UBERON:0001032: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FBbt_00005155-FMA_78499-MA_0002442-MIAA_0000031-WBbt_0005832-ZFA_0000282 | ||
|anatomical_img_id=FMA:78499 | |||
| | |||
|comment=note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs | |comment=note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs | ||
|created_by= | |created_by= | ||
| | |def="Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information." [Wikipedia:Sensory_system] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0001032 | |||
|is_a=UBERON:0000467 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=sensory system | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0004456 | |part_of=UBERON:0004456 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="organa sensuum" EXACT [FMA:75259, FMA:TA];;"organa sensuum" RELATED LATIN [Wikipedia:Sensory_system];;"sense organ subsystem" EXACT [];;"sense organs" EXACT [FMA:75259];;"sense organs set" EXACT [FMA:75259];;"sensory organ system" RELATED [];;"sensory subsystem" EXACT [] | ||
|union_of= | |||
|xref=AAO:0000555;;BILA:0000099;;EFO:0000805;;EHDAA2:0003094;;EMAPA:16192;;FBbt:00005827;;FMA:75259;;http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/c/c0/Gray722.png/200px-Gray722.png;;MA:0002442;;MAT:0000031;;MESH:A.09;;MIAA:0000031;;NIF_GrossAnatomy:nlx_anat_090816;;TAO:0000282;;XAO:0003194;;ZFA:0000282 | |||
}} | }} |
Revision as of 18:37, 29 November 2012
Name: | sensory system | |
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Definition: | "Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information." [Wikipedia:Sensory_system] | |
Xrefs: |
| |
Synonyms: |
"organa sensuum" EXACT [FMA:75259, FMA:TA] "organa sensuum" RELATED LATIN [Wikipedia:Sensory_system] "sense organ subsystem" EXACT [] "sense organs" EXACT [FMA:75259] "sense organs set" EXACT [FMA:75259] "sensory organ system" RELATED [] "sensory subsystem" EXACT [] | |
Comments: | note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs | |
Alt_id: | UBERON:FBbt_00005155-FMA_78499-MA_0002442-MIAA_0000031-WBbt_0005832-ZFA_0000282 | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000467(anatomical system) |
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part_of: | UBERON:0004456(entire sense organ system) |
Children
is a: | UBERON:0002104 (visual system),UBERON:0002105 (vestibulo-auditory system),UBERON:0004681 (vestibular system),UBERON:0007037 (mechanosensory system) |
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part of: | UBERON:0000020 (sense organ) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001032 (sensory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data