FFCP PHASE1:Hg19::chr11:67070950..67070963,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54961|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30581|TSSclassifier=S|UniProt=C9JUG3|association_with_transcript=0bp_to_ENST00000308298_5end|description=CAGE_peak_2_at_SSH3_5end|id=chr11:67070950..67070963,+|ontology_enrichment_celltype=CL:0000066!1.88e-19!254;CL:0002076!4.57e-11!43;CL:0000223!8.72e-09!59;CL:0002321!3.41e-07!248;CL:0000220!8.87e-07!246|ontology_enrichment_celltype_v019=CL:0002076;2.46e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,2.29e-13,253;CL:0002076,1.85e-09,42;CL:0000223,2.69e-08,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!9.35e-10!143;DOID:305!2.54e-09!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,9.69e-08,143|ontology_enrichment_uberon=UBERON:0000464!6.25e-08!104|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.642301571672949,0.281908808191942,0,0.893922188854576,0,0,0.631719873426831,1.04474251279935,0.982935746006035,0.697801167972428,0.655324116390517,1.05506791291381,1.23766352960047,1.32558950291166,0.672325146451775,0.602694528023977,0,0.487932798790507,0.492484232307152,0.204000691244253,1.88072832886853,0,0.273748850145768,0.376627918784408,0,0,0,1.18009283054671,0,0.154816123316076,0.919421224478927,3.0120591877825,5.9160641626686,0,0,0.587200878669695,0.553995408531877,0.200544447470142,0,0.447830948479849,0,0,0.436194716338694,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.526768169550154,0.786839080455332,1.17903228824749,1.43921049299656,0.334372990781356,0.651844533267181,0.946895611469467,0,0.668462741311041,1.17842362989935,1.77227115666897,2.70803863765016,0.768547918354051,0.780356085359269,0.328875809207352,0.276350017785848,0.579606171470105,0.444859689486181,0.535081656179426,0,0.339928028092699,0,0.68725489096526,0.253019692019503,2.22995790026868,0.651083453856419,1.90090408889675,1.35517607169996,0.511946444617674,0,0.473554504088034,1.64225599384209,0.80642697289893,0.534880391567015,0.868946423296794,2.43806866313962,0,0.895037932904712,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,1.13441780596881,0.886917589850256,0.527008714158756,1.0478326039817,4.37154345951051,1.48313777113772,1.62273696827342,0.696518949197069,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0.596287222100115,0,0.694281003215189,0.56530794192401,0,0,0.208994966536811,1.55050055501597,0.71153252537342,0.66944122552934,1.20848795132744,1.52054421143703,1.22031028774085,0,0,0.446498641420399,0,0.337834441449967,3.06633274931766,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.12663051166458,1.05927344650575,0,0.709336764396714,0,0,0.74000264525148,0.311211035399766,0.404132016209064,0.326923806226917,0.454072282934794,1.15235184896,0.70296429550139,0.312160076830321,0.570471821544449,1.19558944441441,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.61417158655884,0.619954687054593,0,0,2.73048408581408,2.87447256726495,0.336672227908132,0.125118519871964,0.831192346452549,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0.640672166455702,0.423863802319124,0.300091096084402,0.721367704669072,0.515281080091258,0.744467425326359,0,0.0974370051611986,0.757301322732344,0.736399189138395,1.77810662500693,0.710019185033229,0.201504196455281,0,1.54608682530637,0.818238361772504,2.86804595389004,2.43947412259191,1.32529768321485,2.09149097165133,0.829288440122964,2.27088765788066,0.36497735907583,1.56449532329816,0,1.38134921352481,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0.964044119533928,0.55146986366197,0.217879444092406,0,0.269662616320329,0.588664395376038,0,0.738155454624648,0,1.2347220339942,2.94017422771084,0,0,0.590789906681404,0,1.10689594688802,0.857839051492628,1.86575485194663,3.37205259772859,1.20634766893957,0.740707561268237,0.325808305310325,0,1.44331342025273,1.62302566965108,0.70445216541493,0.288732895522148,0.925971025153221,0.761016608938393,0.790204397959275,5.15091697256924,0.492434012174795,0,0.148631162288728,0.93733833986777,0.839910640994298,1.41775097242386,1.16426079513703,1.45316969256981,3.4504441124869,0,0.528290604079356,0.414656231081544,0.288239906833923,0.88369703398466,0.190493682876507,1.52795370223311,1.17217447210047,0,0.205654985406647,0,0.857479297891735,0,0,0,0.646358578788889,0,0,1.06375246633948,0,0.514414748524284,0,0.532844358032199,0,1.62786481617433,0,0.977208552881205,1.06617584622764,0,0.904318131178758,0.871533458600294,0.499864955910285,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.821905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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54961 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30581 | |||
|TSSclassifier=S | |||
|UniProt=C9JUG3 | |||
|association_with_transcript=0bp_to_ENST00000308298_5end | |||
|description=CAGE_peak_2_at_SSH3_5end | |||
|id=chr11:67070950..67070963,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.88e-19!254;CL:0002076!4.57e-11!43;CL:0000223!8.72e-09!59;CL:0002321!3.41e-07!248;CL:0000220!8.87e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.46e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.29e-13,253;CL:0002076,1.85e-09,42;CL:0000223,2.69e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.35e-10!143;DOID:305!2.54e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.69e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!6.25e-08!104 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SSH3 | |||
}} |
Revision as of 19:14, 10 September 2013
Short description: | p2@SSH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SSH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308298_5end |
EntrezGene: | SSH3 |
HGNC: | 30581 |
UniProt: | C9JUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.29e-13 | 253 |
endo-epithelial cell | 1.85e-09 | 42 |
endodermal cell | 2.69e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.69e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.