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{{UBERON
{{UBERON
|id=UBERON:0000166
|alt_id=
|name=oral opening
|anatomical_img_id=FMA:59806
|namespace=
|def="The opening of the head through which food passes into the body." [NLM:mouth]
|xref=BTO:0004698;;EHDAA2:0001326;;EHDAA:542;;EMAPA:16262;;FMA:59806;;MA:0000341;;TAO:0000590;;TGMA:0000131;;VHOG:0000280;;ZFA:0000590
|is_a=UBERON:0000161;;UBERON:0004119;;UBERON:0004121
|synonym="adult mouth" RELATED [];;"mouth" RELATED [];;"oral fissure" EXACT [FMA:59806];;"oral orifice" EXACT [FMA:59806];;"oral part of face" EXACT [];;"oral region" EXACT [];;"orofacial cavity" RELATED [];;"subdivision of mouth" EXACT []
|comment=note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate.
|comment=note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate.
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The opening of the head through which food passes into the body." [NLM:mouth]
|subset=uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000166
|is_a=UBERON:0000161;;UBERON:0004119;;UBERON:0004121
|is_obsolete=
|located_in=
|located_in=
|name=oral opening
|namespace=
|obo_creation_date=
|part_of=UBERON:0000165;;UBERON:0001004
|part_of=UBERON:0000165;;UBERON:0001004
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim;;vertebrate_core
|preceded_by=
|synonym="adult mouth" RELATED [];;"mouth" RELATED [];;"oral fissure" EXACT [FMA:59806];;"oral orifice" EXACT [FMA:59806];;"oral part of face" EXACT [];;"oral region" EXACT [];;"orofacial cavity" RELATED [];;"subdivision of mouth" EXACT []
|union_of=
|xref=BTO:0004698;;EHDAA2:0001326;;EHDAA:542;;EMAPA:16262;;FMA:59806;;MA:0000341;;TAO:0000590;;TGMA:0000131;;VHOG:0000280;;ZFA:0000590
}}
}}

Revision as of 18:35, 29 November 2012

Name:oral opening
Definition:"The opening of the head through which food passes into the body." [NLM:mouth]
Xrefs:
links:

BTO:0004698
EHDAA2:0001326
EHDAA:542
EMAPA:16262
FMA:59806
MA:0000341
TAO:0000590
TGMA:0000131
VHOG:0000280

ZFA:0000590
Synonyms: "adult mouth" RELATED []
"mouth" RELATED []
"oral fissure" EXACT [FMA:59806]
"oral orifice" EXACT [FMA:59806]
"oral part of face" EXACT []
"oral region" EXACT []
"orofacial cavity" RELATED []
"subdivision of mouth" EXACT []
Comments:note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate.
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000161(orifice),UBERON:0004119(endoderm-derived structure),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0000165(mouth),UBERON:0001004(respiratory system)



Children

part of:UBERON:0003293 (gland of oral region),UBERON:0003343 (mucosa of oral region)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000166 (oral opening), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data