Personal tools

UBERON:0004571: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004571
|alt_id=
|name=systemic arterial system
|anatomical_img_id=FMA:45623
|namespace=
|def="the part of the cardiovascular system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Systemic_circulation#Arteries]
|xref=FMA:45623
|is_a=UBERON:0007798
|synonym="Systemic arterial circulatory system" EXACT [FMA:45623]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the part of the cardiovascular system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Systemic_circulation#Arteries]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004571
|is_a=UBERON:0007798
|is_obsolete=
|located_in=
|located_in=
|name=systemic arterial system
|namespace=
|obo_creation_date=
|part_of=UBERON:0004572
|part_of=UBERON:0004572
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="Systemic arterial circulatory system" EXACT [FMA:45623]
|union_of=
|xref=FMA:45623
}}
}}

Revision as of 18:43, 29 November 2012

Name:systemic arterial system
Definition:"the part of the cardiovascular system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Systemic_circulation#Arteries]
Xrefs:
links:
FMA:45623
Synonyms: "Systemic arterial circulatory system" EXACT [FMA:45623]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0007798(vascular system)
part_of:UBERON:0004572(arterial system)



Children

part of:UBERON:0004573 (systemic artery),UBERON:0010191 (aortic system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004571 (systemic arterial system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data