FFCP PHASE1:Hg19::chr11:19456412..19456413,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C30|description=CAGE_peak_at_chr11:19456412..19456413,+|id=chr11:19456412..19456413,+|ontology_enrichment_celltype=CL:0000188!1.30e-09!9;CL:0000594!8.04e-07!3|ontology_enrichment_celltype_v019=CL:0002561;1.07e-13;2!CL:0000594;1.41e-09;3|ontology_enrichment_celltype_v019_2=CL:0002561,9.40e-14,2;CL:0000594,1.19e-09,3|ontology_enrichment_development_v019=UBERON:0005754;5.92e-26;1!UBERON:0007297;1.07e-13;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.07e-13;2!DOID:5409;1.69e-07;4|ontology_enrichment_disease_v019_2=DOID:3307,7.30e-14,2;DOID:5409,2.04e-07,4|ontology_enrichment_uberon=UBERON:0001049!9.28e-19!57;UBERON:0005068!9.28e-19!57;UBERON:0006241!9.28e-19!57;UBERON:0007135!9.28e-19!57;UBERON:0002780!1.60e-16!41;UBERON:0001890!1.60e-16!41;UBERON:0006240!1.60e-16!41;UBERON:0002616!1.77e-16!59;UBERON:0003080!5.61e-16!42;UBERON:0002020!1.90e-15!34;UBERON:0003528!1.90e-15!34;UBERON:0001893!2.24e-15!34;UBERON:0000955!6.29e-15!69;UBERON:0006238!6.29e-15!69;UBERON:0002791!1.73e-14!33;UBERON:0001017!2.85e-13!82;UBERON:0005743!2.88e-13!86;UBERON:0007023!4.08e-13!115;UBERON:0001869!4.58e-13!32;UBERON:0000073!6.15e-13!94;UBERON:0001016!6.15e-13!94;UBERON:0000475!6.92e-13!365;UBERON:0003075!1.72e-12!86;UBERON:0007284!1.72e-12!86;UBERON:0002346!1.53e-11!90;UBERON:0002308!2.22e-11!9;UBERON:0000125!2.22e-11!9;UBERON:0000153!1.10e-10!129;UBERON:0007811!1.10e-10!129;UBERON:0000483!2.03e-10!309;UBERON:0000033!3.76e-10!123;UBERON:0000119!3.78e-10!312;UBERON:0003056!4.31e-10!61;UBERON:0002619!5.10e-09!22;UBERON:0009663!7.14e-09!7;UBERON:0002420!8.73e-09!9;UBERON:0007245!8.73e-09!9;UBERON:0010009!8.73e-09!9;UBERON:0010011!8.73e-09!9;UBERON:0000454!8.73e-09!9;UBERON:0001950!1.25e-08!20;UBERON:0000481!3.12e-08!347;UBERON:0000064!3.52e-08!219;UBERON:0000956!1.25e-07!25;UBERON:0000203!1.25e-07!25;UBERON:0004121!9.33e-07!169|ontology_enrichment_uberon_v019=UBERON:0000998;5.92e-26;1!UBERON:0006868;5.92e-26;1!UBERON:0005933;1.07e-13;2!UBERON:0005942;1.07e-13;2!UBERON:0005932;1.07e-13;2!UBERON:0006947;1.41e-09;3!UBERON:0004054;1.41e-09;3!UBERON:0005904;1.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0005933,9.40e-14,2;UBERON:0005942,9.40e-14,2;UBERON:0005932,9.40e-14,2;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0005904,1.69e-07,4|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0,0,0,0.817309515567294,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.421352420106746,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.410952645100767,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.964856007391714,1.71872391789238,0.435050081742686,0.767039646744908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.60298219312704,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr11:19456412..19456413,+ | |||
|id=chr11:19456412..19456413,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.30e-09!9;CL:0000594!8.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.07e-13;2!CL:0000594;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,9.40e-14,2;CL:0000594,1.19e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.92e-26;1!UBERON:0007297;1.07e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.07e-13;2!DOID:5409;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.30e-14,2;DOID:5409,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.28e-19!57;UBERON:0005068!9.28e-19!57;UBERON:0006241!9.28e-19!57;UBERON:0007135!9.28e-19!57;UBERON:0002780!1.60e-16!41;UBERON:0001890!1.60e-16!41;UBERON:0006240!1.60e-16!41;UBERON:0002616!1.77e-16!59;UBERON:0003080!5.61e-16!42;UBERON:0002020!1.90e-15!34;UBERON:0003528!1.90e-15!34;UBERON:0001893!2.24e-15!34;UBERON:0000955!6.29e-15!69;UBERON:0006238!6.29e-15!69;UBERON:0002791!1.73e-14!33;UBERON:0001017!2.85e-13!82;UBERON:0005743!2.88e-13!86;UBERON:0007023!4.08e-13!115;UBERON:0001869!4.58e-13!32;UBERON:0000073!6.15e-13!94;UBERON:0001016!6.15e-13!94;UBERON:0000475!6.92e-13!365;UBERON:0003075!1.72e-12!86;UBERON:0007284!1.72e-12!86;UBERON:0002346!1.53e-11!90;UBERON:0002308!2.22e-11!9;UBERON:0000125!2.22e-11!9;UBERON:0000153!1.10e-10!129;UBERON:0007811!1.10e-10!129;UBERON:0000483!2.03e-10!309;UBERON:0000033!3.76e-10!123;UBERON:0000119!3.78e-10!312;UBERON:0003056!4.31e-10!61;UBERON:0002619!5.10e-09!22;UBERON:0009663!7.14e-09!7;UBERON:0002420!8.73e-09!9;UBERON:0007245!8.73e-09!9;UBERON:0010009!8.73e-09!9;UBERON:0010011!8.73e-09!9;UBERON:0000454!8.73e-09!9;UBERON:0001950!1.25e-08!20;UBERON:0000481!3.12e-08!347;UBERON:0000064!3.52e-08!219;UBERON:0000956!1.25e-07!25;UBERON:0000203!1.25e-07!25;UBERON:0004121!9.33e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.92e-26;1!UBERON:0006868;5.92e-26;1!UBERON:0005933;1.07e-13;2!UBERON:0005942;1.07e-13;2!UBERON:0005932;1.07e-13;2!UBERON:0006947;1.41e-09;3!UBERON:0004054;1.41e-09;3!UBERON:0005904;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0005933,9.40e-14,2;UBERON:0005942,9.40e-14,2;UBERON:0005932,9.40e-14,2;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0005904,1.69e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0,0,0,0.817309515567294,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.421352420106746,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.410952645100767,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.964856007391714,1.71872391789238,0.435050081742686,0.767039646744908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.60298219312704,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,1.01651473835064,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0.476128862927481,0,0,0,0.0636471582781649,7.47833599145411,0,0,0,0.143444410785353,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:19456412..19456413,+ | |||
}} |
Revision as of 17:05, 10 September 2013
Short description: | p@chr11:19456412..19456413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:19456412..19456413, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 9.40e-14 | 2 |
skeletal muscle satellite cell | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
hair root sheath | 9.40e-14 | 2 |
hair outer root sheath | 9.40e-14 | 2 |
bulb of hair follicle | 9.40e-14 | 2 |
male genital duct | 1.41e-09 | 3 |
internal male genitalia | 1.41e-09 | 3 |
duct of male reproductive system | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.30e-14 | 2 |
lung small cell carcinoma | 2.04e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.