FFCP PHASE1:Hg19::chr22:35806599..35806615,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4174 | |EntrezGene=4174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6948 | |HGNC=6948 | ||
|TSSclassifier=N | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_ENST00000493076,uc003anw.1_5end | |association_with_transcript=197bp_to_ENST00000493076,uc003anw.1_5end |
Revision as of 09:46, 9 July 2013
Short description: | p8@MCM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_MCM5_5end |
Coexpression cluster: | C2621_migratory_Eosinophils_Neutrophils_CD14_hairy_immature_Mast |
Association with transcript: | 197bp_to_ENST00000493076, uc003anw.1_5end |
EntrezGene: | MCM5 |
HGNC: | 6948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@MCM5 |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.46e-38 | 8 |
blood cell | 5.74e-28 | 11 |
leukocyte | 1.87e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.01e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-22 | 161 |
hematopoietic stem cell | 1.21e-21 | 168 |
hematopoietic cell | 2.20e-20 | 177 |
eosinophil | 5.37e-19 | 2 |
Langerhans cell | 5.59e-17 | 5 |
lymphocyte of B lineage | 7.03e-17 | 24 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.89e-08 | 371 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.59e-10 | 1 |
myeloma | 2.59e-10 | 1 |
Showing 1 to 2 of 2 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.