FFCP PHASE1:Hg19::chr10:89577589..89577596,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84896|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25903|TSSclassifier=W|UniProt=Q8NBU5|association_with_transcript=320bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end|coexpression_cluster_id=C58|description=CAGE_peak_7_at_ATAD1_5end|id=chr10:89577589..89577596,-|ontology_enrichment_celltype=CL:0000148!5.10e-08!10;CL:0000541!5.10e-08!10|ontology_enrichment_celltype_v019=CL:0000148;7.01e-25;10!CL:0000147;6.86e-18;14!CL:0002566;1.78e-16;1!CL:0000710;1.26e-12;20!CL:0000075;2.00e-09;27!CL:0002077;7.67e-08;34|ontology_enrichment_celltype_v019_2=CL:0000148,8.18e-25,10;CL:0000541,8.18e-25,10;CL:0000147,7.65e-18,14;CL:0002566,1.93e-16,1;CL:0000710,1.36e-12,20;CL:0000075,2.11e-09,27;CL:0002077,1.63e-07,34|ontology_enrichment_development_v019=UBERON:0008947;1.18e-08;29|ontology_enrichment_disease=DOID:0050687!2.36e-08!143;DOID:305!3.28e-07!106|ontology_enrichment_disease_v019=DOID:1909;3.86e-09;2|ontology_enrichment_disease_v019_2=DOID:1909,4.02e-09,2|ontology_enrichment_uberon=UBERON:0001737!1.43e-15!9;UBERON:0002619!2.92e-09!22;UBERON:0000956!8.62e-08!25;UBERON:0000203!8.62e-08!25;UBERON:0001893!1.24e-07!34;UBERON:0001869!2.18e-07!32;UBERON:0001950!2.20e-07!20;UBERON:0001557!2.48e-07!19;UBERON:0000073!2.49e-07!94;UBERON:0001016!2.49e-07!94;UBERON:0001049!4.36e-07!57;UBERON:0005068!4.36e-07!57;UBERON:0006241!4.36e-07!57;UBERON:0007135!4.36e-07!57;UBERON:0002791!6.87e-07!33;UBERON:0002020!7.99e-07!34;UBERON:0003528!7.99e-07!34|ontology_enrichment_uberon_v019=UBERON:0001737;9.26e-16;9!UBERON:0001557;9.26e-16;9!UBERON:0000072;4.57e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.16e-15,9;UBERON:0001557,9.88e-08,19|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.661763836394364,0.653638332277218,0.949082476444386,1.75280700608214,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,1.58744735730423,1.52795370223311,0,0,0.616964956219941,5.40617504119051,9.43227227680908,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0.503865495708552,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.435753854075961,0,0,0,0.46112780877612,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,1.77912677208373,0.123563938946503,0.313265848516366,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,2.12863928835987,2.26576882967175,1.97077096927702,0.0969890164884194,0,0,0,0,0.253243183823515,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.492137407573744,0.169346664131569,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,1.79287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0.303298235083296,5.13837600380941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0.127894371303652,0.754773679776773,0.157265941855896,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0.15963385905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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84896 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25903 | |||
|TSSclassifier=W | |||
|UniProt=Q8NBU5 | |||
|association_with_transcript=320bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_7_at_ATAD1_5end | |||
|id=chr10:89577589..89577596,- | |||
|ontology_enrichment_celltype=CL:0000148!5.10e-08!10;CL:0000541!5.10e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.01e-25;10!CL:0000147;6.86e-18;14!CL:0002566;1.78e-16;1!CL:0000710;1.26e-12;20!CL:0000075;2.00e-09;27!CL:0002077;7.67e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.18e-25,10;CL:0000541,8.18e-25,10;CL:0000147,7.65e-18,14;CL:0002566,1.93e-16,1;CL:0000710,1.36e-12,20;CL:0000075,2.11e-09,27;CL:0002077,1.63e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.18e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!2.36e-08!143;DOID:305!3.28e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.86e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.43e-15!9;UBERON:0002619!2.92e-09!22;UBERON:0000956!8.62e-08!25;UBERON:0000203!8.62e-08!25;UBERON:0001893!1.24e-07!34;UBERON:0001869!2.18e-07!32;UBERON:0001950!2.20e-07!20;UBERON:0001557!2.48e-07!19;UBERON:0000073!2.49e-07!94;UBERON:0001016!2.49e-07!94;UBERON:0001049!4.36e-07!57;UBERON:0005068!4.36e-07!57;UBERON:0006241!4.36e-07!57;UBERON:0007135!4.36e-07!57;UBERON:0002791!6.87e-07!33;UBERON:0002020!7.99e-07!34;UBERON:0003528!7.99e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.26e-16;9!UBERON:0001557;9.26e-16;9!UBERON:0000072;4.57e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.16e-15,9;UBERON:0001557,9.88e-08,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.661763836394364,0.653638332277218,0.949082476444386,1.75280700608214,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,1.58744735730423,1.52795370223311,0,0,0.616964956219941,5.40617504119051,9.43227227680908,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0.503865495708552,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.435753854075961,0,0,0,0.46112780877612,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,1.77912677208373,0.123563938946503,0.313265848516366,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,2.12863928835987,2.26576882967175,1.97077096927702,0.0969890164884194,0,0,0,0,0.253243183823515,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.492137407573744,0.169346664131569,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,1.79287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0.303298235083296,5.13837600380941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0.127894371303652,0.754773679776773,0.157265941855896,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.357382720883282,0,0.813689977576877,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0.356760272332706,0,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p7@ATAD1 | |||
}} |
Revision as of 14:49, 10 September 2013
Short description: | p7@ATAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ATAD1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 320bp_to_ENST00000308448, ENST00000541004, NM_032810, uc001kez.1_5end |
EntrezGene: | ATAD1 |
HGNC: | 25903 |
UniProt: | Q8NBU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.18e-25 | 10 |
melanoblast | 8.18e-25 | 10 |
pigment cell | 7.65e-18 | 14 |
dark melanocyte | 1.93e-16 | 1 |
neurecto-epithelial cell | 1.36e-12 | 20 |
columnar/cuboidal epithelial cell | 2.11e-09 | 27 |
ecto-epithelial cell | 1.63e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.16e-15 | 9 |
upper respiratory tract | 9.88e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.02e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.