NonredundantMotifs:50

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant50
• db :HOCOMOCO
• Id :MEF2D_f1
• name  :
• score :0.1104659323757388
  
• External refs:

EntrezGene:4209
UniProt:4209

• Internal refs:

EntrezGene:4209

Motif matrix

P0 A C G T 1 1.505263157894738 0.5789473684210523 6.4842105263157865 2.431578947368417 2 0.0 9.147368421052631 1.0421052631578953 0.8105263157894738 3 0.0 0.0 0.0 11.0 4 9.957894736842107 0.0 1.0421052631578953 0.0 5 0.0 1.0421052631578953 0.0 9.957894736842107 6 2.0842105263157857 0.0 0.0 8.915789473684214 7 1.0421052631578953 0.0 0.0 9.957894736842107 8 4.168421052631583 0.0 0.0 6.831578947368428 9 1.0421052631578953 0.0 0.0 9.957894736842107 10 9.957894736842107 0.0 1.0421052631578953 0.0 11 0.9263157894736845 0.0 7.063157894736845 3.010526315789476 12 3.4736842105263213 4.284210526315786 2.663157894736845 0.5789473684210523