NonredundantMotifs:125: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=130497
|motif_cluster_2013_march_motif_members= /UNIPROBE:Osr2_secondary;SCI09~Osr1_secondary;SCI09
|name=known125
|representative_motif_db=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.454194304555283;0.0926763518899079;0.30632619139738;0.146803152157429!2;0.183010716498827;0.349823482489622;0.148031258788473;0.319134542223078!3;0.402809422283432;0.216432822776033;0.154083378339873;0.226674376600662!4;0.211744857574739;0.252048888259386;0.161182320792434;0.375023933373441!5;0.136344555336227;0.0836895552992941;0.743914245071156;0.0360516442933227!6;0.026957376959848;0.909548628289233;0.0245450439318233;0.0389489508190957!7;0.0290797895171459;0.0820997177408951;0.0325738009191948;0.856246691822764!8;0.787454478586303;0.0482018628212394;0.0524858416189365;0.111857816973521!9;0.0734608923621929;0.881277971792695;0.0223131340273003;0.0229480018178121!10;0.0267906902775263;0.545542386470539;0.0108154186008131;0.416851504651121!11;0.322008063620382;0.10156514180796;0.0264891081317768;0.549937686439881!12;0.458267490951874;0.105780810844209;0.425231271008236;0.0107204271956807!13;0.432794010397369;0.314870360762378;0.0906850017228712;0.161650627117381!14;0.260978284459642;0.176097037348364;0.204310496587905;0.358614181604089!15;0.28287710971685;0.259359368942012;0.208880730294336;0.248882791046803!16;0.274196503978092;0.291830703264195;0.231013322506392;0.202959470251321 | |||
|entrez_gene_id=130497 | |entrez_gene_id=130497 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Osr2_secondary;SCI09~Osr1_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Osr2_secondary;SCI09~Osr1_secondary;SCI09 | ||
|name= | |name=non-redundant125 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Osr1_secondary | |representative_motif_id=Osr1_secondary | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant125
- db :UNIPROBE
- Id :Osr1_secondary
- name :SCI09
- score :0.03785698183985985
- External refs:
- Internal refs:
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Sub Motif Members
