FFCP PHASE1:Hg19::chr10:18689637..18689645,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2355!3.28e-08!1 | |ontology_enrichment_disease=DOID:2355!3.28e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.14e-39!20;UBERON:0002619!8.25e-36!22;UBERON:0001869!2.46e-34!32;UBERON:0001893!3.07e-32!34;UBERON:0000956!1.83e-31!25;UBERON:0000203!1.83e-31!25;UBERON:0002780!6.63e-31!41;UBERON:0001890!6.63e-31!41;UBERON:0006240!6.63e-31!41;UBERON:0003080!3.99e-30!42;UBERON:0002791!3.42e-28!33;UBERON:0002020!2.52e-27!34;UBERON:0003528!2.52e-27!34;UBERON:0001049!5.81e-25!57;UBERON:0005068!5.81e-25!57;UBERON:0006241!5.81e-25!57;UBERON:0007135!5.81e-25!57;UBERON:0002616!4.91e-24!59;UBERON:0000955!8.26e-23!69;UBERON:0006238!8.26e-23!69;UBERON:0001017!1.73e-21!82;UBERON:0005743!2.31e-20!86;UBERON:0003056!4.36e-20!61;UBERON:0000200!1.21e-19!6;UBERON:0007023!6.65e-19!115;UBERON:0000073!3.60e-18!94;UBERON:0001016!3.60e-18!94;UBERON:0003075!4.34e-18!86;UBERON:0007284!4.34e-18!86;UBERON:0002346!3.70e-17!90;UBERON:0000153!4.23e-16!129;UBERON:0007811!4.23e-16!129;UBERON:0001870!7.47e-16!2;UBERON:0001871!1.83e-14!7;UBERON:0000033!2.61e-13!123;UBERON:0002771!1.79e-10!3;UBERON:0002702!6.50e-09!1;UBERON:0004121!8.05e-09!169;UBERON:0002022!8.78e-09!1;UBERON:0007190!1.10e-08!1;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0001882!1.59e-08!1;UBERON:0005403!1.59e-08!1;UBERON:0003112!2.13e-08!1;UBERON:0000032!2.13e-08!1;UBERON:0005253!2.13e-08!1;UBERON:0003128!2.13e-08!1;UBERON:0002241!2.13e-08!1;UBERON:0001703!2.13e-08!1;UBERON:0004761!2.13e-08!1;UBERON:0009617!2.13e-08!1;UBERON:0000064!3.46e-08!219;UBERON:0002902!3.79e-08!1;UBERON:0009899!3.79e-08!1;UBERON:0002370!5.82e-08!4;UBERON:0005058!5.82e-08!4;UBERON:0009113!5.82e-08!4;UBERON:0003295!5.82e-08!4;UBERON:0005562!5.82e-08!4;UBERON:0001872!8.90e-07!5 | |ontology_enrichment_uberon=UBERON:0001950!2.14e-39!20;UBERON:0002619!8.25e-36!22;UBERON:0001869!2.46e-34!32;UBERON:0001893!3.07e-32!34;UBERON:0000956!1.83e-31!25;UBERON:0000203!1.83e-31!25;UBERON:0002780!6.63e-31!41;UBERON:0001890!6.63e-31!41;UBERON:0006240!6.63e-31!41;UBERON:0003080!3.99e-30!42;UBERON:0002791!3.42e-28!33;UBERON:0002020!2.52e-27!34;UBERON:0003528!2.52e-27!34;UBERON:0001049!5.81e-25!57;UBERON:0005068!5.81e-25!57;UBERON:0006241!5.81e-25!57;UBERON:0007135!5.81e-25!57;UBERON:0002616!4.91e-24!59;UBERON:0000955!8.26e-23!69;UBERON:0006238!8.26e-23!69;UBERON:0001017!1.73e-21!82;UBERON:0005743!2.31e-20!86;UBERON:0003056!4.36e-20!61;UBERON:0000200!1.21e-19!6;UBERON:0007023!6.65e-19!115;UBERON:0000073!3.60e-18!94;UBERON:0001016!3.60e-18!94;UBERON:0003075!4.34e-18!86;UBERON:0007284!4.34e-18!86;UBERON:0002346!3.70e-17!90;UBERON:0000153!4.23e-16!129;UBERON:0007811!4.23e-16!129;UBERON:0001870!7.47e-16!2;UBERON:0001871!1.83e-14!7;UBERON:0000033!2.61e-13!123;UBERON:0002771!1.79e-10!3;UBERON:0002702!6.50e-09!1;UBERON:0004121!8.05e-09!169;UBERON:0002022!8.78e-09!1;UBERON:0007190!1.10e-08!1;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0001882!1.59e-08!1;UBERON:0005403!1.59e-08!1;UBERON:0003112!2.13e-08!1;UBERON:0000032!2.13e-08!1;UBERON:0005253!2.13e-08!1;UBERON:0003128!2.13e-08!1;UBERON:0002241!2.13e-08!1;UBERON:0001703!2.13e-08!1;UBERON:0004761!2.13e-08!1;UBERON:0009617!2.13e-08!1;UBERON:0000064!3.46e-08!219;UBERON:0002902!3.79e-08!1;UBERON:0009899!3.79e-08!1;UBERON:0002370!5.82e-08!4;UBERON:0005058!5.82e-08!4;UBERON:0009113!5.82e-08!4;UBERON:0003295!5.82e-08!4;UBERON:0005562!5.82e-08!4;UBERON:0001872!8.90e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0000474;2.32e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0000474;2.32e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,2.06983080686081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.607495566580247,0,0,0.0524545881349981,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,2.06983080686081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.607495566580247,0,0,0.0524545881349981,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p28@CACNB2 | |short_description=p28@CACNB2 | ||
}} | }} |
Revision as of 10:39, 21 November 2012
Short description: | p28@CACNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_CACNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_ENST00000377315_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.