FFCP PHASE1:Hg19::chr17:11144580..11144595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=388336 | |EntrezGene=388336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34491 | |HGNC=34491 | ||
|TSSclassifier=S | |||
|UniProt=Q6ZSJ9 | |UniProt=Q6ZSJ9 | ||
|association_with_transcript=0bp_to_ENST00000432116,ENST00000441885_5end | |association_with_transcript=0bp_to_ENST00000432116,ENST00000441885_5end | ||
Revision as of 04:08, 7 July 2013
| Short description: | p2@SHISA6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_SHISA6_5end |
| Coexpression cluster: | C1014_hippocampus_locus_spinal_medulla_neuroectodermal_cerebellum_thalamus |
| Association with transcript: | 0bp_to_ENST00000432116, ENST00000441885_5end |
| EntrezGene: | SHISA6 |
| HGNC: | 34491 |
| UniProt: | Q6ZSJ9 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@SHISA6 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| posterior neural tube | 1.69e-58 | 15 |
| chordal neural plate | 1.69e-58 | 15 |
| brainstem | 1.08e-48 | 6 |
| segmental subdivision of hindbrain | 1.05e-37 | 12 |
| hindbrain | 1.05e-37 | 12 |
| presumptive hindbrain | 1.05e-37 | 12 |
| locus ceruleus | 3.28e-37 | 2 |
| brainstem nucleus | 3.28e-37 | 2 |
| hindbrain nucleus | 3.28e-37 | 2 |
| segmental subdivision of nervous system | 7.91e-35 | 13 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
