FFCP PHASE1:Hg19::chr4:16077817..16077824,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!5.69e-22!7;CL:0000586!5.69e-22!7;CL:0002322!4.39e-14!5;CL:0000148!1.67e-07!10;CL:0000541!1.67e-07!10 | |ontology_enrichment_celltype=CL:0000039!5.69e-22!7;CL:0000586!5.69e-22!7;CL:0002322!4.39e-14!5;CL:0000148!1.67e-07!10;CL:0000541!1.67e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.74e-12;6!CL:0002255;2.74e-12;6 | |ontology_enrichment_celltype_v019=CL:0002149;2.74e-12;6!CL:0002255;2.74e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.93e-23;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.93e-23;3 | ||
|ontology_enrichment_disease=DOID:3095!2.07e-07!22;DOID:2994!2.07e-07!22 | |ontology_enrichment_disease=DOID:3095!2.07e-07!22;DOID:2994!2.07e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3001;2.74e-12;6 | |ontology_enrichment_disease_v019=DOID:3001;2.74e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.57e-19!8;UBERON:0000966!2.25e-14!5;UBERON:0005388!2.25e-14!5;UBERON:0001802!2.25e-14!5;UBERON:0003135!3.08e-14!11;UBERON:0003127!2.02e-09!2;UBERON:0000970!3.49e-08!20;UBERON:0002104!8.08e-08!21;UBERON:0000991!9.73e-08!21;UBERON:0009196!9.73e-08!21;UBERON:0009117!9.73e-08!21;UBERON:0005564!9.73e-08!21;UBERON:0004176!2.07e-07!22;UBERON:0003101!2.07e-07!22;UBERON:0000079!2.07e-07!22;UBERON:0000020!3.48e-07!23;UBERON:0001032!6.61e-07!24;UBERON:0004456!6.61e-07!24;UBERON:0002771!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0000473!2.57e-19!8;UBERON:0000966!2.25e-14!5;UBERON:0005388!2.25e-14!5;UBERON:0001802!2.25e-14!5;UBERON:0003135!3.08e-14!11;UBERON:0003127!2.02e-09!2;UBERON:0000970!3.49e-08!20;UBERON:0002104!8.08e-08!21;UBERON:0000991!9.73e-08!21;UBERON:0009196!9.73e-08!21;UBERON:0009117!9.73e-08!21;UBERON:0005564!9.73e-08!21;UBERON:0004176!2.07e-07!22;UBERON:0003101!2.07e-07!22;UBERON:0000079!2.07e-07!22;UBERON:0000020!3.48e-07!23;UBERON:0001032!6.61e-07!24;UBERON:0004456!6.61e-07!24;UBERON:0002771!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24 | |ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24 | |||
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|short_description=p19@PROM1 | |short_description=p19@PROM1 | ||
}} | }} |
Revision as of 01:38, 19 November 2012
Short description: | p19@PROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_PROM1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -76bp_to_ENST00000447510, ENST00000539194, ENST00000540805, NM_001145849, NM_001145850, NM_001145851, NM_001145852, NM_006017, uc003goo.2, uc003gor.2, uc003gos.2, uc003got.2, uc003gou.2, uc010iec.1_5end |
EntrezGene: | PROM1 |
HGNC: | 9454 |
UniProt: | O43490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.74e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.