FFCP PHASE1:Hg19::chr10:30025857..30025872,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009xld.1_5end | |association_with_transcript=0bp_to_uc009xld.1_5end |
Revision as of 01:06, 6 July 2013
Short description: | p2@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SVIL_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_uc009xld.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SVIL |
---|
0
100
200
300
400
500
600
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.06e-10 | 36 |
endothelial cell of vascular tree | 4.07e-10 | 24 |
meso-epithelial cell | 2.03e-09 | 45 |
blood vessel endothelial cell | 4.95e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.95e-08 | 18 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
embryo | 5.12e-19 | 592 |
developing anatomical structure | 4.94e-18 | 581 |
vasculature | 1.87e-17 | 78 |
vascular system | 1.87e-17 | 78 |
anatomical conduit | 1.87e-17 | 240 |
embryonic structure | 7.63e-17 | 564 |
germ layer | 1.85e-16 | 560 |
germ layer / neural crest | 1.85e-16 | 560 |
embryonic tissue | 1.85e-16 | 560 |
presumptive structure | 1.85e-16 | 560 |
Showing 1 to 10 of 39 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.