FFCP PHASE1:Hg19::chr10:54434202..54434206,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C136|description=CAGE_peak_at_chr10:54434202..54434206,+|id=chr10:54434202..54434206,+|ontology_enrichment_celltype=CL:0000946!9.43e-21!1;CL:0000786!9.43e-21!1;CL:0000980!9.43e-21!1;CL:0000243!3.68e-11!15;CL:0000125!3.68e-11!15;CL:0000030!3.68e-11!15;CL:0000339!3.68e-11!15;CL:0000785!4.52e-11!2;CL:0000955!4.52e-11!2;CL:0000818!4.52e-11!2;CL:0000954!4.52e-11!2;CL:0000816!4.52e-11!2;CL:0000095!4.72e-10!17;CL:0000123!4.72e-10!17;CL:0000062!2.92e-08!11;CL:0000375!2.92e-08!11;CL:0000335!2.92e-08!11;CL:0002573!7.76e-08!2;CL:0000817!8.29e-08!3;CL:0002319!3.02e-07!25|ontology_enrichment_celltype_v019=CL:0000062;1.35e-18;9!CL:0000243;2.58e-10;15!CL:0000125;2.58e-10;15!CL:0000095;2.46e-09;17!CL:0002319;7.45e-07;25|ontology_enrichment_celltype_v019_2=CL:0000062,2.02e-15,11;CL:0000375,2.02e-15,11;CL:0000335,2.02e-15,11;CL:0000243,2.58e-10,15;CL:0000125,2.58e-10,15;CL:0000030,2.58e-10,15;CL:0000339,2.58e-10,15;CL:0000095,2.46e-09,17;CL:0000123,2.46e-09,17;CL:0002319,7.45e-07,25|ontology_enrichment_development_v019=CL:0000335;2.02e-15;11!UBERON:0006238;2.33e-15;10!CL:0000339;2.58e-10;15|ontology_enrichment_disease=DOID:3093!1.29e-07!11|ontology_enrichment_disease_v019=DOID:3093;3.59e-14;11|ontology_enrichment_disease_v019_2=DOID:3093,3.59e-14,11|ontology_enrichment_uberon=UBERON:0002369!6.34e-08!3;UBERON:0001235!6.34e-08!3;UBERON:0006858!6.34e-08!3|ontology_enrichment_uberon_v019=UBERON:0001474;7.75e-10;18!UBERON:0004765;4.15e-07;26|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37354197227515,5.5281364946794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7178231164288,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08723364858891,1.98745407993433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:54434202..54434206,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_at_chr10:54434202..54434206,+ | |||
|id=chr10:54434202..54434206,+ | |||
|ontology_enrichment_celltype=CL:0000946!9.43e-21!1;CL:0000786!9.43e-21!1;CL:0000980!9.43e-21!1;CL:0000243!3.68e-11!15;CL:0000125!3.68e-11!15;CL:0000030!3.68e-11!15;CL:0000339!3.68e-11!15;CL:0000785!4.52e-11!2;CL:0000955!4.52e-11!2;CL:0000818!4.52e-11!2;CL:0000954!4.52e-11!2;CL:0000816!4.52e-11!2;CL:0000095!4.72e-10!17;CL:0000123!4.72e-10!17;CL:0000062!2.92e-08!11;CL:0000375!2.92e-08!11;CL:0000335!2.92e-08!11;CL:0002573!7.76e-08!2;CL:0000817!8.29e-08!3;CL:0002319!3.02e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.35e-18;9!CL:0000243;2.58e-10;15!CL:0000125;2.58e-10;15!CL:0000095;2.46e-09;17!CL:0002319;7.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.02e-15,11;CL:0000375,2.02e-15,11;CL:0000335,2.02e-15,11;CL:0000243,2.58e-10,15;CL:0000125,2.58e-10,15;CL:0000030,2.58e-10,15;CL:0000339,2.58e-10,15;CL:0000095,2.46e-09,17;CL:0000123,2.46e-09,17;CL:0002319,7.45e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000335;2.02e-15;11!UBERON:0006238;2.33e-15;10!CL:0000339;2.58e-10;15 | |||
|ontology_enrichment_disease=DOID:3093!1.29e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;3.59e-14;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.59e-14,11 | |||
|ontology_enrichment_uberon=UBERON:0002369!6.34e-08!3;UBERON:0001235!6.34e-08!3;UBERON:0006858!6.34e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;7.75e-10;18!UBERON:0004765;4.15e-07;26 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37354197227515,5.5281364946794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7178231164288,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08723364858891,1.98745407993433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:54434202..54434206,+ | |||
}} |
Revision as of 13:40, 10 September 2013
Short description: | p@chr10:54434202..54434206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:54434202..54434206, + |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.02e-15 | 11 |
osteoprogenitor cell | 2.02e-15 | 11 |
mesenchyme condensation cell | 2.02e-15 | 11 |
glial cell (sensu Vertebrata) | 2.58e-10 | 15 |
glial cell | 2.58e-10 | 15 |
glioblast | 2.58e-10 | 15 |
glioblast (sensu Vertebrata) | 2.58e-10 | 15 |
neuron associated cell | 2.46e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.46e-09 | 17 |
neural cell | 7.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.59e-14 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.