FFCP PHASE1:Hg19::chr11:118306713..118306716,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118306713..118306716,-|id=chr11:118306713..118306716,-|ontology_enrichment_celltype=CL:0000838!9.61e-08!52;CL:0000542!1.71e-07!53;CL:0000051!1.71e-07!53|ontology_enrichment_celltype_v019=CL:0002593;1.14e-13;2|ontology_enrichment_celltype_v019_2=CL:0002593,1.21e-13,2|ontology_enrichment_development_v019=UBERON:0006215;2.14e-74;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.23e-12!57;UBERON:0005068!8.23e-12!57;UBERON:0006241!8.23e-12!57;UBERON:0007135!8.23e-12!57;UBERON:0002616!3.69e-11!59;UBERON:0002619!3.80e-11!22;UBERON:0001950!5.73e-11!20;UBERON:0000956!9.56e-11!25;UBERON:0000203!9.56e-11!25;UBERON:0001017!1.29e-10!82;UBERON:0002020!2.10e-10!34;UBERON:0003528!2.10e-10!34;UBERON:0002780!2.83e-10!41;UBERON:0001890!2.83e-10!41;UBERON:0006240!2.83e-10!41;UBERON:0000955!3.43e-10!69;UBERON:0006238!3.43e-10!69;UBERON:0003080!6.69e-10!42;UBERON:0005743!1.01e-09!86;UBERON:0000073!1.73e-09!94;UBERON:0001016!1.73e-09!94;UBERON:0001869!8.19e-09!32;UBERON:0002791!2.01e-08!33;UBERON:0001893!4.67e-08!34;UBERON:0002346!1.64e-07!90;UBERON:0003075!2.01e-07!86;UBERON:0007284!2.01e-07!86;UBERON:0000025!3.44e-07!194|ontology_enrichment_uberon_v019=UBERON:0002037;1.04e-37;6!UBERON:0002680;1.92e-25;9!UBERON:0001895;1.92e-25;9!UBERON:0004733;2.73e-19;12!UBERON:0002028;2.73e-19;12!UBERON:0004732;7.21e-18;13!UBERON:0002702;1.14e-13;2!UBERON:0002456;1.14e-13;2!UBERON:0001870;1.47e-09;3!UBERON:0000073;2.54e-07;53!UBERON:0002616;2.54e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.10e-38,6;UBERON:0006215,8.10e-38,6;UBERON:0002680,1.63e-25,9;UBERON:0001895,1.63e-25,9;UBERON:0010092,1.63e-25,9;UBERON:0004733,2.41e-19,12;UBERON:0002028,2.41e-19,12;UBERON:0007277,2.41e-19,12;UBERON:0004732,6.43e-18,13;UBERON:0003076,1.24e-15,15;UBERON:0003057,1.24e-15,15;UBERON:0002456,1.21e-13,2;UBERON:0002702,1.55e-13,2;UBERON:0000073,1.06e-11,53;UBERON:0002616,1.06e-11,53;UBERON:0001049,4.24e-11,56;UBERON:0005068,4.24e-11,56;UBERON:0006241,4.24e-11,56;UBERON:0007135,4.24e-11,56;UBERON:0001870,1.81e-09,3;UBERON:0000955,4.45e-09,68;UBERON:0006238,4.45e-09,68;UBERON:0000025,3.49e-08,192;UBERON:0001017,1.11e-07,81;UBERON:0003075,1.11e-07,82;UBERON:0007284,1.11e-07,82;UBERON:0002346,2.46e-07,86;UBERON:0001016,6.05e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0.256686072559497,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0.361789315876224,1.52581736317083,3.20679853800551,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0.14405479798815,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:118306713..118306716,- | |||
|id=chr11:118306713..118306716,- | |||
|ontology_enrichment_celltype=CL:0000838!9.61e-08!52;CL:0000542!1.71e-07!53;CL:0000051!1.71e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002593;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.21e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.14e-74;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.23e-12!57;UBERON:0005068!8.23e-12!57;UBERON:0006241!8.23e-12!57;UBERON:0007135!8.23e-12!57;UBERON:0002616!3.69e-11!59;UBERON:0002619!3.80e-11!22;UBERON:0001950!5.73e-11!20;UBERON:0000956!9.56e-11!25;UBERON:0000203!9.56e-11!25;UBERON:0001017!1.29e-10!82;UBERON:0002020!2.10e-10!34;UBERON:0003528!2.10e-10!34;UBERON:0002780!2.83e-10!41;UBERON:0001890!2.83e-10!41;UBERON:0006240!2.83e-10!41;UBERON:0000955!3.43e-10!69;UBERON:0006238!3.43e-10!69;UBERON:0003080!6.69e-10!42;UBERON:0005743!1.01e-09!86;UBERON:0000073!1.73e-09!94;UBERON:0001016!1.73e-09!94;UBERON:0001869!8.19e-09!32;UBERON:0002791!2.01e-08!33;UBERON:0001893!4.67e-08!34;UBERON:0002346!1.64e-07!90;UBERON:0003075!2.01e-07!86;UBERON:0007284!2.01e-07!86;UBERON:0000025!3.44e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.04e-37;6!UBERON:0002680;1.92e-25;9!UBERON:0001895;1.92e-25;9!UBERON:0004733;2.73e-19;12!UBERON:0002028;2.73e-19;12!UBERON:0004732;7.21e-18;13!UBERON:0002702;1.14e-13;2!UBERON:0002456;1.14e-13;2!UBERON:0001870;1.47e-09;3!UBERON:0000073;2.54e-07;53!UBERON:0002616;2.54e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.10e-38,6;UBERON:0006215,8.10e-38,6;UBERON:0002680,1.63e-25,9;UBERON:0001895,1.63e-25,9;UBERON:0010092,1.63e-25,9;UBERON:0004733,2.41e-19,12;UBERON:0002028,2.41e-19,12;UBERON:0007277,2.41e-19,12;UBERON:0004732,6.43e-18,13;UBERON:0003076,1.24e-15,15;UBERON:0003057,1.24e-15,15;UBERON:0002456,1.21e-13,2;UBERON:0002702,1.55e-13,2;UBERON:0000073,1.06e-11,53;UBERON:0002616,1.06e-11,53;UBERON:0001049,4.24e-11,56;UBERON:0005068,4.24e-11,56;UBERON:0006241,4.24e-11,56;UBERON:0007135,4.24e-11,56;UBERON:0001870,1.81e-09,3;UBERON:0000955,4.45e-09,68;UBERON:0006238,4.45e-09,68;UBERON:0000025,3.49e-08,192;UBERON:0001017,1.11e-07,81;UBERON:0003075,1.11e-07,82;UBERON:0007284,1.11e-07,82;UBERON:0002346,2.46e-07,86;UBERON:0001016,6.05e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0.256686072559497,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0.361789315876224,1.52581736317083,3.20679853800551,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,2.32991899054908,0.157566364614447,0.0824158583811665,0.26961417541674,0,0.254019996197353,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,1.001527445652,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0.553033744606923,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0.567515953566836,0,0,0,0,0.107824811396682,0,0.764467467344097,0,0,0.619678821295011,0,0,0.0788617450012534,0,0,0,0,0,0.478901577171454,0,1.00828678488687,0.207471757392654,0.645902582527404,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0.781078098613847,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0.576169937778896,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0.659643100472575,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.126166424835079,0.218531143927391,0.380095503034311,0,0,0.18378979906969,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0.129177819672012,0.744896571550295,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:118306713..118306716,- | |||
}} |
Revision as of 16:02, 10 September 2013
Short description: | p@chr11:118306713..118306716, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118306713..118306716, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.10e-38 | 6 |
rhombic lip | 8.10e-38 | 6 |
regional part of metencephalon | 1.63e-25 | 9 |
metencephalon | 1.63e-25 | 9 |
future metencephalon | 1.63e-25 | 9 |
segmental subdivision of hindbrain | 2.41e-19 | 12 |
hindbrain | 2.41e-19 | 12 |
presumptive hindbrain | 2.41e-19 | 12 |
segmental subdivision of nervous system | 6.43e-18 | 13 |
posterior neural tube | 1.24e-15 | 15 |
chordal neural plate | 1.24e-15 | 15 |
internal thoracic artery | 1.21e-13 | 2 |
middle frontal gyrus | 1.55e-13 | 2 |
regional part of nervous system | 1.06e-11 | 53 |
regional part of brain | 1.06e-11 | 53 |
neural tube | 4.24e-11 | 56 |
neural rod | 4.24e-11 | 56 |
future spinal cord | 4.24e-11 | 56 |
neural keel | 4.24e-11 | 56 |
frontal cortex | 1.81e-09 | 3 |
brain | 4.45e-09 | 68 |
future brain | 4.45e-09 | 68 |
tube | 3.49e-08 | 192 |
central nervous system | 1.11e-07 | 81 |
neural plate | 1.11e-07 | 82 |
presumptive neural plate | 1.11e-07 | 82 |
neurectoderm | 2.46e-07 | 86 |
nervous system | 6.05e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.