FFCP PHASE1:Hg19::chr10:95360822..95360833,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9922|TSSclassifier=W|UniProt=|association_with_transcript=-336bp_to_ENST00000471333_5end|coexpression_cluster_id=C5|description=CAGE_peak_8_at_RBP4_5end|id=chr10:95360822..95360833,-|ontology_enrichment_celltype=CL:0000135!1.97e-12!3;CL:0000386!1.97e-12!3;CL:0000388!1.97e-12!3;CL:0000136!6.25e-09!15;CL:0000181!8.15e-08!12;CL:0000417!8.15e-08!12;CL:0000668!8.15e-08!12;CL:0000414!8.15e-08!12;CL:0000412!8.15e-08!12;CL:0000182!8.15e-08!12|ontology_enrichment_celltype_v019=CL:0002617;3.89e-11;2!CL:0000135;7.50e-08;3!CL:0000388;7.50e-08;3!CL:0000182;1.24e-07;12!CL:0000136;5.59e-07;13|ontology_enrichment_celltype_v019_2=CL:0002617,3.35e-11,2;CL:0000135,7.26e-08,3;CL:0000388,7.26e-08,3;CL:0000182,1.24e-07,12|ontology_enrichment_development_v019=UBERON:0004161;3.03e-08;11!UBERON:0009497;4.13e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.11e-22!57;UBERON:0005068!5.11e-22!57;UBERON:0006241!5.11e-22!57;UBERON:0007135!5.11e-22!57;UBERON:0002616!4.12e-21!59;UBERON:0003080!3.59e-20!42;UBERON:0002780!4.27e-18!41;UBERON:0001890!4.27e-18!41;UBERON:0006240!4.27e-18!41;UBERON:0000955!4.79e-17!69;UBERON:0006238!4.79e-17!69;UBERON:0003075!4.92e-16!86;UBERON:0007284!4.92e-16!86;UBERON:0007023!4.93e-16!115;UBERON:0005743!8.65e-16!86;UBERON:0001017!4.03e-15!82;UBERON:0002346!4.36e-15!90;UBERON:0003056!1.57e-14!61;UBERON:0000073!8.17e-14!94;UBERON:0001016!8.17e-14!94;UBERON:0001869!7.13e-13!32;UBERON:0000043!1.97e-12!3;UBERON:0002020!4.87e-12!34;UBERON:0003528!4.87e-12!34;UBERON:0001893!5.39e-12!34;UBERON:0002298!5.15e-11!8;UBERON:0002791!2.10e-10!33;UBERON:0000025!1.28e-09!194;UBERON:0001950!1.32e-09!20;UBERON:0003296!3.13e-09!4;UBERON:0010133!3.13e-09!4;UBERON:0002107!3.49e-09!19;UBERON:0006925!3.49e-09!19;UBERON:0008836!3.49e-09!19;UBERON:0002368!3.82e-09!35;UBERON:0001894!7.15e-09!7;UBERON:0006222!7.15e-09!7;UBERON:0000007!1.06e-08!2;UBERON:0002619!1.16e-08!22;UBERON:0000369!1.45e-08!4;UBERON:0002435!1.45e-08!4;UBERON:0000204!1.45e-08!4;UBERON:0010082!1.45e-08!4;UBERON:0000033!1.46e-08!123;UBERON:0000153!6.01e-08!129;UBERON:0007811!6.01e-08!129;UBERON:0008835!8.70e-08!22;UBERON:0003894!8.70e-08!22;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25;UBERON:0009854!2.11e-07!23;UBERON:0004111!3.98e-07!241;UBERON:0007499!9.97e-07!25;UBERON:0009497!9.97e-07!25;UBERON:0000015!9.97e-07!25;UBERON:0002423!9.97e-07!25;UBERON:0006235!9.97e-07!25;UBERON:0004161!9.97e-07!25|ontology_enrichment_uberon_v019=UBERON:0002107;3.18e-17;19!UBERON:0006925;3.18e-17;19!UBERON:0002423;3.43e-13;25!UBERON:0002368;5.44e-13;33!UBERON:0000007;3.89e-11;2!UBERON:0002365;1.30e-10;31!UBERON:0002330;1.30e-10;31!UBERON:0000949;1.66e-08;43!UBERON:0007846;7.50e-08;3!UBERON:0000043;7.50e-08;3!UBERON:0007845;7.50e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.18e-17,19;UBERON:0006925,3.18e-17,19;UBERON:0008836,3.18e-17,19;UBERON:0008835,6.20e-15,22;UBERON:0003894,6.20e-15,22;UBERON:0002368,2.30e-14,35;UBERON:0009854,2.65e-14,23;UBERON:0007499,3.44e-13,25;UBERON:0009497,3.44e-13,25;UBERON:0000015,3.44e-13,25;UBERON:0002423,3.44e-13,25;UBERON:0006235,3.44e-13,25;UBERON:0004161,3.44e-13,25;UBERON:0009856,1.07e-12,26;UBERON:0000949,3.32e-11,45;UBERON:0000007,4.09e-11,2;UBERON:0002365,1.04e-10,31;UBERON:0002330,1.04e-10,31;UBERON:0002530,1.44e-08,59;UBERON:0007846,7.26e-08,3;UBERON:0000043,7.26e-08,3;UBERON:0007845,7.26e-08,3|phase1_expression=0,1.49870366723688,0,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46117361732928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9922 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-336bp_to_ENST00000471333_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_RBP4_5end | |||
|id=chr10:95360822..95360833,- | |||
|ontology_enrichment_celltype=CL:0000135!1.97e-12!3;CL:0000386!1.97e-12!3;CL:0000388!1.97e-12!3;CL:0000136!6.25e-09!15;CL:0000181!8.15e-08!12;CL:0000417!8.15e-08!12;CL:0000668!8.15e-08!12;CL:0000414!8.15e-08!12;CL:0000412!8.15e-08!12;CL:0000182!8.15e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002617;3.89e-11;2!CL:0000135;7.50e-08;3!CL:0000388;7.50e-08;3!CL:0000182;1.24e-07;12!CL:0000136;5.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.35e-11,2;CL:0000135,7.26e-08,3;CL:0000388,7.26e-08,3;CL:0000182,1.24e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.03e-08;11!UBERON:0009497;4.13e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.11e-22!57;UBERON:0005068!5.11e-22!57;UBERON:0006241!5.11e-22!57;UBERON:0007135!5.11e-22!57;UBERON:0002616!4.12e-21!59;UBERON:0003080!3.59e-20!42;UBERON:0002780!4.27e-18!41;UBERON:0001890!4.27e-18!41;UBERON:0006240!4.27e-18!41;UBERON:0000955!4.79e-17!69;UBERON:0006238!4.79e-17!69;UBERON:0003075!4.92e-16!86;UBERON:0007284!4.92e-16!86;UBERON:0007023!4.93e-16!115;UBERON:0005743!8.65e-16!86;UBERON:0001017!4.03e-15!82;UBERON:0002346!4.36e-15!90;UBERON:0003056!1.57e-14!61;UBERON:0000073!8.17e-14!94;UBERON:0001016!8.17e-14!94;UBERON:0001869!7.13e-13!32;UBERON:0000043!1.97e-12!3;UBERON:0002020!4.87e-12!34;UBERON:0003528!4.87e-12!34;UBERON:0001893!5.39e-12!34;UBERON:0002298!5.15e-11!8;UBERON:0002791!2.10e-10!33;UBERON:0000025!1.28e-09!194;UBERON:0001950!1.32e-09!20;UBERON:0003296!3.13e-09!4;UBERON:0010133!3.13e-09!4;UBERON:0002107!3.49e-09!19;UBERON:0006925!3.49e-09!19;UBERON:0008836!3.49e-09!19;UBERON:0002368!3.82e-09!35;UBERON:0001894!7.15e-09!7;UBERON:0006222!7.15e-09!7;UBERON:0000007!1.06e-08!2;UBERON:0002619!1.16e-08!22;UBERON:0000369!1.45e-08!4;UBERON:0002435!1.45e-08!4;UBERON:0000204!1.45e-08!4;UBERON:0010082!1.45e-08!4;UBERON:0000033!1.46e-08!123;UBERON:0000153!6.01e-08!129;UBERON:0007811!6.01e-08!129;UBERON:0008835!8.70e-08!22;UBERON:0003894!8.70e-08!22;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25;UBERON:0009854!2.11e-07!23;UBERON:0004111!3.98e-07!241;UBERON:0007499!9.97e-07!25;UBERON:0009497!9.97e-07!25;UBERON:0000015!9.97e-07!25;UBERON:0002423!9.97e-07!25;UBERON:0006235!9.97e-07!25;UBERON:0004161!9.97e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.18e-17;19!UBERON:0006925;3.18e-17;19!UBERON:0002423;3.43e-13;25!UBERON:0002368;5.44e-13;33!UBERON:0000007;3.89e-11;2!UBERON:0002365;1.30e-10;31!UBERON:0002330;1.30e-10;31!UBERON:0000949;1.66e-08;43!UBERON:0007846;7.50e-08;3!UBERON:0000043;7.50e-08;3!UBERON:0007845;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.18e-17,19;UBERON:0006925,3.18e-17,19;UBERON:0008836,3.18e-17,19;UBERON:0008835,6.20e-15,22;UBERON:0003894,6.20e-15,22;UBERON:0002368,2.30e-14,35;UBERON:0009854,2.65e-14,23;UBERON:0007499,3.44e-13,25;UBERON:0009497,3.44e-13,25;UBERON:0000015,3.44e-13,25;UBERON:0002423,3.44e-13,25;UBERON:0006235,3.44e-13,25;UBERON:0004161,3.44e-13,25;UBERON:0009856,1.07e-12,26;UBERON:0000949,3.32e-11,45;UBERON:0000007,4.09e-11,2;UBERON:0002365,1.04e-10,31;UBERON:0002330,1.04e-10,31;UBERON:0002530,1.44e-08,59;UBERON:0007846,7.26e-08,3;UBERON:0000043,7.26e-08,3;UBERON:0007845,7.26e-08,3 | |||
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|short_description=p8@RBP4 | |||
}} |
Revision as of 15:03, 10 September 2013
Short description: | p8@RBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RBP4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -336bp_to_ENST00000471333_5end |
EntrezGene: | RBP4 |
HGNC: | 9922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.35e-11 | 2 |
fibrocyte | 7.26e-08 | 3 |
tendon cell | 7.26e-08 | 3 |
hepatocyte | 1.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.18e-17 | 19 |
digestive gland | 3.18e-17 | 19 |
liver bud | 3.18e-17 | 19 |
hepatic diverticulum | 6.20e-15 | 22 |
liver primordium | 6.20e-15 | 22 |
endocrine gland | 2.30e-14 | 35 |
digestive tract diverticulum | 2.65e-14 | 23 |
epithelial sac | 3.44e-13 | 25 |
epithelium of foregut-midgut junction | 3.44e-13 | 25 |
anatomical boundary | 3.44e-13 | 25 |
hepatobiliary system | 3.44e-13 | 25 |
foregut-midgut junction | 3.44e-13 | 25 |
septum transversum | 3.44e-13 | 25 |
sac | 1.07e-12 | 26 |
endocrine system | 3.32e-11 | 45 |
pituitary gland | 4.09e-11 | 2 |
exocrine gland | 1.04e-10 | 31 |
exocrine system | 1.04e-10 | 31 |
gland | 1.44e-08 | 59 |
dense regular connective tissue | 7.26e-08 | 3 |
tendon | 7.26e-08 | 3 |
regular connective tissue | 7.26e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.