NonredundantMotifs:86

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant86
• db :UNIPROBE
• Id :Hic1_secondary
• name :SCI09
• score :0.17271721728767128
  
• External refs:

EntrezGene:3090
UniProt:3090

• Internal refs:

EntrezGene:3090

Motif matrix

P0 A C G T 1 0.204897874897343 0.149950753888391 0.363373255563378 0.281778115650889 2 0.112945913230244 0.243699644851954 0.437937553554237 0.205416888363565 3 0.205232315604922 0.182318733390399 0.383143496346029 0.22930545465865 4 0.242063126030163 0.152490781903701 0.296425994376723 0.309020097689413 5 0.312921551025571 0.0285229180559956 0.585026257014466 0.0735292739039672 6 0.00675352468752789 0.0111778028895601 0.00534573473982521 0.976722937683087 7 0.127589016392269 0.00556162725116544 0.859435540116235 0.00741381624033058 8 0.0100455533423129 0.974694231021875 0.00700073964228847 0.00825947599352394 9 0.0102624745327377 0.97476940344729 0.00606887782492648 0.00889924419504614 10 0.0151223885146539 0.966101419772803 0.00796962805020938 0.0108065636623336 11 0.556510660673005 0.167389239492947 0.114634750142418 0.161465349691631 12 0.58645892034666 0.0447861896647228 0.0734502749979671 0.295304614990651 13 0.297709845125996 0.194665672171834 0.223655324517526 0.283969158184644 14 0.303201578697961 0.25080943853057 0.206474647119874 0.239514335651594 15 0.279337565766586 0.160655267373581 0.314457267246382 0.245549899613451 16 0.266477103035305 0.266890093054894 0.299970355686276 0.166662448223524