FFCP PHASE1:Hg19::chr9:139940414..139940423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56654 | |EntrezGene=56654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7899 | |HGNC=7899 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=84bp_to_ENST00000488145_5end | |association_with_transcript=84bp_to_ENST00000488145_5end | ||
Revision as of 22:07, 10 July 2013
| Short description: | p7@NPDC1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_NPDC1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 84bp_to_ENST00000488145_5end |
| EntrezGene: | NPDC1 |
| HGNC: | 7899 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@NPDC1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| androgen binding protein secreting cell | 1.27e-08 | 1 |
| seminiferous tubule epithelial cell | 1.27e-08 | 1 |
| Sertoli cell | 1.27e-08 | 1 |
| smooth muscle cell of the pulmonary artery | 2.46e-08 | 1 |
| vascular associated smooth muscle cell | 1.49e-07 | 32 |
| Ontology term | p-value | n |
|---|---|---|
| cardiac atrium | 1.67e-15 | 2 |
| future cardiac atrium | 1.67e-15 | 2 |
| cardiac chamber | 1.22e-10 | 3 |
| outflow tract | 1.48e-10 | 3 |
| lower lobe of right lung | 7.01e-09 | 1 |
| right lung lobe | 7.01e-09 | 1 |
| lower lobe of lung | 7.01e-09 | 1 |
| lobe of lung | 7.01e-09 | 1 |
| right lung | 7.01e-09 | 1 |
| tricuspid valve | 9.46e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
