FFCP PHASE1:Hg19::chr11:63381642..63381653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11145|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17825|TSSclassifier=S|UniProt=|association_with_transcript=-12bp_to_ENST00000394613_5end|coexpression_cluster_id=C220|description=CAGE_peak_11_at_PLA2G16_5end|id=chr11:63381642..63381653,-|ontology_enrichment_celltype=CL:0000136!8.72e-13!15|ontology_enrichment_celltype_v019=CL:0000136;1.89e-47;13!CL:0002615;1.15e-19;3!CL:0002541;8.58e-19;3!CL:0002521;1.30e-09;3|ontology_enrichment_celltype_v019_2=CL:0000136,6.89e-41,15;CL:0002615,1.15e-19,3;CL:0002541,1.44e-18,3;CL:0002521,1.30e-09,3|ontology_enrichment_development_v019=UBERON:0000358;1.72e-07;1!UBERON:0010226;1.72e-07;1!UBERON:0010227;3.30e-07;1!UBERON:0006242;3.30e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.99e-13!115;UBERON:0001737!3.82e-11!9;UBERON:0001557!4.54e-09!19|ontology_enrichment_uberon_v019=UBERON:0003124;8.58e-19;3!UBERON:0000920;8.58e-19;3!UBERON:0004151;1.63e-18;3!UBERON:0002081;9.54e-13;2!UBERON:0003688;4.33e-10;6!UBERON:0002358;4.33e-10;6!UBERON:0003684;4.33e-10;6!UBERON:0001178;4.33e-10;6!UBERON:0002190;1.30e-09;3!UBERON:0007100;5.05e-08;25!UBERON:0002084;1.72e-07;1!UBERON:0002082;1.72e-07;1!UBERON:0002079;3.30e-07;1!UBERON:0002134;3.30e-07;1!UBERON:0005208;3.30e-07;1!UBERON:0004145;3.30e-07;1!UBERON:0005946;3.30e-07;1!UBERON:0005965;3.30e-07;1!UBERON:0002078;3.30e-07;1!UBERON:0004457;7.24e-07;9!UBERON:0000042;7.24e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004151,9.42e-19,3;UBERON:0000920,1.44e-18,3;UBERON:0002081,6.64e-13,2;UBERON:0010227,6.64e-13,2;UBERON:0003688,4.34e-10,6;UBERON:0002358,4.34e-10,6;UBERON:0003684,4.34e-10,6;UBERON:0001178,4.34e-10,6;UBERON:0002190,1.30e-09,3;UBERON:0003124,2.96e-08,7;UBERON:0002084,1.42e-07,1;UBERON:0002082,1.42e-07,1;UBERON:0010226,1.42e-07,1;UBERON:0007100,2.06e-07,27;UBERON:0002134,2.66e-07,1;UBERON:0005208,2.66e-07,1;UBERON:0005946,2.66e-07,1;UBERON:0005965,2.66e-07,1;UBERON:0002078,2.66e-07,1;UBERON:0002079,2.83e-07,1|phase1_expression=0.181678379270557,30.6163749164106,3.80576891059122,3.00219895059391,11.1740273606822,0,45.5939780702959,0,5.74608382039645,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,1.56727360739044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,1.41968160047813,1.18009283054671,0.241011029883482,0.661763836394364,0.217879444092406,0.71181185733329,0.943819157121151,0.196221465125346,0.769494313892781,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0.614321404198464,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,2.23300811812344,1.09917112082235,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0.126621591911757,0.782205530939212,0,1.06726497369676,0.39961921916426,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.687481272035051,1.43574604915363,0.199679000498991,1.28767814440971,1.33902874465124,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,2.07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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17825 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000394613_5end | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_11_at_PLA2G16_5end | |||
|id=chr11:63381642..63381653,- | |||
|ontology_enrichment_celltype=CL:0000136!8.72e-13!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-47;13!CL:0002615;1.15e-19;3!CL:0002541;8.58e-19;3!CL:0002521;1.30e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.89e-41,15;CL:0002615,1.15e-19,3;CL:0002541,1.44e-18,3;CL:0002521,1.30e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.72e-07;1!UBERON:0010226;1.72e-07;1!UBERON:0010227;3.30e-07;1!UBERON:0006242;3.30e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.99e-13!115;UBERON:0001737!3.82e-11!9;UBERON:0001557!4.54e-09!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.58e-19;3!UBERON:0000920;8.58e-19;3!UBERON:0004151;1.63e-18;3!UBERON:0002081;9.54e-13;2!UBERON:0003688;4.33e-10;6!UBERON:0002358;4.33e-10;6!UBERON:0003684;4.33e-10;6!UBERON:0001178;4.33e-10;6!UBERON:0002190;1.30e-09;3!UBERON:0007100;5.05e-08;25!UBERON:0002084;1.72e-07;1!UBERON:0002082;1.72e-07;1!UBERON:0002079;3.30e-07;1!UBERON:0002134;3.30e-07;1!UBERON:0005208;3.30e-07;1!UBERON:0004145;3.30e-07;1!UBERON:0005946;3.30e-07;1!UBERON:0005965;3.30e-07;1!UBERON:0002078;3.30e-07;1!UBERON:0004457;7.24e-07;9!UBERON:0000042;7.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,9.42e-19,3;UBERON:0000920,1.44e-18,3;UBERON:0002081,6.64e-13,2;UBERON:0010227,6.64e-13,2;UBERON:0003688,4.34e-10,6;UBERON:0002358,4.34e-10,6;UBERON:0003684,4.34e-10,6;UBERON:0001178,4.34e-10,6;UBERON:0002190,1.30e-09,3;UBERON:0003124,2.96e-08,7;UBERON:0002084,1.42e-07,1;UBERON:0002082,1.42e-07,1;UBERON:0010226,1.42e-07,1;UBERON:0007100,2.06e-07,27;UBERON:0002134,2.66e-07,1;UBERON:0005208,2.66e-07,1;UBERON:0005946,2.66e-07,1;UBERON:0005965,2.66e-07,1;UBERON:0002078,2.66e-07,1;UBERON:0002079,2.83e-07,1 | |||
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|short_description=p11@PLA2G16 | |||
}} |
Revision as of 18:39, 10 September 2013
Short description: | p11@PLA2G16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PLA2G16_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -12bp_to_ENST00000394613_5end |
EntrezGene: | PLA2G16 |
HGNC: | 17825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.89e-41 | 15 |
adipocyte of omentum tissue | 1.15e-19 | 3 |
chorionic membrane mesenchymal stem cell | 1.44e-18 | 3 |
subcutaneous fat cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 9.42e-19 | 3 |
egg chorion | 1.44e-18 | 3 |
cardiac atrium | 6.64e-13 | 2 |
future cardiac atrium | 6.64e-13 | 2 |
omentum | 4.34e-10 | 6 |
peritoneum | 4.34e-10 | 6 |
abdominal cavity | 4.34e-10 | 6 |
visceral peritoneum | 4.34e-10 | 6 |
subcutaneous adipose tissue | 1.30e-09 | 3 |
chorion | 2.96e-08 | 7 |
heart left ventricle | 1.42e-07 | 1 |
cardiac ventricle | 1.42e-07 | 1 |
future cardiac ventricle | 1.42e-07 | 1 |
primary circulatory organ | 2.06e-07 | 27 |
tricuspid valve | 2.66e-07 | 1 |
right atrium valve | 2.66e-07 | 1 |
outflow tract of atrium | 2.66e-07 | 1 |
outflow part of right atrium | 2.66e-07 | 1 |
right cardiac atrium | 2.66e-07 | 1 |
left cardiac atrium | 2.83e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.