FFCP PHASE1:Hg19::chr11:116257171..116257202,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C45|description=CAGE_peak_at_chr11:116257171..116257202,-|id=chr11:116257171..116257202,-|ontology_enrichment_celltype=CL:0002322!1.24e-36!5;CL:0000039!1.76e-17!7;CL:0000586!1.76e-17!7;CL:0000312!3.39e-13!5;CL:0000240!4.35e-11!6;CL:0000311!4.35e-11!6;CL:0000079!4.35e-11!6;CL:0000237!4.35e-11!6;CL:0000036!4.35e-11!6;CL:0000357!4.35e-11!6;CL:0000114!4.35e-11!6;CL:0000362!1.93e-08!8;CL:0000221!3.82e-08!71;CL:0002077!2.40e-07!33;CL:0000148!3.54e-07!10;CL:0000541!3.54e-07!10|ontology_enrichment_celltype_v019=CL:0000039;1.21e-64;7!CL:0000586;1.21e-64;7!CL:0002322;1.61e-23;5!CL:0002321;1.59e-08;15|ontology_enrichment_celltype_v019_2=CL:0000039,8.06e-65,7;CL:0000586,8.06e-65,7;CL:0002322,2.54e-23,5|ontology_enrichment_development_v019=UBERON:0009117;1.67e-45;10!UBERON:0005564;1.67e-45;10|ontology_enrichment_disease=DOID:3095!2.98e-08!22;DOID:2994!2.98e-08!22|ontology_enrichment_disease_v019=DOID:3095;4.49e-21;22!DOID:2994;4.49e-21;22|ontology_enrichment_disease_v019_2=DOID:3095,3.95e-21,22;DOID:2994,3.95e-21,22|ontology_enrichment_uberon=UBERON:0000473!2.56e-15!8;UBERON:0003135!3.52e-11!11;UBERON:0000200!5.75e-11!6;UBERON:0002771!3.47e-10!3;UBERON:0000991!1.17e-08!21;UBERON:0009196!1.17e-08!21;UBERON:0009117!1.17e-08!21;UBERON:0005564!1.17e-08!21;UBERON:0007029!1.27e-08!1;UBERON:0007190!2.84e-08!1;UBERON:0001003!2.84e-08!14;UBERON:0007376!2.84e-08!14;UBERON:0007383!2.84e-08!14;UBERON:0004176!2.98e-08!22;UBERON:0002902!3.79e-08!1;UBERON:0009899!3.79e-08!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1|ontology_enrichment_uberon_v019=UBERON:0000473;1.13e-56;8!UBERON:0003135;1.93e-41;11!UBERON:0000991;4.78e-22;21!UBERON:0003101;4.49e-21;22!UBERON:0000079;4.49e-21;22!UBERON:0000922;9.46e-18;49!UBERON:0002323;5.82e-10;45!UBERON:0003133;3.02e-08;44|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.93e-57,8;UBERON:0003135,1.49e-41,11;UBERON:0000991,4.18e-22,21;UBERON:0009196,4.18e-22,21;UBERON:0009117,4.18e-22,21;UBERON:0005564,4.18e-22,21;UBERON:0004176,3.95e-21,22;UBERON:0003101,3.95e-21,22;UBERON:0000079,3.95e-21,22;UBERON:0002323,2.16e-10,46;UBERON:0003133,5.61e-10,48;UBERON:0004458,8.77e-10,49;UBERON:0003886,6.41e-09,54;UBERON:0005156,3.36e-08,59;UBERON:0000990,3.36e-08,59;UBERON:0002553,6.05e-08,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.397589304964456,0.580969714347592,1.14027160516907,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,1.93778776509765,1.3360870263278,5.05421947441647,1.25353769646188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:116257171..116257202,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr11:116257171..116257202,- | |||
|id=chr11:116257171..116257202,- | |||
|ontology_enrichment_celltype=CL:0002322!1.24e-36!5;CL:0000039!1.76e-17!7;CL:0000586!1.76e-17!7;CL:0000312!3.39e-13!5;CL:0000240!4.35e-11!6;CL:0000311!4.35e-11!6;CL:0000079!4.35e-11!6;CL:0000237!4.35e-11!6;CL:0000036!4.35e-11!6;CL:0000357!4.35e-11!6;CL:0000114!4.35e-11!6;CL:0000362!1.93e-08!8;CL:0000221!3.82e-08!71;CL:0002077!2.40e-07!33;CL:0000148!3.54e-07!10;CL:0000541!3.54e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.21e-64;7!CL:0000586;1.21e-64;7!CL:0002322;1.61e-23;5!CL:0002321;1.59e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.06e-65,7;CL:0000586,8.06e-65,7;CL:0002322,2.54e-23,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.67e-45;10!UBERON:0005564;1.67e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!2.98e-08!22;DOID:2994!2.98e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.49e-21;22!DOID:2994;4.49e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.95e-21,22;DOID:2994,3.95e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.56e-15!8;UBERON:0003135!3.52e-11!11;UBERON:0000200!5.75e-11!6;UBERON:0002771!3.47e-10!3;UBERON:0000991!1.17e-08!21;UBERON:0009196!1.17e-08!21;UBERON:0009117!1.17e-08!21;UBERON:0005564!1.17e-08!21;UBERON:0007029!1.27e-08!1;UBERON:0007190!2.84e-08!1;UBERON:0001003!2.84e-08!14;UBERON:0007376!2.84e-08!14;UBERON:0007383!2.84e-08!14;UBERON:0004176!2.98e-08!22;UBERON:0002902!3.79e-08!1;UBERON:0009899!3.79e-08!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.13e-56;8!UBERON:0003135;1.93e-41;11!UBERON:0000991;4.78e-22;21!UBERON:0003101;4.49e-21;22!UBERON:0000079;4.49e-21;22!UBERON:0000922;9.46e-18;49!UBERON:0002323;5.82e-10;45!UBERON:0003133;3.02e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.93e-57,8;UBERON:0003135,1.49e-41,11;UBERON:0000991,4.18e-22,21;UBERON:0009196,4.18e-22,21;UBERON:0009117,4.18e-22,21;UBERON:0005564,4.18e-22,21;UBERON:0004176,3.95e-21,22;UBERON:0003101,3.95e-21,22;UBERON:0000079,3.95e-21,22;UBERON:0002323,2.16e-10,46;UBERON:0003133,5.61e-10,48;UBERON:0004458,8.77e-10,49;UBERON:0003886,6.41e-09,54;UBERON:0005156,3.36e-08,59;UBERON:0000990,3.36e-08,59;UBERON:0002553,6.05e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.397589304964456,0.580969714347592,1.14027160516907,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,1.93778776509765,1.3360870263278,5.05421947441647,1.25353769646188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116257171..116257202,- | |||
}} |
Revision as of 15:51, 10 September 2013
Short description: | p@chr11:116257171..116257202, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:116257171..116257202, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.06e-65 | 7 |
germ cell | 8.06e-65 | 7 |
embryonic stem cell | 2.54e-23 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 7.93e-57 | 8 |
male reproductive organ | 1.49e-41 | 11 |
gonad | 4.18e-22 | 21 |
indifferent external genitalia | 4.18e-22 | 21 |
indifferent gonad | 4.18e-22 | 21 |
gonad primordium | 4.18e-22 | 21 |
external genitalia | 3.95e-21 | 22 |
male organism | 3.95e-21 | 22 |
male reproductive system | 3.95e-21 | 22 |
body cavity | 2.16e-10 | 46 |
reproductive organ | 5.61e-10 | 48 |
body cavity or lining | 8.77e-10 | 49 |
body cavity precursor | 6.41e-09 | 54 |
reproductive structure | 3.36e-08 | 59 |
reproductive system | 3.36e-08 | 59 |
anatomical cavity | 6.05e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.95e-21 | 22 |
germ cell cancer | 3.95e-21 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.