FFCP PHASE1:Hg19::chr11:5255807..5255826,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3045|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4829|TSSclassifier=S|UniProt=A0N071,P02042|association_with_transcript=31bp_to_NM_000519,uc001maf.1_5end|coexpression_cluster_id=C33|description=CAGE_peak_4_at_HBD_5end|id=chr11:5255807..5255826,-|ontology_enrichment_celltype=CL:0000764!6.22e-11!2;CL:0000765!6.22e-11!2;CL:0000050!6.22e-11!2;CL:0000038!6.22e-11!2;CL:0000558!6.22e-11!2;CL:0000547!6.22e-11!2;CL:0000549!6.22e-11!2;CL:0000550!6.22e-11!2;CL:0000552!6.22e-11!2|ontology_enrichment_celltype_v019=CL:0000764;3.14e-28;2!CL:0000558;3.14e-28;2|ontology_enrichment_celltype_v019_2=CL:0000764,3.14e-28,2;CL:0000765,3.14e-28,2;CL:0000050,3.14e-28,2;CL:0000038,3.14e-28,2;CL:0000558,3.14e-28,2;CL:0000547,3.14e-28,2;CL:0000549,3.14e-28,2;CL:0000550,3.14e-28,2;CL:0000552,3.14e-28,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!5.10e-08!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.29e-19!15;UBERON:0000179!2.29e-19!15;UBERON:0000463!2.29e-19!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-55;15!UBERON:0000179;1.41e-55;15!UBERON:0000463;1.41e-55;15!UBERON:0002390;2.47e-24;32!UBERON:0002193;5.30e-14;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.22e-55,15;UBERON:0000179,1.22e-55,15;UBERON:0000463,1.22e-55,15;UBERON:0007023,1.35e-10,114;UBERON:0002390,7.90e-08,98;UBERON:0003061,7.90e-08,98;UBERON:0004535,4.92e-07,109;UBERON:0002193,4.92e-07,108;UBERON:0001009,8.00e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,167.73380563414,186.664912031779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,6.117097657139,5.12682468456746,3.33524485640905,2.46817363851717,5.18778648954174,5.40031437238115,11.8968776444141,0,0,0,0,0,0,0,0.199579371432817,1.1490322207942,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.19606253431774,0,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,48.0805399444524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@HBD}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4829 | |||
|TSSclassifier=S | |||
|UniProt=A0N071,P02042 | |||
|association_with_transcript=31bp_to_NM_000519,uc001maf.1_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_4_at_HBD_5end | |||
|id=chr11:5255807..5255826,- | |||
|ontology_enrichment_celltype=CL:0000764!6.22e-11!2;CL:0000765!6.22e-11!2;CL:0000050!6.22e-11!2;CL:0000038!6.22e-11!2;CL:0000558!6.22e-11!2;CL:0000547!6.22e-11!2;CL:0000549!6.22e-11!2;CL:0000550!6.22e-11!2;CL:0000552!6.22e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.14e-28;2!CL:0000558;3.14e-28;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.14e-28,2;CL:0000765,3.14e-28,2;CL:0000050,3.14e-28,2;CL:0000038,3.14e-28,2;CL:0000558,3.14e-28,2;CL:0000547,3.14e-28,2;CL:0000549,3.14e-28,2;CL:0000550,3.14e-28,2;CL:0000552,3.14e-28,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.10e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.29e-19!15;UBERON:0000179!2.29e-19!15;UBERON:0000463!2.29e-19!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-55;15!UBERON:0000179;1.41e-55;15!UBERON:0000463;1.41e-55;15!UBERON:0002390;2.47e-24;32!UBERON:0002193;5.30e-14;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.22e-55,15;UBERON:0000179,1.22e-55,15;UBERON:0000463,1.22e-55,15;UBERON:0007023,1.35e-10,114;UBERON:0002390,7.90e-08,98;UBERON:0003061,7.90e-08,98;UBERON:0004535,4.92e-07,109;UBERON:0002193,4.92e-07,108;UBERON:0001009,8.00e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,167.73380563414,186.664912031779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,6.117097657139,5.12682468456746,3.33524485640905,2.46817363851717,5.18778648954174,5.40031437238115,11.8968776444141,0,0,0,0,0,0,0,0.199579371432817,1.1490322207942,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.19606253431774,0,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,48.0805399444524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@HBD | |||
}} |
Revision as of 18:05, 10 September 2013
Short description: | p4@HBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HBD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 31bp_to_NM_000519, uc001maf.1_5end |
EntrezGene: | HBD |
HGNC: | 4829 |
UniProt: | A0N071P02042 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.14e-28 | 2 |
erythroblast | 3.14e-28 | 2 |
megakaryocyte-erythroid progenitor cell | 3.14e-28 | 2 |
erythroid progenitor cell | 3.14e-28 | 2 |
reticulocyte | 3.14e-28 | 2 |
proerythroblast | 3.14e-28 | 2 |
basophilic erythroblast | 3.14e-28 | 2 |
polychromatophilic erythroblast | 3.14e-28 | 2 |
orthochromatic erythroblast | 3.14e-28 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.22e-55 | 15 |
haemolymphatic fluid | 1.22e-55 | 15 |
organism substance | 1.22e-55 | 15 |
adult organism | 1.35e-10 | 114 |
hematopoietic system | 7.90e-08 | 98 |
blood island | 7.90e-08 | 98 |
cardiovascular system | 4.92e-07 | 109 |
hemolymphoid system | 4.92e-07 | 108 |
circulatory system | 8.00e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.