FFCP PHASE1:Hg19::chr15:48703363..48703377,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.44e-28!180;CL:0000057!3.94e-24!75;CL:0000048!1.53e-11!430;CL:0002620!4.30e-11!23;CL:0000723!6.69e-11!436;CL:0000034!8.96e-10!444;CL:0000680!9.99e-10!57;CL:0000056!9.99e-10!57;CL:0000355!9.99e-10!57;CL:0002334!1.14e-09!12;CL:0000499!4.10e-09!27;CL:0000144!4.70e-09!625;CL:0002371!7.90e-09!591;CL:0000187!1.82e-08!54;CL:0000183!7.85e-08!59;CL:0000393!1.96e-07!60;CL:0000211!1.96e-07!60;CL:0000192!5.14e-07!42;CL:0000514!5.14e-07!42 | |ontology_enrichment_celltype=CL:0000055!6.44e-28!180;CL:0000057!3.94e-24!75;CL:0000048!1.53e-11!430;CL:0002620!4.30e-11!23;CL:0000723!6.69e-11!436;CL:0000034!8.96e-10!444;CL:0000680!9.99e-10!57;CL:0000056!9.99e-10!57;CL:0000355!9.99e-10!57;CL:0002334!1.14e-09!12;CL:0000499!4.10e-09!27;CL:0000144!4.70e-09!625;CL:0002371!7.90e-09!591;CL:0000187!1.82e-08!54;CL:0000183!7.85e-08!59;CL:0000393!1.96e-07!60;CL:0000211!1.96e-07!60;CL:0000192!5.14e-07!42;CL:0000514!5.14e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.78e-14;12!CL:0000134;1.28e-12;55!CL:0002620;2.04e-11;23!CL:0000723;2.59e-11;61!CL:0000048;1.35e-10;58!CL:0000057;9.48e-10;73!CL:0000349;1.12e-09;19!CL:0000034;8.13e-09;69!CL:0002320;1.24e-08;188!CL:0000499;3.23e-08;28!CL:0000153;1.20e-07;9!CL:0000447;1.20e-07;9 | |ontology_enrichment_celltype_v019=CL:0002334;1.78e-14;12!CL:0000134;1.28e-12;55!CL:0002620;2.04e-11;23!CL:0000723;2.59e-11;61!CL:0000048;1.35e-10;58!CL:0000057;9.48e-10;73!CL:0000349;1.12e-09;19!CL:0000034;8.13e-09;69!CL:0002320;1.24e-08;188!CL:0000499;3.23e-08;28!CL:0000153;1.20e-07;9!CL:0000447;1.20e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.54e-25,76;CL:0000048,8.90e-19,427;CL:0000723,5.06e-18,433;CL:0000034,4.73e-17,441;CL:0002334,1.33e-14,12;CL:0002320,8.43e-13,361;CL:0000134,1.08e-12,354;CL:0002620,1.73e-11,23;CL:0000219,4.28e-10,386;CL:0000349,1.17e-09,19;CL:0000499,3.19e-08,28;CL:0000153,1.35e-07,9;CL:0000447,1.35e-07,9;CL:0000680,8.01e-07,58;CL:0000056,8.01e-07,58;CL:0000355,8.01e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.06e-07;5!DOID:450;1.06e-07;5!DOID:66;1.06e-07;5!DOID:423;1.06e-07;5!DOID:0080000;1.06e-07;5!DOID:11722;1.06e-07;5!DOID:2394;3.18e-07;14 | |ontology_enrichment_disease_v019=DOID:17;1.06e-07;5!DOID:450;1.06e-07;5!DOID:66;1.06e-07;5!DOID:423;1.06e-07;5!DOID:0080000;1.06e-07;5!DOID:11722;1.06e-07;5!DOID:2394;3.18e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.09e-07,5;DOID:450,1.09e-07,5;DOID:66,1.09e-07,5;DOID:423,1.09e-07,5;DOID:0080000,1.09e-07,5;DOID:11722,1.09e-07,5;DOID:2394,3.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.43e-11!83;UBERON:0002329!2.43e-11!83;UBERON:0003077!2.43e-11!83;UBERON:0003059!2.43e-11!83;UBERON:0007282!2.43e-11!83;UBERON:0009618!2.43e-11!83;UBERON:0007285!2.43e-11!83;UBERON:0004290!4.39e-10!70;UBERON:0001134!1.22e-09!61;UBERON:0002036!1.22e-09!61;UBERON:0003082!1.22e-09!61;UBERON:0002385!2.08e-09!63;UBERON:0001015!2.08e-09!63;UBERON:0000383!2.08e-09!63;UBERON:0005256!3.77e-09!143;UBERON:0004872!7.46e-09!84;UBERON:0000486!8.72e-09!82;UBERON:0004923!1.25e-08!57;UBERON:0005631!2.30e-08!14;UBERON:0000158!2.30e-08!14;UBERON:0002199!4.78e-08!45;UBERON:0002416!4.78e-08!45;UBERON:0004573!6.78e-07!33;UBERON:0004571!6.78e-07!33;UBERON:0002384!8.93e-07!375 | |ontology_enrichment_uberon=UBERON:0000914!2.43e-11!83;UBERON:0002329!2.43e-11!83;UBERON:0003077!2.43e-11!83;UBERON:0003059!2.43e-11!83;UBERON:0007282!2.43e-11!83;UBERON:0009618!2.43e-11!83;UBERON:0007285!2.43e-11!83;UBERON:0004290!4.39e-10!70;UBERON:0001134!1.22e-09!61;UBERON:0002036!1.22e-09!61;UBERON:0003082!1.22e-09!61;UBERON:0002385!2.08e-09!63;UBERON:0001015!2.08e-09!63;UBERON:0000383!2.08e-09!63;UBERON:0005256!3.77e-09!143;UBERON:0004872!7.46e-09!84;UBERON:0000486!8.72e-09!82;UBERON:0004923!1.25e-08!57;UBERON:0005631!2.30e-08!14;UBERON:0000158!2.30e-08!14;UBERON:0002199!4.78e-08!45;UBERON:0002416!4.78e-08!45;UBERON:0004573!6.78e-07!33;UBERON:0004571!6.78e-07!33;UBERON:0002384!8.93e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.06e-10;9!UBERON:0000042;3.06e-10;9!UBERON:0002384;2.05e-09;198!UBERON:0003688;4.59e-09;6!UBERON:0002358;4.59e-09;6!UBERON:0003684;4.59e-09;6!UBERON:0001178;4.59e-09;6!UBERON:0005631;1.32e-08;10!UBERON:0000158;1.32e-08;10!UBERON:0002385;3.31e-07;31!UBERON:0001015;3.31e-07;31!UBERON:0000383;3.31e-07;31!UBERON:0000478;6.60e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0004457;3.06e-10;9!UBERON:0000042;3.06e-10;9!UBERON:0002384;2.05e-09;198!UBERON:0003688;4.59e-09;6!UBERON:0002358;4.59e-09;6!UBERON:0003684;4.59e-09;6!UBERON:0001178;4.59e-09;6!UBERON:0005631;1.32e-08;10!UBERON:0000158;1.32e-08;10!UBERON:0002385;3.31e-07;31!UBERON:0001015;3.31e-07;31!UBERON:0000383;3.31e-07;31!UBERON:0000478;6.60e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.15e-13,371;UBERON:0003688,4.41e-09,6;UBERON:0002358,4.41e-09,6;UBERON:0003684,4.41e-09,6;UBERON:0001178,4.41e-09,6;UBERON:0004923,1.08e-08,66;UBERON:0005631,2.02e-08,14;UBERON:0000158,2.02e-08,14;UBERON:0002199,3.74e-08,46;UBERON:0002416,3.74e-08,46;UBERON:0004457,3.67e-07,12;UBERON:0000042,3.67e-07,12;UBERON:0002097,5.54e-07,41;UBERON:0000478,6.81e-07,24 | |||
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| ||
|short_description=p@chr15:48703363..48703377,- | |short_description=p@chr15:48703363..48703377,- | ||
}} | }} |
Revision as of 01:46, 21 November 2012
Short description: | p@chr15:48703363..48703377, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:48703363..48703377, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.54e-25 | 76 |
multi fate stem cell | 8.90e-19 | 427 |
somatic stem cell | 5.06e-18 | 433 |
stem cell | 4.73e-17 | 441 |
preadipocyte | 1.33e-14 | 12 |
connective tissue cell | 8.43e-13 | 361 |
mesenchymal cell | 1.08e-12 | 354 |
skin fibroblast | 1.73e-11 | 23 |
motile cell | 4.28e-10 | 386 |
extraembryonic cell | 1.17e-09 | 19 |
stromal cell | 3.19e-08 | 28 |
GAG secreting cell | 1.35e-07 | 9 |
carbohydrate secreting cell | 1.35e-07 | 9 |
muscle precursor cell | 8.01e-07 | 58 |
myoblast | 8.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.15e-13 | 371 |
omentum | 4.41e-09 | 6 |
peritoneum | 4.41e-09 | 6 |
abdominal cavity | 4.41e-09 | 6 |
visceral peritoneum | 4.41e-09 | 6 |
organ component layer | 1.08e-08 | 66 |
extraembryonic membrane | 2.02e-08 | 14 |
membranous layer | 2.02e-08 | 14 |
integument | 3.74e-08 | 46 |
integumental system | 3.74e-08 | 46 |
cavity lining | 3.67e-07 | 12 |
serous membrane | 3.67e-07 | 12 |
skin of body | 5.54e-07 | 41 |
extraembryonic structure | 6.81e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.09e-07 | 5 |
myotonic disease | 1.09e-07 | 5 |
muscle tissue disease | 1.09e-07 | 5 |
myopathy | 1.09e-07 | 5 |
muscular disease | 1.09e-07 | 5 |
myotonic dystrophy | 1.09e-07 | 5 |
ovarian cancer | 3.81e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.