NonredundantMotifs:205: Difference between revisions
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|entrez_gene_id=8091
|motif_cluster_2013_march_motif_members= /HOCOMOCO:HMGA2_f1
|name=known205
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;71.751724137931;1.2413793103448247;1.2413793103448247;1.2413793103448247!2;54.62068965517242;0.0;0.0;20.85517241379316!3;11.917241379310322;0.0;0.0;63.55862068965518!4;44.6896551724138;0.0;0.0;30.78620689655177!5;39.72413793103453;1.9862068965517228;0.9931034482758614;32.77241379310348!6;12.910344827586252;20.85517241379316;8.93793103448276;32.77241379310348!7;0.0;41.71034482758624;29.793103448275918;3.972413793103453!8;1.9862068965517228;24.827586206896573;46.67586206896551;1.9862068965517228!9;0.0;37.73793103448283;32.77241379310348;4.965517241379315!10;1.9862068965517228;31.779310344827625;40.71724137931039;0.9931034482758614!11;71.50344827586208;0.0;2.9793103448275917;0.9931034482758614!12;59.58620689655176;0.9931034482758614;0.0;14.896551724137959!13;1.9862068965517228;0.9931034482758614;0.0;72.49655172413793!14;59.58620689655176;0.0;0.9931034482758614;14.896551724137959!15;1.4896551724137959;1.4896551724137959;1.4896551724137959;71.00689655172415 | |||
|entrez_gene_id=8091 | |entrez_gene_id=8091 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:HMGA2_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:HMGA2_f1 | ||
|name= | |name=non-redundant205 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=HMGA2_f1 | |representative_motif_id=HMGA2_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant205
- db :HOCOMOCO
- Id :HMGA2_f1
- name :
- score :0.021276924316197637
- External refs:
- Internal refs:
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Sub Motif Members
