NonredundantMotifs:86: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=PO;A;C;G;T!1;16.036779;400.314749;252.832396;129.158191!2;169.486854;190.263125;323.424616;115.16752!3;136.043167;132.386673;514.355316;15.556959!4;0;152.717526;608.738164;36.886425!5;87.815317;20.287084;658.067803;32.171911!6;57.783052;222.554348;387.860645;130.14407!7;0;8.381785;2.084045;787.876284999999!8;0;2.563355;795.778759999999;0!9;0;798.342114999999;0;0!10;82.278891;545.320491;121.390989;49.351744!11;11.84575;574.518785;182.654909;29.322671!12;46.628883;217.985566;500.585965;33.141701!13;78.74285;446.229578000001;261.594763;11.774924!14;162.355746;173.656868;385.504271;76.82523!15;55.120838;275.577444;429.541251;38.102582!16;22.65987;212.894476;481.443724;81.344045!17;66.22211;452.036894000001;229.193313;50.889798!18;16.696347;420.451095000001;270.618302;90.576371 | |PWM=PO;A;C;G;T!1;16.036779;400.314749;252.832396;129.158191!2;169.486854;190.263125;323.424616;115.16752!3;136.043167;132.386673;514.355316;15.556959!4;0;152.717526;608.738164;36.886425!5;87.815317;20.287084;658.067803;32.171911!6;57.783052;222.554348;387.860645;130.14407!7;0;8.381785;2.084045;787.876284999999!8;0;2.563355;795.778759999999;0!9;0;798.342114999999;0;0!10;82.278891;545.320491;121.390989;49.351744!11;11.84575;574.518785;182.654909;29.322671!12;46.628883;217.985566;500.585965;33.141701!13;78.74285;446.229578000001;261.594763;11.774924!14;162.355746;173.656868;385.504271;76.82523!15;55.120838;275.577444;429.541251;38.102582!16;22.65987;212.894476;481.443724;81.344045!17;66.22211;452.036894000001;229.193313;50.889798!18;16.696347;420.451095000001;270.618302;90.576371 | ||
|entrez_gene_id= | |entrez_gene_id=HIC1 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:HIC1.p2 /UNIPROBE:Hic1_secondary;SCI09 /HOCOMOCO:HIC1_si | |motif_cluster_2013_march_motif_members= /SWISSREGULON:HIC1.p2 /UNIPROBE:Hic1_secondary;SCI09 /HOCOMOCO:HIC1_si | ||
|name=known86 | |name=known86 | ||
|representative_motif_db=SWISSREGULON | |representative_motif_db=SWISSREGULON | ||
|representative_motif_id=HIC1.p2 | |representative_motif_id=HIC1.p2 | ||
|representative_motif_name= | |representative_motif_name=HIC1 | ||
|score=4.112744468815355 | |score=4.112744468815355 | ||
|uniprot_entry_name= | |uniprot_entry_name=HIC1 | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
Revision as of 12:09, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known86
- db :SWISSREGULON
- Id :HIC1.p2
- name :HIC1
- score :4.112744468815355
- External refs:
- Internal refs:
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Sub Motif Members
