FFCP PHASE1:Hg19::chr15:63353058..63353095,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.78e-13!180;CL:0000359!6.92e-10!32;CL:0000192!1.00e-07!42;CL:0000514!1.00e-07!42;CL:0000057!2.41e-07!75;CL:0000077!3.65e-07!19 | |ontology_enrichment_celltype=CL:0000055!1.78e-13!180;CL:0000359!6.92e-10!32;CL:0000192!1.00e-07!42;CL:0000514!1.00e-07!42;CL:0000057!2.41e-07!75;CL:0000077!3.65e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.50e-11;32 | |ontology_enrichment_celltype_v019=CL:0000359;3.50e-11;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.43e-11,32;CL:0000192,6.34e-08,43;CL:0000514,6.34e-08,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.56e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;5.56e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.84e-09!84;UBERON:0000481!1.44e-08!347;UBERON:0002049!5.80e-08!79;UBERON:0007798!5.80e-08!79;UBERON:0005256!8.42e-08!143;UBERON:0001637!8.99e-08!42;UBERON:0003509!8.99e-08!42;UBERON:0004572!8.99e-08!42;UBERON:0001981!1.82e-07!60;UBERON:0007500!1.82e-07!60;UBERON:0004537!1.82e-07!60;UBERON:0006965!1.82e-07!60;UBERON:0007100!2.05e-07!27;UBERON:0002385!2.31e-07!63;UBERON:0001015!2.31e-07!63;UBERON:0000383!2.31e-07!63;UBERON:0001009!5.10e-07!113;UBERON:0000914!7.25e-07!83;UBERON:0002329!7.25e-07!83;UBERON:0003077!7.25e-07!83;UBERON:0003059!7.25e-07!83;UBERON:0007282!7.25e-07!83;UBERON:0009618!7.25e-07!83;UBERON:0007285!7.25e-07!83;UBERON:0001134!7.47e-07!61;UBERON:0002036!7.47e-07!61;UBERON:0003082!7.47e-07!61;UBERON:0005156!8.02e-07!59;UBERON:0000990!8.02e-07!59;UBERON:0000055!8.51e-07!69;UBERON:0000468!9.18e-07!659 | |ontology_enrichment_uberon=UBERON:0004872!5.84e-09!84;UBERON:0000481!1.44e-08!347;UBERON:0002049!5.80e-08!79;UBERON:0007798!5.80e-08!79;UBERON:0005256!8.42e-08!143;UBERON:0001637!8.99e-08!42;UBERON:0003509!8.99e-08!42;UBERON:0004572!8.99e-08!42;UBERON:0001981!1.82e-07!60;UBERON:0007500!1.82e-07!60;UBERON:0004537!1.82e-07!60;UBERON:0006965!1.82e-07!60;UBERON:0007100!2.05e-07!27;UBERON:0002385!2.31e-07!63;UBERON:0001015!2.31e-07!63;UBERON:0000383!2.31e-07!63;UBERON:0001009!5.10e-07!113;UBERON:0000914!7.25e-07!83;UBERON:0002329!7.25e-07!83;UBERON:0003077!7.25e-07!83;UBERON:0003059!7.25e-07!83;UBERON:0007282!7.25e-07!83;UBERON:0009618!7.25e-07!83;UBERON:0007285!7.25e-07!83;UBERON:0001134!7.47e-07!61;UBERON:0002036!7.47e-07!61;UBERON:0003082!7.47e-07!61;UBERON:0005156!8.02e-07!59;UBERON:0000990!8.02e-07!59;UBERON:0000055!8.51e-07!69;UBERON:0000468!9.18e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.48e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0007100;2.48e-08;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.53e-09,27;UBERON:0001637,3.78e-08,42;UBERON:0003509,3.78e-08,42;UBERON:0004572,3.78e-08,42;UBERON:0004872,5.02e-08,83;UBERON:0003104,6.34e-08,160;UBERON:0009142,6.34e-08,160;UBERON:0005256,1.16e-07,122;UBERON:0002385,3.08e-07,64;UBERON:0001015,3.08e-07,64;UBERON:0000383,3.08e-07,64;UBERON:0002049,5.37e-07,78;UBERON:0007798,5.37e-07,78;UBERON:0004573,5.41e-07,33;UBERON:0004571,5.41e-07,33;UBERON:0007500,5.61e-07,59;UBERON:0001981,5.61e-07,59;UBERON:0004537,5.61e-07,59;UBERON:0006965,5.61e-07,59;UBERON:0001134,5.74e-07,62;UBERON:0002036,5.74e-07,62;UBERON:0003082,5.74e-07,62;UBERON:0001009,6.08e-07,112 | |||
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| ||
|short_description=p10@TPM1 | |short_description=p10@TPM1 | ||
}} | }} |
Revision as of 03:21, 17 November 2012
Short description: | p10@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TPM1_5end |
Coexpression cluster: | C1041_heart_hepatic_left_mesodermal_smooth_spindle_skeletal |
Association with transcript: | -337bp_to_ENST00000561242_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.43e-11 | 32 |
smooth muscle cell | 6.34e-08 | 43 |
smooth muscle myoblast | 6.34e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.53e-09 | 27 |
artery | 3.78e-08 | 42 |
arterial blood vessel | 3.78e-08 | 42 |
arterial system | 3.78e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 5.02e-08 | 83 |
mesenchyme | 6.34e-08 | 160 |
entire embryonic mesenchyme | 6.34e-08 | 160 |
trunk mesenchyme | 1.16e-07 | 122 |
muscle tissue | 3.08e-07 | 64 |
musculature | 3.08e-07 | 64 |
musculature of body | 3.08e-07 | 64 |
vasculature | 5.37e-07 | 78 |
vascular system | 5.37e-07 | 78 |
systemic artery | 5.41e-07 | 33 |
systemic arterial system | 5.41e-07 | 33 |
epithelial tube open at both ends | 5.61e-07 | 59 |
blood vessel | 5.61e-07 | 59 |
blood vasculature | 5.61e-07 | 59 |
vascular cord | 5.61e-07 | 59 |
skeletal muscle tissue | 5.74e-07 | 62 |
striated muscle tissue | 5.74e-07 | 62 |
myotome | 5.74e-07 | 62 |
circulatory system | 6.08e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.92e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.