FFCP PHASE1:Hg19::chr15:39888386..39888393,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002371!2.14e-15!591;CL:0000057!1.08e-14!75;CL:0000144!2.33e-13!625;CL:0002139!2.71e-12!24;CL:0000548!1.20e-10!679;CL:0000004!1.20e-10!679;CL:0000255!1.20e-10!679;CL:0000012!2.57e-10!682;CL:0000115!3.14e-10!35;CL:0000055!3.88e-10!180;CL:0002078!2.30e-09!44;CL:0000063!9.30e-09!578;CL:0000071!1.58e-08!18;CL:0002546!1.58e-08!18;CL:0000222!5.05e-08!119;CL:0000213!2.00e-07!57;CL:0000215!2.00e-07!57;CL:0002334!3.76e-07!12 | |ontology_enrichment_celltype=CL:0002371!2.14e-15!591;CL:0000057!1.08e-14!75;CL:0000144!2.33e-13!625;CL:0002139!2.71e-12!24;CL:0000548!1.20e-10!679;CL:0000004!1.20e-10!679;CL:0000255!1.20e-10!679;CL:0000012!2.57e-10!682;CL:0000115!3.14e-10!35;CL:0000055!3.88e-10!180;CL:0002078!2.30e-09!44;CL:0000063!9.30e-09!578;CL:0000071!1.58e-08!18;CL:0002546!1.58e-08!18;CL:0000222!5.05e-08!119;CL:0000213!2.00e-07!57;CL:0000215!2.00e-07!57;CL:0002334!3.76e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.58e-11;12!CL:0002580;3.73e-10;3!CL:0002579;1.60e-09;3!CL:0002615;2.45e-09;3!CL:0002537;5.32e-09;5!CL:0000057;6.49e-09;73!CL:0002559;1.05e-08;5!CL:0000346;1.43e-08;3!CL:1000428;1.43e-08;3!CL:0000197;3.31e-08;6!CL:0000098;3.31e-08;6!CL:0002167;3.31e-08;6!CL:0002620;7.67e-08;23!CL:0000136;1.64e-07;13!CL:0002617;7.35e-07;2 | |ontology_enrichment_celltype_v019=CL:0002334;1.58e-11;12!CL:0002580;3.73e-10;3!CL:0002579;1.60e-09;3!CL:0002615;2.45e-09;3!CL:0002537;5.32e-09;5!CL:0000057;6.49e-09;73!CL:0002559;1.05e-08;5!CL:0000346;1.43e-08;3!CL:1000428;1.43e-08;3!CL:0000197;3.31e-08;6!CL:0000098;3.31e-08;6!CL:0002167;3.31e-08;6!CL:0002620;7.67e-08;23!CL:0000136;1.64e-07;13!CL:0002617;7.35e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.77e-19,76;CL:0002334,1.44e-11,12;CL:0002580,3.72e-10,3;CL:0002579,1.69e-09,3;CL:0002615,2.82e-09,3;CL:0002559,3.57e-09,5;CL:0000346,5.98e-09,3;CL:1000428,5.98e-09,3;CL:0002537,1.08e-08,5;CL:0000197,1.98e-08,6;CL:0000098,1.98e-08,6;CL:0002167,1.98e-08,6;CL:0002620,7.71e-08,23;CL:0002617,3.90e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.64e-12!69;UBERON:0002049!1.34e-11!79;UBERON:0007798!1.34e-11!79;UBERON:0001981!1.20e-10!60;UBERON:0007500!1.20e-10!60;UBERON:0004537!1.20e-10!60;UBERON:0006965!1.20e-10!60;UBERON:0004872!1.06e-09!84;UBERON:0004535!3.03e-09!110;UBERON:0001009!4.87e-09!113;UBERON:0001986!1.58e-08!18;UBERON:0004638!1.58e-08!18;UBERON:0004852!1.58e-08!18;UBERON:0001637!1.51e-07!42;UBERON:0003509!1.51e-07!42;UBERON:0004572!1.51e-07!42;UBERON:0000468!3.33e-07!659;UBERON:0003688!3.56e-07!6;UBERON:0002358!3.56e-07!6;UBERON:0003684!3.56e-07!6;UBERON:0001178!3.56e-07!6;UBERON:0003914!3.58e-07!118;UBERON:0000487!5.44e-07!22 | |ontology_enrichment_uberon=UBERON:0000055!1.64e-12!69;UBERON:0002049!1.34e-11!79;UBERON:0007798!1.34e-11!79;UBERON:0001981!1.20e-10!60;UBERON:0007500!1.20e-10!60;UBERON:0004537!1.20e-10!60;UBERON:0006965!1.20e-10!60;UBERON:0004872!1.06e-09!84;UBERON:0004535!3.03e-09!110;UBERON:0001009!4.87e-09!113;UBERON:0001986!1.58e-08!18;UBERON:0004638!1.58e-08!18;UBERON:0004852!1.58e-08!18;UBERON:0001637!1.51e-07!42;UBERON:0003509!1.51e-07!42;UBERON:0004572!1.51e-07!42;UBERON:0000468!3.33e-07!659;UBERON:0003688!3.56e-07!6;UBERON:0002358!3.56e-07!6;UBERON:0003684!3.56e-07!6;UBERON:0001178!3.56e-07!6;UBERON:0003914!3.58e-07!118;UBERON:0000487!5.44e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.74e-17;6!UBERON:0002358;3.74e-17;6!UBERON:0003684;3.74e-17;6!UBERON:0001178;3.74e-17;6!UBERON:0004457;3.56e-11;9!UBERON:0000042;3.56e-11;9!UBERON:0002073;1.05e-08;5!UBERON:0000412;1.43e-08;3!UBERON:0001992;1.43e-08;3!UBERON:0000310;1.98e-07;10!UBERON:0005406;4.89e-07;2!UBERON:0002097;6.83e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.74e-17;6!UBERON:0002358;3.74e-17;6!UBERON:0003684;3.74e-17;6!UBERON:0001178;3.74e-17;6!UBERON:0004457;3.56e-11;9!UBERON:0000042;3.56e-11;9!UBERON:0002073;1.05e-08;5!UBERON:0000412;1.43e-08;3!UBERON:0001992;1.43e-08;3!UBERON:0000310;1.98e-07;10!UBERON:0005406;4.89e-07;2!UBERON:0002097;6.83e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.53e-17,6;UBERON:0002358,4.53e-17,6;UBERON:0003684,4.53e-17,6;UBERON:0001178,4.53e-17,6;UBERON:0002073,3.57e-09,5;UBERON:0005086,3.57e-09,5;UBERON:0000412,5.98e-09,3;UBERON:0001992,5.98e-09,3;UBERON:0002097,3.14e-08,41;UBERON:0004457,3.80e-08,12;UBERON:0000042,3.80e-08,12;UBERON:0004923,7.81e-08,66;UBERON:0000310,1.47e-07,10;UBERON:0005406,3.79e-07,2;UBERON:0002199,4.90e-07,46;UBERON:0002416,4.90e-07,46;UBERON:0001443,7.90e-07,11 | |||
|phase1_expression=1.99846217197612,6.63711624062048,2.67813367782345,2.00146596706261,1.34088328328186,2.61701557230111,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,2.6893005858071,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0,0.242584061187816,0.697287110717054,0,0,0.863077176966451,0.256160706529101,0,0.344745680736619,0,0,0.752969358170419,0,0.898893937780338,0.612167784741805,0.641858054152187,0,0.329851300186716,0,0,2.90209238628584,0,0,1.25624332628372,0.521482918420201,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.596287222100115,0,1.73570250803797,0,0.419499436209906,0.825354125820202,1.04497483268405,0.775250277507987,0.35576626268671,0.66944122552934,0.402829317109147,0.760272105718513,1.22031028774085,0.735326160691737,1.62028389576352,0.892997282840798,0.22452937262617,0,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,4.96971951695318,1.01304409331664,0.397227542439656,1.14734648299525,0.354668382198357,0.560677600142307,1.06748995729705,1.2333377420858,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,2.37600571456411,1.48360157567134,0,0,0,0,0,0.438977620880838,2.45190236639216,1.20190447125277,0.794025282120147,1.79389635688862,2.77624605464138,1.69545520927649,0.900273288253207,0.618315175430633,1.03056216018252,1.11670113798954,1.68776332241266,0.0974370051611986,1.26216887122057,1.28869858099219,0,0.710019185033229,0.503760491138201,1.18692414617341,0,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,1.85747171212792,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0.370353780634118,0,1.03993478527958,0,0,0,0.577465791044295,3.24089858803628,0.761016608938393,0,0,0,0,0,1.87467667973554,0.839910640994298,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,2.9115920614313,4.81758269752337,3.46945313074656,1.87426263988341,0.902838299183157,2.27407504055985,0,0.664225598535437,0.184369168541703,0.781952530212746,0,0,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0,2.48107807818777,6.75232682467475,4.77122160536225,2.17836553734692,1.53512174720011,4.50390979202101,2.96836132889982,0.771048469013278,0.177561725313127,0,0,0.116210378459959,0,1.20303882181971,0,0.459257792658427,0.182091168006717,0.524497659837696,0,0,0,0,0,1.13733384070897,0.850468526382578,0.647747748306418,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0.330569830721956,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0.74129687641568,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0,0.78494864019923,0.539617372749944,0,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0,0.565621727814851,0,0,0,2.19225442626881,0,0,0.202910376962704,1.239293992399,0,0,0.196498082026242,1.07001315444375,0,0.211107635297664,0,0,0.349934720244983,0.192444225451024,0.670302275535787,0,0,0,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,2.45728561679386,0,0,0.222617410045812,0,0,0,0,0,0,0,0.933118762985422,0.629078458031288,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0.261177619741208,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0.199679000498991,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.300515217994437,0.380805212168795,0.406870733204662,0.363697318405119,0.107410557042488,0.464033759878494,2.3885753321917,1.20008329398946,0,0.673498977531838,0,0.192619830407303,0,0,0.453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| ||
|short_description=p@chr15:39888386..39888393,+ | |short_description=p@chr15:39888386..39888393,+ | ||
}} | }} |
Revision as of 08:07, 19 November 2012
Short description: | p@chr15:39888386..39888393, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39888386..39888393, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.77e-19 | 76 |
preadipocyte | 1.44e-11 | 12 |
preadipocyte of the breast | 3.72e-10 | 3 |
omentum preadipocyte | 1.69e-09 | 3 |
adipocyte of omentum tissue | 2.82e-09 | 3 |
hair follicle cell | 3.57e-09 | 5 |
hair follicle dermal papilla cell | 5.98e-09 | 3 |
stem cell of epidermis | 5.98e-09 | 3 |
amnion mesenchymal stem cell | 1.08e-08 | 5 |
receptor cell | 1.98e-08 | 6 |
sensory epithelial cell | 1.98e-08 | 6 |
olfactory epithelial cell | 1.98e-08 | 6 |
skin fibroblast | 7.71e-08 | 23 |
adipocyte of breast | 3.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.53e-17 | 6 |
peritoneum | 4.53e-17 | 6 |
abdominal cavity | 4.53e-17 | 6 |
visceral peritoneum | 4.53e-17 | 6 |
hair follicle | 3.57e-09 | 5 |
hair follicle placode | 3.57e-09 | 5 |
dermal papilla | 5.98e-09 | 3 |
papillary layer of dermis | 5.98e-09 | 3 |
skin of body | 3.14e-08 | 41 |
cavity lining | 3.80e-08 | 12 |
serous membrane | 3.80e-08 | 12 |
organ component layer | 7.81e-08 | 66 |
breast | 1.47e-07 | 10 |
perirenal fat | 3.79e-07 | 2 |
integument | 4.90e-07 | 46 |
integumental system | 4.90e-07 | 46 |
chest | 7.90e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.