FFCP PHASE1:Hg19::chr3:35683019..35683037,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;4.61e-26;1 | |ontology_enrichment_celltype_v019=CL:0000817;4.61e-26;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.40e-14;2 | |ontology_enrichment_development_v019=UBERON:0006965;9.40e-14;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.60e-08,51;DOID:0060083,3.60e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.38e-27!32;UBERON:0001893!1.60e-25!34;UBERON:0002791!4.35e-22!33;UBERON:0002020!2.11e-21!34;UBERON:0003528!2.11e-21!34;UBERON:0002780!6.55e-21!41;UBERON:0001890!6.55e-21!41;UBERON:0006240!6.55e-21!41;UBERON:0003080!2.25e-20!42;UBERON:0001950!1.58e-19!20;UBERON:0002619!9.77e-18!22;UBERON:0001049!3.10e-17!57;UBERON:0005068!3.10e-17!57;UBERON:0006241!3.10e-17!57;UBERON:0007135!3.10e-17!57;UBERON:0002616!1.40e-16!59;UBERON:0000369!7.84e-16!4;UBERON:0002435!7.84e-16!4;UBERON:0000204!7.84e-16!4;UBERON:0010082!7.84e-16!4;UBERON:0000956!1.44e-15!25;UBERON:0000203!1.44e-15!25;UBERON:0000955!1.22e-13!69;UBERON:0006238!1.22e-13!69;UBERON:0003056!1.81e-13!61;UBERON:0001017!3.78e-13!82;UBERON:0001872!9.59e-13!5;UBERON:0005743!1.98e-12!86;UBERON:0000153!9.21e-12!129;UBERON:0007811!9.21e-12!129;UBERON:0000073!4.93e-11!94;UBERON:0001016!4.93e-11!94;UBERON:0003075!1.09e-10!86;UBERON:0007284!1.09e-10!86;UBERON:0000200!1.32e-10!6;UBERON:0002346!4.08e-10!90;UBERON:0005383!4.12e-10!3;UBERON:0005382!4.12e-10!3;UBERON:0004177!8.50e-10!7;UBERON:0009663!2.82e-09!7;UBERON:0007023!6.17e-09!115;UBERON:0001874!2.33e-08!1;UBERON:0003112!2.50e-08!1;UBERON:0000032!2.50e-08!1;UBERON:0005253!2.50e-08!1;UBERON:0003128!2.50e-08!1;UBERON:0002241!2.50e-08!1;UBERON:0001703!2.50e-08!1;UBERON:0004761!2.50e-08!1;UBERON:0009617!2.50e-08!1;UBERON:0002370!2.69e-08!4;UBERON:0005058!2.69e-08!4;UBERON:0009113!2.69e-08!4;UBERON:0003295!2.69e-08!4;UBERON:0005562!2.69e-08!4;UBERON:0002022!4.41e-08!1;UBERON:0007190!5.43e-08!1;UBERON:0002581!5.82e-08!1;UBERON:0000033!5.86e-08!123;UBERON:0001882!6.24e-08!1;UBERON:0005403!6.24e-08!1;UBERON:0002308!2.56e-07!9;UBERON:0002420!2.56e-07!9;UBERON:0000125!2.56e-07!9;UBERON:0007245!2.56e-07!9;UBERON:0010009!2.56e-07!9;UBERON:0010011!2.56e-07!9;UBERON:0000454!2.56e-07!9;UBERON:0000974!5.26e-07!10 | |ontology_enrichment_uberon=UBERON:0001869!3.38e-27!32;UBERON:0001893!1.60e-25!34;UBERON:0002791!4.35e-22!33;UBERON:0002020!2.11e-21!34;UBERON:0003528!2.11e-21!34;UBERON:0002780!6.55e-21!41;UBERON:0001890!6.55e-21!41;UBERON:0006240!6.55e-21!41;UBERON:0003080!2.25e-20!42;UBERON:0001950!1.58e-19!20;UBERON:0002619!9.77e-18!22;UBERON:0001049!3.10e-17!57;UBERON:0005068!3.10e-17!57;UBERON:0006241!3.10e-17!57;UBERON:0007135!3.10e-17!57;UBERON:0002616!1.40e-16!59;UBERON:0000369!7.84e-16!4;UBERON:0002435!7.84e-16!4;UBERON:0000204!7.84e-16!4;UBERON:0010082!7.84e-16!4;UBERON:0000956!1.44e-15!25;UBERON:0000203!1.44e-15!25;UBERON:0000955!1.22e-13!69;UBERON:0006238!1.22e-13!69;UBERON:0003056!1.81e-13!61;UBERON:0001017!3.78e-13!82;UBERON:0001872!9.59e-13!5;UBERON:0005743!1.98e-12!86;UBERON:0000153!9.21e-12!129;UBERON:0007811!9.21e-12!129;UBERON:0000073!4.93e-11!94;UBERON:0001016!4.93e-11!94;UBERON:0003075!1.09e-10!86;UBERON:0007284!1.09e-10!86;UBERON:0000200!1.32e-10!6;UBERON:0002346!4.08e-10!90;UBERON:0005383!4.12e-10!3;UBERON:0005382!4.12e-10!3;UBERON:0004177!8.50e-10!7;UBERON:0009663!2.82e-09!7;UBERON:0007023!6.17e-09!115;UBERON:0001874!2.33e-08!1;UBERON:0003112!2.50e-08!1;UBERON:0000032!2.50e-08!1;UBERON:0005253!2.50e-08!1;UBERON:0003128!2.50e-08!1;UBERON:0002241!2.50e-08!1;UBERON:0001703!2.50e-08!1;UBERON:0004761!2.50e-08!1;UBERON:0009617!2.50e-08!1;UBERON:0002370!2.69e-08!4;UBERON:0005058!2.69e-08!4;UBERON:0009113!2.69e-08!4;UBERON:0003295!2.69e-08!4;UBERON:0005562!2.69e-08!4;UBERON:0002022!4.41e-08!1;UBERON:0007190!5.43e-08!1;UBERON:0002581!5.82e-08!1;UBERON:0000033!5.86e-08!123;UBERON:0001882!6.24e-08!1;UBERON:0005403!6.24e-08!1;UBERON:0002308!2.56e-07!9;UBERON:0002420!2.56e-07!9;UBERON:0000125!2.56e-07!9;UBERON:0007245!2.56e-07!9;UBERON:0010009!2.56e-07!9;UBERON:0010011!2.56e-07!9;UBERON:0000454!2.56e-07!9;UBERON:0000974!5.26e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.82e-51;2!UBERON:0005058;8.82e-51;2!UBERON:0009113;8.82e-51;2!UBERON:0004177;4.92e-21;5!UBERON:0005057;4.92e-21;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;8.82e-51;2!UBERON:0005058;8.82e-51;2!UBERON:0009113;8.82e-51;2!UBERON:0004177;4.92e-21;5!UBERON:0005057;4.92e-21;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.23e-26,4;UBERON:0005058,5.23e-26,4;UBERON:0009113,5.23e-26,4;UBERON:0003295,5.23e-26,4;UBERON:0005562,5.23e-26,4;UBERON:0003351,1.03e-17,6;UBERON:0004177,2.47e-15,7;UBERON:0005057,2.47e-15,7;UBERON:0000974,4.89e-11,10;UBERON:0003408,4.89e-11,10;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30830740762312,1.77854608371035,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,32.165277098331,21.2916270034793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81783311027437,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30830740762312,1.77854608371035,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,32.165277098331,21.2916270034793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81783311027437,0 | ||
|short_description=p18@ARPP21 | |short_description=p18@ARPP21 | ||
}} | }} |
Revision as of 09:38, 17 November 2012
Short description: | p18@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_ARPP21_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 106bp_to_ENST00000449196_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | C9JQQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.23e-26 | 4 |
hemolymphoid system gland | 5.23e-26 | 4 |
thymic region | 5.23e-26 | 4 |
pharyngeal gland | 5.23e-26 | 4 |
thymus primordium | 5.23e-26 | 4 |
pharyngeal epithelium | 1.03e-17 | 6 |
hemopoietic organ | 2.47e-15 | 7 |
immune organ | 2.47e-15 | 7 |
neck | 4.89e-11 | 10 |
gland of gut | 4.89e-11 | 10 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
pharynx | 4.03e-10 | 11 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.60e-08 | 51 |
immune system cancer | 3.60e-08 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.