:0003082!1.03e-18!61;UBERON:0002385!2.60e-18!63;UBERON:0001015!2.60e-18!63;UBERON:0000383!2.60e-18!63;UBERON:0000486!7.08e-18!82;UBERON:0004872!1.50e-17!84;UBERON:0002049!7.52e-17!79;UBERON:0007798!7.52e-17!79;UBERON:0000490!9.68e-15!138;UBERON:0003914!1.88e-14!118;UBERON:0000055!2.80e-14!69;UBERON:0002100!5.52e-14!216;UBERON:0001981!6.17e-14!60;UBERON:0007500!6.17e-14!60;UBERON:0004537!6.17e-14!60;UBERON:0006965!6.17e-14!60;UBERON:0000475!3.44e-13!365;UBERON:0001637!5.29e-13!42;UBERON:0003509!5.29e-13!42;UBERON:0004572!5.29e-13!42;UBERON:0004535!2.28e-12!110;UBERON:0001009!2.63e-12!113;UBERON:0000468!1.58e-11!659;UBERON:0004573!1.62e-11!33;UBERON:0004571!1.62e-11!33;UBERON:0003104!6.65e-11!238;UBERON:0009142!6.65e-11!238;UBERON:0000481!1.41e-10!347;UBERON:0000119!9.30e-10!312;UBERON:0000483!2.38e-09!309;UBERON:0003102!2.92e-09!95;UBERON:0000477!2.07e-08!286;UBERON:0000467!2.13e-08!625;UBERON:0000480!3.42e-08!626;UBERON:0002199!3.73e-08!45;UBERON:0002416!3.73e-08!45;UBERON:0000948!2.98e-07!24;UBERON:0005498!2.98e-07!24;UBERON:0004140!2.98e-07!24;UBERON:0009881!2.98e-07!24;UBERON:0004141!2.98e-07!24;UBERON:0003084!2.98e-07!24;UBERON:0007005!2.98e-07!24;UBERON:0004139!2.98e-07!24;UBERON:0004291!2.98e-07!24;UBERON:0000947!6.69e-07!21;UBERON:0010191!6.69e-07!21;UBERON:0007100!6.82e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.89e-11;33!UBERON:0004571;9.89e-11;33!UBERON:0001637;1.25e-09;42!UBERON:0003509;1.25e-09;42!UBERON:0004572;1.25e-09;42!UBERON:0002384;6.99e-09;198!UBERON:0002385;5.77e-08;31!UBERON:0001015;5.77e-08;31!UBERON:0000383;5.77e-08;31!UBERON:0007500;7.86e-08;56!UBERON:0001981;7.86e-08;56!UBERON:0004537;7.86e-08;56!UBERON:0002049;3.26e-07;75!UBERON:0007798;3.26e-07;75!UBERON:0000947;4.20e-07;21!UBERON:0010191;4.20e-07;21!UBERON:0000055;4.28e-07;65!UBERON:0000948;7.34e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004573;9.89e-11;33!UBERON:0004571;9.89e-11;33!UBERON:0001637;1.25e-09;42!UBERON:0003509;1.25e-09;42!UBERON:0004572;1.25e-09;42!UBERON:0002384;6.99e-09;198!UBERON:0002385;5.77e-08;31!UBERON:0001015;5.77e-08;31!UBERON:0000383;5.77e-08;31!UBERON:0007500;7.86e-08;56!UBERON:0001981;7.86e-08;56!UBERON:0004537;7.86e-08;56!UBERON:0002049;3.26e-07;75!UBERON:0007798;3.26e-07;75!UBERON:0000947;4.20e-07;21!UBERON:0010191;4.20e-07;21!UBERON:0000055;4.28e-07;65!UBERON:0000948;7.34e-07;22 | ||
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| ||
|short_description=p1@LOX | |short_description=p1@LOX | ||
}} | }} |
Revision as of 00:55, 17 November 2012
Short description: | p1@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOX_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | 0bp_to_ENST00000543620_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | B4DQF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.58e-27 | 76 |
mesodermal cell | 5.57e-21 | 121 |
muscle precursor cell | 1.56e-19 | 58 |
myoblast | 1.56e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-19 | 58 |
muscle cell | 2.03e-18 | 55 |
smooth muscle cell | 2.97e-16 | 43 |
smooth muscle myoblast | 2.97e-16 | 43 |
electrically responsive cell | 9.47e-16 | 61 |
electrically active cell | 9.47e-16 | 61 |
vascular associated smooth muscle cell | 4.42e-13 | 32 |
skin fibroblast | 2.72e-11 | 23 |
embryonic cell | 6.75e-11 | 250 |
preadipocyte | 2.70e-08 | 12 |
multi fate stem cell | 2.56e-07 | 427 |
fat cell | 3.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.63e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.