FFCP PHASE1:Hg19::chr2:189873796..189873815,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000680!1.18e-14!57;CL:0000056!1.18e-14!57;CL:0000355!1.18e-14!57;CL:0000187!3.14e-14!54;CL:0000183!1.22e-13!59;CL:0000393!1.29e-11!60;CL:0000211!1.29e-11!60;CL:0000057!3.06e-10!75;CL:0000192!6.96e-10!42;CL:0000514!6.96e-10!42;CL:0000048!3.05e-08!430;CL:0002570!4.06e-08!8;CL:0000723!1.13e-07!436;CL:0000034!3.20e-07!444;CL:0000359!3.90e-07!32;CL:0002494!4.25e-07!16;CL:0000136!7.83e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000680!1.18e-14!57;CL:0000056!1.18e-14!57;CL:0000355!1.18e-14!57;CL:0000187!3.14e-14!54;CL:0000183!1.22e-13!59;CL:0000393!1.29e-11!60;CL:0000211!1.29e-11!60;CL:0000057!3.06e-10!75;CL:0000192!6.96e-10!42;CL:0000514!6.96e-10!42;CL:0000048!3.05e-08!430;CL:0002570!4.06e-08!8;CL:0000723!1.13e-07!436;CL:0000034!3.20e-07!444;CL:0000359!3.90e-07!32;CL:0002494!4.25e-07!16;CL:0000136!7.83e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.12e-08;3!CL:0000388;1.12e-08;3!CL:0002504;7.60e-08;3!CL:1000279;7.60e-08;3!CL:1000280;7.60e-08;3!CL:0002615;1.48e-07;3!CL:0002579;2.84e-07;3!CL:0002580;4.04e-07;3!CL:0002570;4.35e-07;8 | |ontology_enrichment_celltype_v019=CL:0000135;1.12e-08;3!CL:0000388;1.12e-08;3!CL:0002504;7.60e-08;3!CL:1000279;7.60e-08;3!CL:1000280;7.60e-08;3!CL:0002615;1.48e-07;3!CL:0002579;2.84e-07;3!CL:0002580;4.04e-07;3!CL:0002570;4.35e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.23e-08,3;CL:0000388,1.23e-08,3;CL:0000136,1.36e-08,15;CL:0002504,6.72e-08,3;CL:1000279,6.72e-08,3;CL:1000280,6.72e-08,3;CL:0002615,1.61e-07,3;CL:0002580,2.58e-07,3;CL:0002570,3.18e-07,8;CL:0002579,3.45e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.69e-15!61;UBERON:0002036!2.69e-15!61;UBERON:0003082!2.69e-15!61;UBERON:0002385!3.46e-15!63;UBERON:0001015!3.46e-15!63;UBERON:0000383!3.46e-15!63;UBERON:0004290!2.86e-12!70;UBERON:0000914!6.09e-12!83;UBERON:0002329!6.09e-12!83;UBERON:0003077!6.09e-12!83;UBERON:0003059!6.09e-12!83;UBERON:0007282!6.09e-12!83;UBERON:0009618!6.09e-12!83;UBERON:0007285!6.09e-12!83;UBERON:0000486!2.61e-09!82;UBERON:0005256!6.33e-09!143;UBERON:0001013!1.18e-08!14;UBERON:0000478!2.16e-08!24;UBERON:0004872!6.56e-08!84;UBERON:0002100!1.79e-07!216;UBERON:0004871!2.52e-07!8;UBERON:0003688!6.75e-07!6;UBERON:0002358!6.75e-07!6;UBERON:0003684!6.75e-07!6;UBERON:0001178!6.75e-07!6 | |ontology_enrichment_uberon=UBERON:0001134!2.69e-15!61;UBERON:0002036!2.69e-15!61;UBERON:0003082!2.69e-15!61;UBERON:0002385!3.46e-15!63;UBERON:0001015!3.46e-15!63;UBERON:0000383!3.46e-15!63;UBERON:0004290!2.86e-12!70;UBERON:0000914!6.09e-12!83;UBERON:0002329!6.09e-12!83;UBERON:0003077!6.09e-12!83;UBERON:0003059!6.09e-12!83;UBERON:0007282!6.09e-12!83;UBERON:0009618!6.09e-12!83;UBERON:0007285!6.09e-12!83;UBERON:0000486!2.61e-09!82;UBERON:0005256!6.33e-09!143;UBERON:0001013!1.18e-08!14;UBERON:0000478!2.16e-08!24;UBERON:0004872!6.56e-08!84;UBERON:0002100!1.79e-07!216;UBERON:0004871!2.52e-07!8;UBERON:0003688!6.75e-07!6;UBERON:0002358!6.75e-07!6;UBERON:0003684!6.75e-07!6;UBERON:0001178!6.75e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.61e-13;6!UBERON:0002358;3.61e-13;6!UBERON:0003684;3.61e-13;6!UBERON:0001178;3.61e-13;6!UBERON:0007846;1.12e-08;3!UBERON:0000043;1.12e-08;3!UBERON:0007845;1.12e-08;3!UBERON:0004457;1.60e-08;9!UBERON:0000042;1.60e-08;9!UBERON:0001443;7.18e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.61e-13;6!UBERON:0002358;3.61e-13;6!UBERON:0003684;3.61e-13;6!UBERON:0001178;3.61e-13;6!UBERON:0007846;1.12e-08;3!UBERON:0000043;1.12e-08;3!UBERON:0007845;1.12e-08;3!UBERON:0004457;1.60e-08;9!UBERON:0000042;1.60e-08;9!UBERON:0001443;7.18e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.76e-13,6;UBERON:0002358,4.76e-13,6;UBERON:0003684,4.76e-13,6;UBERON:0001178,4.76e-13,6;UBERON:0007846,1.23e-08,3;UBERON:0000043,1.23e-08,3;UBERON:0007845,1.23e-08,3;UBERON:0001134,2.45e-07,62;UBERON:0002036,2.45e-07,62;UBERON:0003082,2.45e-07,62;UBERON:0001443,4.71e-07,11;UBERON:0002385,5.58e-07,64;UBERON:0001015,5.58e-07,64;UBERON:0000383,5.58e-07,64 | |||
|phase1_expression=1.81678379270557,2.35510576280081,2.67813367782345,3.00219895059391,1.34088328328186,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0.655324116390517,0.527533956456907,1.23766352960047,0.662794751455832,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.01210257911091,0.511450247374121,0.361439152384566,3.00802746381534,0.724232594804119,3.1811437882044,10.2193322763554,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.506522046658319,0.132409180813219,1.72101972449288,0.709336764396714,1.68203280042692,0,0.98667019366864,1.24484414159907,1.0776853765575,0.490385709340376,1.21085942115945,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0.413303124703062,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0.901428353439581,0.567160915800105,0.179389635688862,0.85422955527427,1.48352330811693,0.900273288253207,0.412210116953756,0,0.558350568994769,0.506328996723799,0.389748020644795,0.252433774244115,0.920498986422993,0.484938170456436,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0,0.387815147273333,3.57656445851882,3.381211010224,1.06375246633948,2.08014873822732,0,0,0,4.43231780340257,8.68194568626309,0,0.977208552881205,3.909311436168,0.791951872933429,0.301439377059586,0,1.19967589418468,0,0,0,1.67737398844108,1.14861935834114,0,0.434343920002738,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,0.271265023699736,4.36738809214695,1.78428988797162,1.57702415033935,0.585707074963566,1.20378439891088,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,1.98486246255021,1.53461973288062,2.24528075546459,1.66580894032411,1.02341449813341,3.53878626515936,0,0.308419387605311,0,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,1.26295892981067,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82051789532479,0.096670718292122,0.308097234229289,0.460511024178389,0,1.6113036730241,1.59518363305651,0.255679882248303,1.15741646340759,0,0,0,0,0,0.62962469366128,0.6970372701606,1.54016790088044,0,0,0.74129687641568,0.286249773483982,0.744316738719335,1.2655176988749,1.71567174531442,0,0.855877976067841,0.318203247925937,0.78494864019923,2.15846949099978,3.84351841630477,2.5918728516051,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,1.27264888758341,5.65040583101214,1.10273068709225,0,0,0,2.62357900818653,0.811641507850816,0.30982349809975,0.281695602532241,0.717056761020258,1.8667317792493,0.7133421029625,0,0,0.658589785919804,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,3.26661148915902,0.307160702099232,0,0,0,0,0,0.597743964753209,0,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.615602068030377,0.227884111694002,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,16.0515529459758,0,0,0,0,0.789168805698781,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,2.03382666702479,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,1.36310417428337,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,1.63599316893057,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.686520205190771,0.453692771289717,0.621748802331122,0.147855149989634,0,0,0.465788870628778,0.414706207840855,1.32920857278997,0,1.80309130796662,4.95046775819434,0,0.181848659202559,0.644463342254931,0,2.3885753321917,0,1.71697852591396,3.36749488765919,0,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,1.76337971845342,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,4.56579360254748,0,0,0,0,0.23248285073625,0.869291361512897,3.20684545892101,0,0.3414369541879,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,4.6392577253528,14.085618798715,0,0,0.237840181555137,0,0,0,0,1.529916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| ||
|short_description=p12@COL3A1 | |short_description=p12@COL3A1 | ||
}} | }} |
Revision as of 19:46, 18 November 2012
Short description: | p12@COL3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_COL3A1_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | 83bp_to_X01742_5end |
EntrezGene: | COL3A1 |
HGNC: | 2201 |
UniProt: | P02461Q6LBY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.23e-08 | 3 |
tendon cell | 1.23e-08 | 3 |
fat cell | 1.36e-08 | 15 |
enteric smooth muscle cell | 6.72e-08 | 3 |
smooth muscle cell of large intestine | 6.72e-08 | 3 |
smooth muscle cell of colon | 6.72e-08 | 3 |
adipocyte of omentum tissue | 1.61e-07 | 3 |
preadipocyte of the breast | 2.58e-07 | 3 |
mesenchymal stem cell of adipose | 3.18e-07 | 8 |
omentum preadipocyte | 3.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.76e-13 | 6 |
peritoneum | 4.76e-13 | 6 |
abdominal cavity | 4.76e-13 | 6 |
visceral peritoneum | 4.76e-13 | 6 |
dense regular connective tissue | 1.23e-08 | 3 |
tendon | 1.23e-08 | 3 |
regular connective tissue | 1.23e-08 | 3 |
skeletal muscle tissue | 2.45e-07 | 62 |
striated muscle tissue | 2.45e-07 | 62 |
myotome | 2.45e-07 | 62 |
chest | 4.71e-07 | 11 |
muscle tissue | 5.58e-07 | 64 |
musculature | 5.58e-07 | 64 |
musculature of body | 5.58e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.