FFCP PHASE1:Hg19::chr3:29322542..29322572,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.76e-16!180;CL:0000057!7.01e-16!75;CL:0000222!5.76e-09!119;CL:0002620!1.92e-07!23;CL:0000680!9.62e-07!57;CL:0000056!9.62e-07!57;CL:0000355!9.62e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.76e-16!180;CL:0000057!7.01e-16!75;CL:0000222!5.76e-09!119;CL:0002620!1.92e-07!23;CL:0000680!9.62e-07!57;CL:0000056!9.62e-07!57;CL:0000355!9.62e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.38e-08;23!CL:0000057;6.71e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;4.38e-08;23!CL:0000057;6.71e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.45e-16,76;CL:0000222,2.80e-08,121;CL:0002620,6.94e-08,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.51e-15!365;UBERON:0000481!6.11e-13!347;UBERON:0000477!2.13e-10!286;UBERON:0000483!2.36e-10!309;UBERON:0000119!2.38e-10!312;UBERON:0000468!2.44e-10!659;UBERON:0005256!2.45e-09!143;UBERON:0000914!2.96e-09!83;UBERON:0002329!2.96e-09!83;UBERON:0003077!2.96e-09!83;UBERON:0003059!2.96e-09!83;UBERON:0007282!2.96e-09!83;UBERON:0009618!2.96e-09!83;UBERON:0007285!2.96e-09!83;UBERON:0002100!3.47e-09!216;UBERON:0002385!1.49e-08!63;UBERON:0001015!1.49e-08!63;UBERON:0000383!1.49e-08!63;UBERON:0000467!3.05e-08!625;UBERON:0001134!4.51e-08!61;UBERON:0002036!4.51e-08!61;UBERON:0003082!4.51e-08!61;UBERON:0000480!4.90e-08!626;UBERON:0004290!5.64e-08!70;UBERON:0000486!7.52e-08!82;UBERON:0004872!9.77e-08!84;UBERON:0004111!1.83e-07!241;UBERON:0003104!2.97e-07!238;UBERON:0009142!2.97e-07!238;UBERON:0003102!4.57e-07!95 | |ontology_enrichment_uberon=UBERON:0000475!2.51e-15!365;UBERON:0000481!6.11e-13!347;UBERON:0000477!2.13e-10!286;UBERON:0000483!2.36e-10!309;UBERON:0000119!2.38e-10!312;UBERON:0000468!2.44e-10!659;UBERON:0005256!2.45e-09!143;UBERON:0000914!2.96e-09!83;UBERON:0002329!2.96e-09!83;UBERON:0003077!2.96e-09!83;UBERON:0003059!2.96e-09!83;UBERON:0007282!2.96e-09!83;UBERON:0009618!2.96e-09!83;UBERON:0007285!2.96e-09!83;UBERON:0002100!3.47e-09!216;UBERON:0002385!1.49e-08!63;UBERON:0001015!1.49e-08!63;UBERON:0000383!1.49e-08!63;UBERON:0000467!3.05e-08!625;UBERON:0001134!4.51e-08!61;UBERON:0002036!4.51e-08!61;UBERON:0003082!4.51e-08!61;UBERON:0000480!4.90e-08!626;UBERON:0004290!5.64e-08!70;UBERON:0000486!7.52e-08!82;UBERON:0004872!9.77e-08!84;UBERON:0004111!1.83e-07!241;UBERON:0003104!2.97e-07!238;UBERON:0009142!2.97e-07!238;UBERON:0003102!4.57e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.07e-08;31!UBERON:0001015;2.07e-08;31!UBERON:0000383;2.07e-08;31 | |ontology_enrichment_uberon_v019=UBERON:0002385;2.07e-08;31!UBERON:0001015;2.07e-08;31!UBERON:0000383;2.07e-08;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.13e-08,122;UBERON:0002385,4.76e-08,64;UBERON:0001015,4.76e-08,64;UBERON:0000383,4.76e-08,64;UBERON:0003104,7.54e-08,160;UBERON:0009142,7.54e-08,160;UBERON:0007524,8.58e-08,73;UBERON:0001134,1.48e-07,62;UBERON:0002036,1.48e-07,62;UBERON:0003082,1.48e-07,62;UBERON:0002329,1.59e-07,71;UBERON:0003059,1.59e-07,71;UBERON:0007282,1.59e-07,71;UBERON:0004290,1.59e-07,71;UBERON:0009618,1.59e-07,71;UBERON:0007503,1.79e-07,78;UBERON:0003077,2.04e-07,72;UBERON:0007285,2.04e-07,72;UBERON:0000486,8.33e-07,83 | |||
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| ||
|short_description=p1@RBMS3 | |short_description=p1@RBMS3 | ||
}} | }} |
Revision as of 03:10, 19 November 2012
Short description: | p1@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RBMS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471426_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.45e-16 | 76 |
mesodermal cell | 2.80e-08 | 121 |
skin fibroblast | 6.94e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 2.13e-08 | 122 |
muscle tissue | 4.76e-08 | 64 |
musculature | 4.76e-08 | 64 |
musculature of body | 4.76e-08 | 64 |
mesenchyme | 7.54e-08 | 160 |
entire embryonic mesenchyme | 7.54e-08 | 160 |
dense mesenchyme tissue | 8.58e-08 | 73 |
skeletal muscle tissue | 1.48e-07 | 62 |
striated muscle tissue | 1.48e-07 | 62 |
myotome | 1.48e-07 | 62 |
somite | 1.59e-07 | 71 |
presomitic mesoderm | 1.59e-07 | 71 |
presumptive segmental plate | 1.59e-07 | 71 |
dermomyotome | 1.59e-07 | 71 |
trunk paraxial mesoderm | 1.59e-07 | 71 |
epithelial vesicle | 1.79e-07 | 78 |
paraxial mesoderm | 2.04e-07 | 72 |
presumptive paraxial mesoderm | 2.04e-07 | 72 |
multilaminar epithelium | 8.33e-07 | 83 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.