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{{UBERON
{{UBERON
|id=UBERON:0005284
|alt_id=
|name=brain vasculature
|anatomical_img_id=FMA:242007
|namespace=
|def="A vasculature that is part of a brain [Obol]." [OBOL:automatic]
|xref=EFO:0003491;;FMA:242007;;TAO:0000099;;ZFA:0000099
|is_a=UBERON:0002200;;UBERON:0002616;;UBERON:0006876
|synonym="vasculature of brain" EXACT [FMA:242007]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A vasculature that is part of a brain [Obol]." [OBOL:automatic]
|subset=vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005284
|is_a=UBERON:0004121;;UBERON:0006876
|is_obsolete=
|located_in=
|located_in=
|name=brain vasculature
|namespace=
|obo_creation_date=
|part_of=UBERON:0000955
|part_of=UBERON:0000955
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=vertebrate_core
|synonym="vasculature of brain" EXACT [FMA:242007]
|union_of=
|xref=EFO:0003491;;FMA:242007;;TAO:0000099;;ZFA:0000099
}}
}}

Latest revision as of 18:44, 29 November 2012

Name:brain vasculature
Definition:"A vasculature that is part of a brain [Obol]." [OBOL:automatic]
Xrefs:
links:

EFO:0003491
FMA:242007
TAO:0000099

ZFA:0000099
Synonyms: "vasculature of brain" EXACT [FMA:242007]
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0006876(vasculature of organ)
part_of:UBERON:0000955(brain)



Children

part of:CL:0002590 (smooth muscle cell of the brain vasculature)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005284 (brain vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data