FFCP PHASE1:Hg19::chr3:119379772..119379779,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.48e-30;1!UBERON:0010227;9.98e-30;1!UBERON:0010226;2.37e-29;1 | |ontology_enrichment_development_v019=UBERON:0004140;7.48e-30;1!UBERON:0010227;9.98e-30;1!UBERON:0010226;2.37e-29;1 | ||
|ontology_enrichment_disease=DOID:178!2.04e-09!1;DOID:326!2.04e-09!1;DOID:3978!2.04e-09!1;DOID:3394!2.04e-09!1;DOID:5844!2.04e-09!1 | |ontology_enrichment_disease=DOID:178!2.04e-09!1;DOID:326!2.04e-09!1;DOID:3978!2.04e-09!1;DOID:3394!2.04e-09!1;DOID:5844!2.04e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:178;2.37e-29;1!DOID:326;2.37e-29;1!DOID:3978;2.37e-29;1!DOID:3394;2.37e-29;1!DOID:5844;2.37e-29;1!DOID:114;2.05e-15;2!DOID:1287;2.26e-08;4 | |ontology_enrichment_disease_v019=DOID:178;2.37e-29;1!DOID:326;2.37e-29;1!DOID:3978;2.37e-29;1!DOID:3394;2.37e-29;1!DOID:5844;2.37e-29;1!DOID:114;2.05e-15;2!DOID:1287;2.26e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:178,1.78e-29,1;DOID:326,1.78e-29,1;DOID:3978,1.78e-29,1;DOID:3394,1.78e-29,1;DOID:5844,1.78e-29,1;DOID:114,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.52e-24!3;UBERON:0003978!4.58e-24!3;UBERON:0009751!4.58e-24!3;UBERON:0000946!4.58e-24!3;UBERON:0002523!4.58e-24!3;UBERON:0005983!4.58e-24!3;UBERON:0002165!4.58e-24!3;UBERON:0002062!4.58e-24!3;UBERON:0007280!4.58e-24!3;UBERON:0007100!2.23e-22!27;UBERON:0002081!7.30e-17!2;UBERON:0002133!1.48e-16!2;UBERON:0007023!2.47e-16!115;UBERON:0000948!2.41e-15!24;UBERON:0005498!2.41e-15!24;UBERON:0004140!2.41e-15!24;UBERON:0009881!2.41e-15!24;UBERON:0004141!2.41e-15!24;UBERON:0003084!2.41e-15!24;UBERON:0007005!2.41e-15!24;UBERON:0004139!2.41e-15!24;UBERON:0004291!2.41e-15!24;UBERON:0003103!3.53e-14!69;UBERON:0002079!1.74e-09!1;UBERON:0002084!1.89e-09!1;UBERON:0002082!1.89e-09!1;UBERON:0004706!1.89e-09!1;UBERON:0002146!2.82e-09!1;UBERON:0005623!2.82e-09!1;UBERON:0002135!3.58e-09!1;UBERON:0001000!3.88e-09!1;UBERON:0005352!3.88e-09!1;UBERON:0002134!4.19e-09!1;UBERON:0005208!4.19e-09!1;UBERON:0005946!4.19e-09!1;UBERON:0005965!4.19e-09!1;UBERON:0002078!4.19e-09!1;UBERON:0005418!4.54e-09!1;UBERON:0001389!4.54e-09!1;UBERON:0000026!4.54e-09!1;UBERON:0008784!4.54e-09!1;UBERON:0006058!4.54e-09!1;UBERON:0003663!4.54e-09!1;UBERON:0001383!4.54e-09!1;UBERON:0004256!4.54e-09!1;UBERON:0002529!4.54e-09!1;UBERON:0004708!4.54e-09!1;UBERON:0002101!4.54e-09!1;UBERON:0004709!4.54e-09!1;UBERON:0003661!4.54e-09!1;UBERON:0002471!4.54e-09!1;UBERON:0004357!4.54e-09!1;UBERON:0009872!4.54e-09!1;UBERON:0004347!4.54e-09!1;UBERON:0005420!4.54e-09!1;UBERON:0005732!4.54e-09!1;UBERON:0006057!4.54e-09!1;UBERON:0000978!4.54e-09!1;UBERON:0002103!4.54e-09!1;UBERON:0001665!4.54e-09!1;UBERON:0003823!4.54e-09!1;UBERON:0000154!4.54e-09!1;UBERON:0005733!4.54e-09!1;UBERON:0005730!4.54e-09!1 | |ontology_enrichment_uberon=UBERON:0004151!1.52e-24!3;UBERON:0003978!4.58e-24!3;UBERON:0009751!4.58e-24!3;UBERON:0000946!4.58e-24!3;UBERON:0002523!4.58e-24!3;UBERON:0005983!4.58e-24!3;UBERON:0002165!4.58e-24!3;UBERON:0002062!4.58e-24!3;UBERON:0007280!4.58e-24!3;UBERON:0007100!2.23e-22!27;UBERON:0002081!7.30e-17!2;UBERON:0002133!1.48e-16!2;UBERON:0007023!2.47e-16!115;UBERON:0000948!2.41e-15!24;UBERON:0005498!2.41e-15!24;UBERON:0004140!2.41e-15!24;UBERON:0009881!2.41e-15!24;UBERON:0004141!2.41e-15!24;UBERON:0003084!2.41e-15!24;UBERON:0007005!2.41e-15!24;UBERON:0004139!2.41e-15!24;UBERON:0004291!2.41e-15!24;UBERON:0003103!3.53e-14!69;UBERON:0002079!1.74e-09!1;UBERON:0002084!1.89e-09!1;UBERON:0002082!1.89e-09!1;UBERON:0004706!1.89e-09!1;UBERON:0002146!2.82e-09!1;UBERON:0005623!2.82e-09!1;UBERON:0002135!3.58e-09!1;UBERON:0001000!3.88e-09!1;UBERON:0005352!3.88e-09!1;UBERON:0002134!4.19e-09!1;UBERON:0005208!4.19e-09!1;UBERON:0005946!4.19e-09!1;UBERON:0005965!4.19e-09!1;UBERON:0002078!4.19e-09!1;UBERON:0005418!4.54e-09!1;UBERON:0001389!4.54e-09!1;UBERON:0000026!4.54e-09!1;UBERON:0008784!4.54e-09!1;UBERON:0006058!4.54e-09!1;UBERON:0003663!4.54e-09!1;UBERON:0001383!4.54e-09!1;UBERON:0004256!4.54e-09!1;UBERON:0002529!4.54e-09!1;UBERON:0004708!4.54e-09!1;UBERON:0002101!4.54e-09!1;UBERON:0004709!4.54e-09!1;UBERON:0003661!4.54e-09!1;UBERON:0002471!4.54e-09!1;UBERON:0004357!4.54e-09!1;UBERON:0009872!4.54e-09!1;UBERON:0004347!4.54e-09!1;UBERON:0005420!4.54e-09!1;UBERON:0005732!4.54e-09!1;UBERON:0006057!4.54e-09!1;UBERON:0000978!4.54e-09!1;UBERON:0002103!4.54e-09!1;UBERON:0001665!4.54e-09!1;UBERON:0003823!4.54e-09!1;UBERON:0000154!4.54e-09!1;UBERON:0005733!4.54e-09!1;UBERON:0005730!4.54e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.49e-38;3!UBERON:0002079;9.98e-30;1!UBERON:0002084;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0007100;1.43e-28;25!UBERON:0002081;1.33e-15;2!UBERON:0001255;2.05e-15;2!UBERON:0001556;2.05e-15;2!UBERON:0000948;2.26e-12;22!UBERON:0003103;3.65e-08;61 | |ontology_enrichment_uberon_v019=UBERON:0004151;1.49e-38;3!UBERON:0002079;9.98e-30;1!UBERON:0002084;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0007100;1.43e-28;25!UBERON:0002081;1.33e-15;2!UBERON:0001255;2.05e-15;2!UBERON:0001556;2.05e-15;2!UBERON:0000948;2.26e-12;22!UBERON:0003103;3.65e-08;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.01e-38,3;UBERON:0002079,9.99e-30,1;UBERON:0002084,1.33e-29,1;UBERON:0002082,1.33e-29,1;UBERON:0010226,1.33e-29,1;UBERON:0007100,1.45e-26,27;UBERON:0002081,1.33e-15,2;UBERON:0010227,1.33e-15,2;UBERON:0001255,2.74e-15,2;UBERON:0001556,2.74e-15,2;UBERON:0003103,3.04e-15,68;UBERON:0000948,1.97e-11,24;UBERON:0005498,1.97e-11,24;UBERON:0004140,1.97e-11,24;UBERON:0009881,1.97e-11,24;UBERON:0004141,1.97e-11,24;UBERON:0003084,1.97e-11,24;UBERON:0007005,1.97e-11,24;UBERON:0004139,1.97e-11,24;UBERON:0004291,1.97e-11,24;UBERON:0007023,3.77e-09,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0.717873024576814,1.39775300349294,0,1.33902874465124,10.0775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,2.85878130549347,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0.717873024576814,1.39775300349294,0,1.33902874465124,10.0775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,2.85878130549347,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@POPDC2 | |short_description=p3@POPDC2 | ||
}} | }} |
Revision as of 06:07, 19 November 2012
Short description: | p3@POPDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_POPDC2_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -42bp_to_ENST00000493094_5end |
EntrezGene: | POPDC2 |
HGNC: | 17648 |
UniProt: | C9J3P7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.01e-38 | 3 |
left cardiac atrium | 9.99e-30 | 1 |
heart left ventricle | 1.33e-29 | 1 |
cardiac ventricle | 1.33e-29 | 1 |
future cardiac ventricle | 1.33e-29 | 1 |
primary circulatory organ | 1.45e-26 | 27 |
cardiac atrium | 1.33e-15 | 2 |
future cardiac atrium | 1.33e-15 | 2 |
urinary bladder | 2.74e-15 | 2 |
lower urinary tract | 2.74e-15 | 2 |
compound organ | 3.04e-15 | 68 |
heart | 1.97e-11 | 24 |
primitive heart tube | 1.97e-11 | 24 |
primary heart field | 1.97e-11 | 24 |
anterior lateral plate mesoderm | 1.97e-11 | 24 |
heart tube | 1.97e-11 | 24 |
heart primordium | 1.97e-11 | 24 |
cardiac mesoderm | 1.97e-11 | 24 |
cardiogenic plate | 1.97e-11 | 24 |
heart rudiment | 1.97e-11 | 24 |
adult organism | 3.77e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.78e-29 | 1 |
ischemia | 1.78e-29 | 1 |
extrinsic cardiomyopathy | 1.78e-29 | 1 |
myocardial ischemia | 1.78e-29 | 1 |
myocardial infarction | 1.78e-29 | 1 |
heart disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.