NonredundantMotifs:47

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant47
• db :HOMER
• Id :NANOG_mES-Nanog-ChIP-Seq
• name  :
• score :0.03222940009290264
  
• External refs:

EntrezGene:79923
UniProt:79923

• Internal refs:

EntrezGene:79923

Motif matrix
PO A C G T 1 2719 163 3316 583 2 576 1919 3879 407 3 176 5168 108 1329 4 2048 4191 237 305 5 6224 129 75 353 6 7 20 7 6747 7 7 2468 20 4286 8 4991 787 244 759 9 3933 780 1627 441 10 1234 3235 1539 773