NonredundantMotifs:174: Difference between revisions
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|entrez_gene_id=5076
|motif_cluster_2013_march_motif_members= /HOCOMOCO:PAX2_f1
|name=known174
|representative_motif_db=HOCOMOCO
|representative_motif_id=P...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;11.61359086445212;9.181878847397158;20.698906639755748;8.734333916362473!2;16.678528041260147;13.7992710931705;2.8792569480896426;16.871654185447206!3;2.8792569480896426;7.865266267520602;12.658149442764543;26.826037609592706!4;8.909824845833075;23.227181728904192;9.181878847397158;8.909824845833075!5;27.519614328963925;8.040757196991203;10.05094649623903;4.617392245773316!6;9.778892494674897;8.734333916362473;22.805659011097102;8.909824845833075!7;0.0;7.768703195427071;0.9656307209353769;41.49437635160503!8;4.020378598495607;29.33667748402469;14.86146488619943;2.010189299247806!9;41.31888542213442;2.010189299247806;6.89963554658525;0.0!10;7.593212265956518;12.93020344432868;4.713955317866856;24.991339239815485!11;10.92001414508085;2.975820020183178;29.43324055611822;6.89963554658525!12;13.20225744589281;26.10643867699384;6.030567897743428;4.889446247337449!13;9.875455566768428;4.617392245773316;25.68491595918675;10.05094649623903!14;2.8792569480896426;12.061135795486805;0.0;35.28831752439105!15;4.020378598495607;4.889446247337449;41.31888542213447;0.0!16;39.21213305079312;0.0;2.010189299247806;9.006387917926606!17;3.476270595367352;30.670925278617705;0.0;16.081514393982406!18;25.862718942708685;2.0914292106761976;7.252929459577784;15.021632655004856 | |||
|entrez_gene_id=5076 | |entrez_gene_id=5076 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:PAX2_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:PAX2_f1 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known174
- db :HOCOMOCO
- Id :PAX2_f1
- name :
- score :0.05972669118900677
- External refs:
- Internal refs:
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Sub Motif Members
